RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 C20orf202A1L168 122 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 NPC2P61916 151 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 HIST3H2BBQ8N257 126 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
SYNE2-226ENST00000557084 C3orf79P0CE67 100 aa7.02□□□□□ -1.29
SYNE2-226ENST00000557084 KRTAP4-12Q9BQ66 201 aa7.02□□□□□ -1.29
SYNE2-226ENST00000557084 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
SYNE2-226ENST00000557084 NDUFC2O95298 119 aa7.01□□□□□ -1.29
SYNE2-226ENST00000557084 KRTAP13-2Q52LG2 175 aa7.01□□□□□ -1.29
SYNE2-226ENST00000557084 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
SYNE2-226ENST00000557084 SPRR1AP35321 89 aa7□□□□□ -1.29
SYNE2-226ENST00000557084 ADAMTSL4-AS1Q5T5F5 129 aa7□□□□□ -1.29
SYNE2-226ENST00000557084 SVIPQ8NHG7 77 aa7□□□□□ -1.29
SYNE2-226ENST00000557084 SPRR4Q96PI1 79 aa7□□□□□ -1.29
SYNE2-226ENST00000557084 S100A6P06703 90 aa6.99□□□□□ -1.29
SYNE2-226ENST00000557084 SNRPEP62304 92 aaKnown RBP6.99□□□□□ -1.29
SYNE2-226ENST00000557084 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
SYNE2-226ENST00000557084 SMCR5Q8TEV8 140 aa6.99□□□□□ -1.29
SYNE2-226ENST00000557084 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
SYNE2-226ENST00000557084 CBY1Q9Y3M2 126 aa6.99□□□□□ -1.29
SYNE2-226ENST00000557084 C5orf52A6NGY3 159 aa6.98□□□□□ -1.29
SYNE2-226ENST00000557084 TIMM17BO60830 172 aa6.98□□□□□ -1.29
SYNE2-226ENST00000557084 TRAV23DV6A0A075B6W5 121 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 B5MCH6 92 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 HINT1P49773 126 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-226ENST00000557084 AKR1D1P51857 326 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-226ENST00000557084 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 SCGB1D4Q6XE38 83 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 OR13C6PQ8NH95 151 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 LINC00308Q8TCZ7 52 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 PPDPFQ9H3Y8 114 aa6.97□□□□□ -1.29
SYNE2-226ENST00000557084 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-226ENST00000557084 S100A2P29034 98 aa6.96□□□□□ -1.3
SYNE2-226ENST00000557084 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
SYNE2-226ENST00000557084 C3orf22Q8N5N4 141 aa6.96□□□□□ -1.3
SYNE2-226ENST00000557084 SPANXCQ9NY87 97 aa6.96□□□□□ -1.3
SYNE2-226ENST00000557084 LPAP08519 4548 aa6.96□□□□□ -1.3
SYNE2-226ENST00000557084 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-226ENST00000557084 Q6ZRX8 168 aa6.95□□□□□ -1.3
SYNE2-226ENST00000557084 TTTY13Q9BZ97 58 aa6.95□□□□□ -1.3
SYNE2-226ENST00000557084 ATOH7Q8N100 152 aa6.94□□□□□ -1.3
SYNE2-226ENST00000557084 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
SYNE2-226ENST00000557084 LITAFQ99732 161 aa6.94□□□□□ -1.3
SYNE2-226ENST00000557084 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
SYNE2-226ENST00000557084 ERC2-IT1O76042 136 aa6.92□□□□□ -1.3
SYNE2-226ENST00000557084 LINC00518Q8N0U6 118 aa6.92□□□□□ -1.3
SYNE2-226ENST00000557084 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
SYNE2-226ENST00000557084 Q9BRP9 147 aa6.92□□□□□ -1.3
SYNE2-226ENST00000557084 CTAG1AP78358 180 aa6.91□□□□□ -1.3
SYNE2-226ENST00000557084 Q8NBF4 154 aa6.91□□□□□ -1.3
SYNE2-226ENST00000557084 SPANXDQ9BXN6 97 aa6.91□□□□□ -1.3
SYNE2-226ENST00000557084 IGLV9-49A0A0B4J1Y8 123 aa6.9□□□□□ -1.3
SYNE2-226ENST00000557084 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
SYNE2-226ENST00000557084 LINC00483Q53H64 154 aa6.9□□□□□ -1.3
SYNE2-226ENST00000557084 LCE3BQ5TA77 95 aa6.9□□□□□ -1.3
SYNE2-226ENST00000557084 MOBPQ13875 183 aa6.89□□□□□ -1.31
SYNE2-226ENST00000557084 IFITM1P13164 125 aa6.88□□□□□ -1.31
SYNE2-226ENST00000557084 Q6ZVH6 145 aa6.88□□□□□ -1.31
SYNE2-226ENST00000557084 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
SYNE2-226ENST00000557084 DHRS4-AS1Q9P1J3 65 aa6.88□□□□□ -1.31
SYNE2-226ENST00000557084 IGLV7-46A0A075B6I9 117 aa6.87□□□□□ -1.31
SYNE2-226ENST00000557084 A6NDN8 102 aa6.87□□□□□ -1.31
SYNE2-226ENST00000557084 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
SYNE2-226ENST00000557084 SPINK1P00995 79 aa6.86□□□□□ -1.31
SYNE2-226ENST00000557084 COX7BP24311 80 aa6.86□□□□□ -1.31
SYNE2-226ENST00000557084 C6orf99Q4VX62 202 aa6.85□□□□□ -1.31
SYNE2-226ENST00000557084 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
SYNE2-226ENST00000557084 SSBP3-AS1Q7Z2R9 100 aa6.85□□□□□ -1.31
SYNE2-226ENST00000557084 MUSTN1Q8IVN3 82 aa6.85□□□□□ -1.31
SYNE2-226ENST00000557084 ST20-AS1Q8NBB2 130 aa6.85□□□□□ -1.31
SYNE2-226ENST00000557084 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
SYNE2-226ENST00000557084 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
SYNE2-226ENST00000557084 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
SYNE2-226ENST00000557084 ELOF1P60002 83 aaKnown RBP6.82□□□□□ -1.32
SYNE2-226ENST00000557084 TRBV7-6A0A0J9YX20 115 aa6.81□□□□□ -1.32
SYNE2-226ENST00000557084 TAL2Q16559 108 aa6.81□□□□□ -1.32
SYNE2-226ENST00000557084 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
SYNE2-226ENST00000557084 FP248Q71RG6 208 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-226ENST00000557084 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
SYNE2-226ENST00000557084 LAMTOR3Q9UHA4 124 aa6.81□□□□□ -1.32
SYNE2-226ENST00000557084 A0A1B0GWB2 263 aa6.8□□□□□ -1.32
SYNE2-226ENST00000557084 MUC2Q02817 5179 aa6.8□□□□□ -1.32
SYNE2-226ENST00000557084 A4D1N5 150 aa6.78□□□□□ -1.32
SYNE2-226ENST00000557084 SLC25A20O43772 301 aa6.78□□□□□ -1.32
SYNE2-226ENST00000557084 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
SYNE2-226ENST00000557084 VAMP3Q15836 100 aa6.78□□□□□ -1.32
SYNE2-226ENST00000557084 PYY3Q5JQD4 70 aa6.78□□□□□ -1.32
SYNE2-226ENST00000557084 TEX49A0A1B0GTD5 131 aa6.77□□□□□ -1.33
SYNE2-226ENST00000557084 SPRR1BP22528 89 aa6.77□□□□□ -1.33
SYNE2-226ENST00000557084 NHP2Q9NX24 153 aaKnown RBP6.77□□□□□ -1.33
SYNE2-226ENST00000557084 Q1RN00 199 aa6.76□□□□□ -1.33
SYNE2-226ENST00000557084 SMIM11BQ8TCY0 68 aa6.76□□□□□ -1.33
SYNE2-226ENST00000557084 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
SYNE2-226ENST00000557084 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
SYNE2-226ENST00000557084 HRCT1Q6UXD1 115 aa6.75□□□□□ -1.33
SYNE2-226ENST00000557084 Q8N377 158 aa6.75□□□□□ -1.33
SYNE2-226ENST00000557084 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms