RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FAM229BQ4G0N7 80 aa6.34□□□□□ -1.39
LINC00239-201ENST00000556973 LINC00518Q8N0U6 118 aa6.34□□□□□ -1.39
LINC00239-201ENST00000556973 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
LINC00239-201ENST00000556973 TRAV23DV6A0A075B6W5 121 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 A0A087X002 238 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 B5MCH6 92 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 OR13C6PQ8NH95 151 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 SMCR5Q8TEV8 140 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 ANAPC11Q9NYG5 84 aa6.33□□□□□ -1.4
LINC00239-201ENST00000556973 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
LINC00239-201ENST00000556973 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
LINC00239-201ENST00000556973 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
LINC00239-201ENST00000556973 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
LINC00239-201ENST00000556973 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
LINC00239-201ENST00000556973 Q6ZRX8 168 aa6.31□□□□□ -1.4
LINC00239-201ENST00000556973 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
LINC00239-201ENST00000556973 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
LINC00239-201ENST00000556973 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
LINC00239-201ENST00000556973 COX8AP10176 69 aa6.28□□□□□ -1.4
LINC00239-201ENST00000556973 Q9BRP9 147 aa6.28□□□□□ -1.4
LINC00239-201ENST00000556973 A6NDN8 102 aa6.27□□□□□ -1.41
LINC00239-201ENST00000556973 DLEU1O43261 78 aa6.26□□□□□ -1.41
LINC00239-201ENST00000556973 ERC2-IT1O76042 136 aa6.26□□□□□ -1.41
LINC00239-201ENST00000556973 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
LINC00239-201ENST00000556973 TRAV13-2A0A0B4J235 113 aa6.25□□□□□ -1.41
LINC00239-201ENST00000556973 C6orf99Q4VX62 202 aa6.25□□□□□ -1.41
LINC00239-201ENST00000556973 TRBV7-6A0A0J9YX20 115 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 TSPAN13O95857 204 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 CTAG1AP78358 180 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 SPATA45Q537H7 98 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 GAGE2AQ6NT46 116 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 VAMP8Q9BV40 100 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 PAM16Q9Y3D7 125 aa6.24□□□□□ -1.41
LINC00239-201ENST00000556973 COX7BP24311 80 aa6.23□□□□□ -1.41
LINC00239-201ENST00000556973 ELOF1P60002 83 aaKnown RBP6.23□□□□□ -1.41
LINC00239-201ENST00000556973 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
LINC00239-201ENST00000556973 C14orf144Q96I85 54 aa6.23□□□□□ -1.41
LINC00239-201ENST00000556973 HIST1H4GQ99525 98 aa6.23□□□□□ -1.41
LINC00239-201ENST00000556973 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
LINC00239-201ENST00000556973 A0A1B0GWB2 263 aa6.22□□□□□ -1.41
LINC00239-201ENST00000556973 A4D1N5 150 aa6.22□□□□□ -1.41
LINC00239-201ENST00000556973 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
LINC00239-201ENST00000556973 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
LINC00239-201ENST00000556973 SLC25A34Q6PIV7 304 aa6.21□□□□□ -1.42
LINC00239-201ENST00000556973 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
LINC00239-201ENST00000556973 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
LINC00239-201ENST00000556973 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
LINC00239-201ENST00000556973 ST20-AS1Q8NBB2 130 aa6.2□□□□□ -1.42
LINC00239-201ENST00000556973 SMIM11BQ8TCY0 68 aa6.2□□□□□ -1.42
LINC00239-201ENST00000556973 VAMP3Q15836 100 aa6.19□□□□□ -1.42
LINC00239-201ENST00000556973 PYY3Q5JQD4 70 aa6.19□□□□□ -1.42
LINC00239-201ENST00000556973 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
LINC00239-201ENST00000556973 SPRR1BP22528 89 aa6.18□□□□□ -1.42
LINC00239-201ENST00000556973 PRR4Q16378 134 aa6.18□□□□□ -1.42
LINC00239-201ENST00000556973 Q8NBF4 154 aa6.18□□□□□ -1.42
LINC00239-201ENST00000556973 TAL2Q16559 108 aa6.17□□□□□ -1.42
LINC00239-201ENST00000556973 NHP2Q9NX24 153 aaKnown RBP6.17□□□□□ -1.42
LINC00239-201ENST00000556973 SPINK1P00995 79 aa6.16□□□□□ -1.42
LINC00239-201ENST00000556973 MOBPQ13875 183 aa6.16□□□□□ -1.42
LINC00239-201ENST00000556973 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
LINC00239-201ENST00000556973 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 SLC25A20O43772 301 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 CFC1BP0CG36 223 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 CFC1P0CG37 223 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 DEFB105AQ8NG35 78 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 C12orf57Q99622 126 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
LINC00239-201ENST00000556973 C9orf153Q5TBE3 101 aa6.14□□□□□ -1.43
LINC00239-201ENST00000556973 CEND1Q8N111 149 aa6.14□□□□□ -1.43
LINC00239-201ENST00000556973 RAB37Q96AX2 223 aa6.13□□□□□ -1.43
LINC00239-201ENST00000556973 IGLV5-48A0A075B6I7 105 aa6.12□□□□□ -1.43
LINC00239-201ENST00000556973 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
LINC00239-201ENST00000556973 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
LINC00239-201ENST00000556973 A6NJY4 79 aa6.12□□□□□ -1.43
LINC00239-201ENST00000556973 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
LINC00239-201ENST00000556973 BVES-AS1Q5T3Y7 98 aa6.12□□□□□ -1.43
LINC00239-201ENST00000556973 LINC00575Q6W349 94 aa6.12□□□□□ -1.43
LINC00239-201ENST00000556973 hADV29S1A0JD25 119 aa6.11□□□□□ -1.43
LINC00239-201ENST00000556973 LINC01547P58512 204 aaPredicted RBP6.11□□□□□ -1.43
LINC00239-201ENST00000556973 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
LINC00239-201ENST00000556973 Q1RN00 199 aa6.1□□□□□ -1.43
LINC00239-201ENST00000556973 SMIM29Q86T20 159 aa6.1□□□□□ -1.43
LINC00239-201ENST00000556973 Q8N377 158 aa6.1□□□□□ -1.43
LINC00239-201ENST00000556973 H7C2G1 150 aa6.09□□□□□ -1.43
LINC00239-201ENST00000556973 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
LINC00239-201ENST00000556973 UQCR10Q9UDW1 63 aa6.09□□□□□ -1.43
LINC00239-201ENST00000556973 PRO1854Q9UHT4 67 aa6.09□□□□□ -1.43
LINC00239-201ENST00000556973 LPAP08519 4548 aa6.09□□□□□ -1.43
LINC00239-201ENST00000556973 IGLV7-46A0A075B6I9 117 aa6.08□□□□□ -1.44
LINC00239-201ENST00000556973 H0YGX0 51 aa6.08□□□□□ -1.44
LINC00239-201ENST00000556973 SNCGO76070 127 aa6.08□□□□□ -1.44
LINC00239-201ENST00000556973 HSD52Q0P140 79 aa6.08□□□□□ -1.44
LINC00239-201ENST00000556973 FXYD2P54710 66 aa6.07□□□□□ -1.44
LINC00239-201ENST00000556973 Q6ZQY7 126 aa6.07□□□□□ -1.44
LINC00239-201ENST00000556973 FP248Q71RG6 208 aaPredicted RBP6.07□□□□□ -1.44
LINC00239-201ENST00000556973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.06□□□□□ -1.44
LINC00239-201ENST00000556973 CD164Q04900 197 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms