RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 FAM218AQ96MZ4 157 aa7.83□□□□□ -1.16
NEK9-210ENST00000557026 LITAFQ99732 161 aa7.83□□□□□ -1.16
NEK9-210ENST00000557026 GIG44P09565 113 aaPredicted RBP7.83□□□□□ -1.16
NEK9-210ENST00000557026 KRTAP10-3P60369 221 aa7.83□□□□□ -1.16
NEK9-210ENST00000557026 IGFL1Q6UW32 110 aa7.82□□□□□ -1.16
NEK9-210ENST00000557026 PSPHP1O15172 72 aa7.8□□□□□ -1.16
NEK9-210ENST00000557026 ANKRD17O75179 2603 aaKnown RBP7.79□□□□□ -1.16
NEK9-210ENST00000557026 UQCR11O14957 56 aa7.79□□□□□ -1.16
NEK9-210ENST00000557026 Q9UF83 564 aa7.78□□□□□ -1.16
NEK9-210ENST00000557026 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
NEK9-210ENST00000557026 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
NEK9-210ENST00000557026 PKD1L2Q7Z442 2459 aa7.77□□□□□ -1.17
NEK9-210ENST00000557026 PRO0461Q9UI25 63 aa7.77□□□□□ -1.17
NEK9-210ENST00000557026 A8MUN3 132 aa7.74□□□□□ -1.17
NEK9-210ENST00000557026 SPTBN4Q9H254 2564 aa7.74□□□□□ -1.17
NEK9-210ENST00000557026 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
NEK9-210ENST00000557026 Q8N377 158 aa7.73□□□□□ -1.17
NEK9-210ENST00000557026 DSCR10P59022 87 aa7.73□□□□□ -1.17
NEK9-210ENST00000557026 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
NEK9-210ENST00000557026 K7EQZ3 153 aa7.72□□□□□ -1.17
NEK9-210ENST00000557026 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
NEK9-210ENST00000557026 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
NEK9-210ENST00000557026 Q6ZSA8 131 aa7.71□□□□□ -1.17
NEK9-210ENST00000557026 PRO0628Q9UI54 55 aa7.71□□□□□ -1.17
NEK9-210ENST00000557026 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
NEK9-210ENST00000557026 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
NEK9-210ENST00000557026 COA5Q86WW8 74 aa7.68□□□□□ -1.18
NEK9-210ENST00000557026 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
NEK9-210ENST00000557026 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
NEK9-210ENST00000557026 IGLV5-48A0A075B6I7 105 aa7.67□□□□□ -1.18
NEK9-210ENST00000557026 A0A1W2PNN7 141 aa7.67□□□□□ -1.18
NEK9-210ENST00000557026 FAM104AQ969W3 186 aa7.66□□□□□ -1.18
NEK9-210ENST00000557026 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
NEK9-210ENST00000557026 KLKP1Q107X0 134 aa7.64□□□□□ -1.19
NEK9-210ENST00000557026 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
NEK9-210ENST00000557026 TNP2Q05952 138 aa7.63□□□□□ -1.19
NEK9-210ENST00000557026 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
NEK9-210ENST00000557026 LCE6AA0A183 80 aa7.61□□□□□ -1.19
NEK9-210ENST00000557026 SETD2Q9BYW2 2564 aaPredicted RBP7.61□□□□□ -1.19
NEK9-210ENST00000557026 HRES1P13985 223 aa7.6□□□□□ -1.19
NEK9-210ENST00000557026 EPG5Q9HCE0 2579 aa7.6□□□□□ -1.19
NEK9-210ENST00000557026 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
NEK9-210ENST00000557026 EP400Q96L91 3159 aa7.59□□□□□ -1.19
NEK9-210ENST00000557026 ACANP16112 2415 aa7.58□□□□□ -1.2
NEK9-210ENST00000557026 OXTP01178 125 aa7.57□□□□□ -1.2
NEK9-210ENST00000557026 SRCAPQ6ZRS2 3230 aa7.56□□□□□ -1.2
NEK9-210ENST00000557026 POLQO75417 2590 aa7.56□□□□□ -1.2
NEK9-210ENST00000557026 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
NEK9-210ENST00000557026 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
NEK9-210ENST00000557026 FP248Q71RG6 208 aaPredicted RBP7.55□□□□□ -1.2
NEK9-210ENST00000557026 SPRR1BP22528 89 aa7.54□□□□□ -1.2
NEK9-210ENST00000557026 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
NEK9-210ENST00000557026 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.2
NEK9-210ENST00000557026 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
NEK9-210ENST00000557026 M0R2T5 61 aa7.48□□□□□ -1.21
NEK9-210ENST00000557026 SPRR1AP35321 89 aa7.48□□□□□ -1.21
NEK9-210ENST00000557026 IGLV8-61A0A075B6I0 122 aa7.48□□□□□ -1.21
NEK9-210ENST00000557026 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
NEK9-210ENST00000557026 ZCCHC13Q8WW36 166 aaKnown RBP7.48□□□□□ -1.21
NEK9-210ENST00000557026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.46□□□□□ -1.22
NEK9-210ENST00000557026 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
NEK9-210ENST00000557026 ANAPC11Q9NYG5 84 aa7.45□□□□□ -1.22
NEK9-210ENST00000557026 FLNBO75369 2602 aaKnown RBP7.44□□□□□ -1.22
NEK9-210ENST00000557026 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
NEK9-210ENST00000557026 Q5VSD8 79 aa7.41□□□□□ -1.22
NEK9-210ENST00000557026 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.23
NEK9-210ENST00000557026 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
NEK9-210ENST00000557026 S4R3F8 94 aa7.37□□□□□ -1.23
NEK9-210ENST00000557026 H7BZZ5 65 aa7.36□□□□□ -1.23
NEK9-210ENST00000557026 Q8N1X5 172 aa7.36□□□□□ -1.23
NEK9-210ENST00000557026 HECTD1Q9ULT8 2610 aa7.36□□□□□ -1.23
NEK9-210ENST00000557026 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
NEK9-210ENST00000557026 LINC01554Q52M75 96 aa7.35□□□□□ -1.23
NEK9-210ENST00000557026 RPS29P62273 56 aaKnown RBP7.35□□□□□ -1.23
NEK9-210ENST00000557026 A0A1B0GU33 70 aa7.34□□□□□ -1.23
NEK9-210ENST00000557026 MGAM2Q2M2H8 2515 aa7.33□□□□□ -1.24
NEK9-210ENST00000557026 OCR1Q9BZK8 76 aa7.33□□□□□ -1.24
NEK9-210ENST00000557026 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
NEK9-210ENST00000557026 Q1T7F1 81 aa7.31□□□□□ -1.24
NEK9-210ENST00000557026 MMP24-AS1A0A0U1RRL7 71 aa7.3□□□□□ -1.24
NEK9-210ENST00000557026 Q6ZR54 194 aa7.3□□□□□ -1.24
NEK9-210ENST00000557026 HELZ2Q9BYK8 2649 aaKnown RBP7.3□□□□□ -1.24
NEK9-210ENST00000557026 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
NEK9-210ENST00000557026 LCA10Q71F78 164 aa7.28□□□□□ -1.24
NEK9-210ENST00000557026 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
NEK9-210ENST00000557026 UTRNP46939 3433 aa7.26□□□□□ -1.25
NEK9-210ENST00000557026 A0A0D9SG42 100 aa7.25□□□□□ -1.25
NEK9-210ENST00000557026 SPINK7P58062 85 aa7.25□□□□□ -1.25
NEK9-210ENST00000557026 KRTAP10-1P60331 282 aa7.23□□□□□ -1.25
NEK9-210ENST00000557026 KTN1-AS1Q86SY8 53 aa7.23□□□□□ -1.25
NEK9-210ENST00000557026 R4GN34 69 aa7.23□□□□□ -1.25
NEK9-210ENST00000557026 CR1P17927 2039 aa7.23□□□□□ -1.25
NEK9-210ENST00000557026 KRTAP26-1Q6PEX3 210 aa7.22□□□□□ -1.25
NEK9-210ENST00000557026 GOLGB1Q14789 3259 aaKnown RBP7.22□□□□□ -1.25
NEK9-210ENST00000557026 LINC01558Q9Y6Z2 57 aa7.22□□□□□ -1.25
NEK9-210ENST00000557026 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.25
NEK9-210ENST00000557026 Q5W150 140 aa7.2□□□□□ -1.26
NEK9-210ENST00000557026 Q75L30 129 aa7.19□□□□□ -1.26
NEK9-210ENST00000557026 FLNAP21333 2647 aaKnown RBP7.18□□□□□ -1.26
NEK9-210ENST00000557026 USP24Q9UPU5 2620 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms