RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 FAM19A1Q7Z5A9 133 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 Q8N8P6 123 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 COX7B2Q8TF08 81 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 SCGB3A1Q96QR1 104 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 AMELXQ99217 191 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 GNB1LQ9BYB4 327 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 CDKN2A-AS1Q9UH64 79 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
HIF1A-209ENST00000556827 A0A1B0GXF2 115 aa2.66□□□□□ -1.98
HIF1A-209ENST00000556827 MT-ND4LP03901 98 aa2.66□□□□□ -1.98
HIF1A-209ENST00000556827 FP248Q71RG6 208 aaPredicted RBP2.66□□□□□ -1.98
HIF1A-209ENST00000556827 FAM19A3Q7Z5A8 133 aa2.66□□□□□ -1.98
HIF1A-209ENST00000556827 CBLN2Q8IUK8 224 aa2.66□□□□□ -1.98
HIF1A-209ENST00000556827 TIMM17AQ99595 171 aa2.66□□□□□ -1.98
HIF1A-209ENST00000556827 ZNF706Q9Y5V0 76 aaPredicted RBP2.66□□□□□ -1.98
HIF1A-209ENST00000556827 TINCRA0A1B0GVN0 87 aa2.65□□□□□ -1.99
HIF1A-209ENST00000556827 IGIPA6NJ69 53 aa2.65□□□□□ -1.99
HIF1A-209ENST00000556827 PFN2P35080 140 aa2.65□□□□□ -1.99
HIF1A-209ENST00000556827 S100A12P80511 92 aa2.65□□□□□ -1.99
HIF1A-209ENST00000556827 KRTAP13-2Q52LG2 175 aa2.65□□□□□ -1.99
HIF1A-209ENST00000556827 SLC25A34Q6PIV7 304 aa2.65□□□□□ -1.99
HIF1A-209ENST00000556827 PRLHP81277 87 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 SFTA2Q6UW10 78 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 TOMM6Q96B49 74 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 HIGD2AQ9BW72 106 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 TMEM126AQ9H061 195 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 CST9LQ9H4G1 147 aa2.64□□□□□ -1.99
HIF1A-209ENST00000556827 C9JQL5 133 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 SPINK1P00995 79 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 SPINK8P0C7L1 97 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 NDUFA6P56556 154 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 RAB14P61106 215 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 COX17Q14061 63 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 PMVKQ15126 192 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 COX19Q49B96 90 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 FAM19A2Q8N3H0 131 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 DAND5Q8N907 189 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 PLEKHB2Q96CS7 222 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 SMCO4Q9NRQ5 59 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
HIF1A-209ENST00000556827 TMEM223A0PJW6 202 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 LINC00158P58513 81 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 ASB16-AS1Q495Z4 193 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 FA2HQ7L5A8 372 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 ERG28Q9UKR5 140 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
HIF1A-209ENST00000556827 M0R378 163 aa2.61□□□□□ -1.99
HIF1A-209ENST00000556827 SCO1O75880 301 aa2.61□□□□□ -1.99
HIF1A-209ENST00000556827 S100PP25815 95 aa2.61□□□□□ -1.99
HIF1A-209ENST00000556827 C3orf22Q8N5N4 141 aa2.61□□□□□ -1.99
HIF1A-209ENST00000556827 ZNF625Q96I27 306 aaPredicted RBP2.61□□□□□ -1.99
HIF1A-209ENST00000556827 SPRR4Q96PI1 79 aa2.61□□□□□ -1.99
HIF1A-209ENST00000556827 TNXBP22105 4242 aa2.61□□□□□ -1.99
HIF1A-209ENST00000556827 ETDCA0A1B0GVM5 59 aa2.6□□□□□ -1.99
HIF1A-209ENST00000556827 SLC25A20O43772 301 aa2.6□□□□□ -1.99
HIF1A-209ENST00000556827 ADCYAP1P18509 176 aa2.6□□□□□ -1.99
HIF1A-209ENST00000556827 TMEM170BQ5T4T1 132 aa2.6□□□□□ -1.99
HIF1A-209ENST00000556827 TRAV9-1A0A075B6T8 112 aa2.59□□□□□ -1.99
HIF1A-209ENST00000556827 LINC00587B1AMM8 73 aa2.59□□□□□ -1.99
HIF1A-209ENST00000556827 IGLC3P0DOY3 106 aa2.59□□□□□ -1.99
HIF1A-209ENST00000556827 SSBP3-AS1Q7Z2R9 100 aa2.59□□□□□ -1.99
HIF1A-209ENST00000556827 CRCT1Q9UGL9 99 aa2.59□□□□□ -1.99
HIF1A-209ENST00000556827 MUC2Q02817 5179 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 LPAP08519 4548 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 RPS29P62273 56 aaKnown RBP2.58□□□□□ -2
HIF1A-209ENST00000556827 FABP9Q0Z7S8 132 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 BAGE3Q86Y29 109 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 BOD1L2Q8IYS8 172 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 SMCR5Q8TEV8 140 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 MAP1LC3CQ9BXW4 147 aa2.58□□□□□ -2
HIF1A-209ENST00000556827 LINC01546A6NGU7 62 aa2.57□□□□□ -2
HIF1A-209ENST00000556827 ZNF22P17026 224 aaPredicted RBP2.57□□□□□ -2
HIF1A-209ENST00000556827 JOSD1Q15040 202 aaPredicted RBP2.57□□□□□ -2
HIF1A-209ENST00000556827 MEIG1Q5JSS6 88 aa2.57□□□□□ -2
HIF1A-209ENST00000556827 SEC11CQ9BY50 192 aa2.57□□□□□ -2
HIF1A-209ENST00000556827 KCNQ1DNQ9H478 68 aa2.57□□□□□ -2
HIF1A-209ENST00000556827 NCR3O14931 201 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 HBDP02042 147 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 LINC00614P0C842 121 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
HIF1A-209ENST00000556827 S100A7L2Q5SY68 101 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 C9orf153Q5TBE3 101 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 MIEN1Q9BRT3 115 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 LIMD2Q9BT23 127 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 CBY1Q9Y3M2 126 aa2.56□□□□□ -2
HIF1A-209ENST00000556827 TRBV10-3A0A0K0K1G6 114 aa2.55□□□□□ -2
HIF1A-209ENST00000556827 M0R2T5 61 aa2.55□□□□□ -2
HIF1A-209ENST00000556827 SMIM13P0DJ93 91 aa2.55□□□□□ -2
HIF1A-209ENST00000556827 DDTP30046 118 aa2.55□□□□□ -2
HIF1A-209ENST00000556827 COMMD7Q86VX2 200 aa2.55□□□□□ -2
HIF1A-209ENST00000556827 CHTOPQ9Y3Y2 248 aaKnown RBP2.55□□□□□ -2
HIF1A-209ENST00000556827 MYMXA0A1B0GTQ4 84 aa2.54□□□□□ -2
HIF1A-209ENST00000556827 C11orf86A6NJI1 115 aa2.54□□□□□ -2
HIF1A-209ENST00000556827 SPRR1AP35321 89 aa2.54□□□□□ -2
HIF1A-209ENST00000556827 IFITM2Q01629 132 aa2.54□□□□□ -2
HIF1A-209ENST00000556827 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms