RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 H3BS24 57 aa6.26□□□□□ -1.41
XRCC3-216ENST00000556682 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
XRCC3-216ENST00000556682 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
XRCC3-216ENST00000556682 HINT1P49773 126 aaPredicted RBP6.25□□□□□ -1.41
XRCC3-216ENST00000556682 LPAP08519 4548 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 IGLV6-57P01721 117 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 NPC2P61916 151 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 ADAMTSL4-AS1Q5T5F5 129 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 GAGE2AQ6NT46 116 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 Q6ZRX8 168 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
XRCC3-216ENST00000556682 TRAV23DV6A0A075B6W5 121 aa6.23□□□□□ -1.41
XRCC3-216ENST00000556682 TIMM17BO60830 172 aa6.23□□□□□ -1.41
XRCC3-216ENST00000556682 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
XRCC3-216ENST00000556682 RNF213Q63HN8 5207 aa6.23□□□□□ -1.41
XRCC3-216ENST00000556682 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 C20orf202A1L168 122 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 ZNF815PA8K554 130 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 ZNF73O43830 326 aaPredicted RBP6.22□□□□□ -1.41
XRCC3-216ENST00000556682 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
XRCC3-216ENST00000556682 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 Q8NBF4 154 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
XRCC3-216ENST00000556682 SPINK1P00995 79 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 AKR1D1P51857 326 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 KRTDAPP60985 99 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 XP32Q5T750 250 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 OR13C6PQ8NH95 151 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 LINC00308Q8TCZ7 52 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
XRCC3-216ENST00000556682 ERC2-IT1O76042 136 aa6.2□□□□□ -1.42
XRCC3-216ENST00000556682 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
XRCC3-216ENST00000556682 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
XRCC3-216ENST00000556682 LINC00518Q8N0U6 118 aa6.2□□□□□ -1.42
XRCC3-216ENST00000556682 Q9BRP9 147 aa6.2□□□□□ -1.42
XRCC3-216ENST00000556682 IGLV9-49A0A0B4J1Y8 123 aa6.19□□□□□ -1.42
XRCC3-216ENST00000556682 C5orf52A6NGY3 159 aa6.19□□□□□ -1.42
XRCC3-216ENST00000556682 SCGB1D4Q6XE38 83 aa6.19□□□□□ -1.42
XRCC3-216ENST00000556682 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
XRCC3-216ENST00000556682 COPS9Q8WXC6 57 aa6.19□□□□□ -1.42
XRCC3-216ENST00000556682 LITAFQ99732 161 aa6.19□□□□□ -1.42
XRCC3-216ENST00000556682 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
XRCC3-216ENST00000556682 MOBPQ13875 183 aa6.18□□□□□ -1.42
XRCC3-216ENST00000556682 SPANXDQ9BXN6 97 aa6.18□□□□□ -1.42
XRCC3-216ENST00000556682 DHRS4-AS1Q9P1J3 65 aa6.17□□□□□ -1.42
XRCC3-216ENST00000556682 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
XRCC3-216ENST00000556682 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
XRCC3-216ENST00000556682 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
XRCC3-216ENST00000556682 IFITM1P13164 125 aa6.15□□□□□ -1.42
XRCC3-216ENST00000556682 C9orf153Q5TBE3 101 aa6.15□□□□□ -1.42
XRCC3-216ENST00000556682 Q6ZVH6 145 aa6.15□□□□□ -1.42
XRCC3-216ENST00000556682 SNRPEP62304 92 aaKnown RBP6.14□□□□□ -1.43
XRCC3-216ENST00000556682 COX7BP24311 80 aa6.13□□□□□ -1.43
XRCC3-216ENST00000556682 ST20-AS1Q8NBB2 130 aa6.13□□□□□ -1.43
XRCC3-216ENST00000556682 SLC25A20O43772 301 aa6.12□□□□□ -1.43
XRCC3-216ENST00000556682 S100A2P29034 98 aa6.12□□□□□ -1.43
XRCC3-216ENST00000556682 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
XRCC3-216ENST00000556682 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
XRCC3-216ENST00000556682 LAMTOR3Q9UHA4 124 aa6.12□□□□□ -1.43
XRCC3-216ENST00000556682 TRBV7-6A0A0J9YX20 115 aa6.11□□□□□ -1.43
XRCC3-216ENST00000556682 SPRR1BP22528 89 aa6.11□□□□□ -1.43
XRCC3-216ENST00000556682 ELOF1P60002 83 aaKnown RBP6.11□□□□□ -1.43
XRCC3-216ENST00000556682 A6NDN8 102 aa6.1□□□□□ -1.43
XRCC3-216ENST00000556682 HSBP1L1C9JCN9 74 aa6.1□□□□□ -1.43
XRCC3-216ENST00000556682 S100A1P23297 94 aa6.1□□□□□ -1.43
XRCC3-216ENST00000556682 TAL2Q16559 108 aa6.1□□□□□ -1.43
XRCC3-216ENST00000556682 PCP2Q8IVA1 136 aa6.1□□□□□ -1.43
XRCC3-216ENST00000556682 Q8N377 158 aa6.1□□□□□ -1.43
XRCC3-216ENST00000556682 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
XRCC3-216ENST00000556682 A0A1B0GWB2 263 aa6.09□□□□□ -1.43
XRCC3-216ENST00000556682 MUSTN1Q8IVN3 82 aa6.09□□□□□ -1.43
XRCC3-216ENST00000556682 A4D1N5 150 aa6.08□□□□□ -1.44
XRCC3-216ENST00000556682 S100A6P06703 90 aa6.08□□□□□ -1.44
XRCC3-216ENST00000556682 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
XRCC3-216ENST00000556682 TEX49A0A1B0GTD5 131 aa6.07□□□□□ -1.44
XRCC3-216ENST00000556682 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
XRCC3-216ENST00000556682 DEFB105AQ8NG35 78 aa6.07□□□□□ -1.44
XRCC3-216ENST00000556682 HIST1H2BLQ99880 126 aa6.07□□□□□ -1.44
XRCC3-216ENST00000556682 LIMD2Q9BT23 127 aa6.07□□□□□ -1.44
XRCC3-216ENST00000556682 NHP2Q9NX24 153 aaKnown RBP6.06□□□□□ -1.44
XRCC3-216ENST00000556682 MUC2Q02817 5179 aa6.04□□□□□ -1.44
XRCC3-216ENST00000556682 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
XRCC3-216ENST00000556682 CD164Q04900 197 aa6.04□□□□□ -1.44
XRCC3-216ENST00000556682 VAMP3Q15836 100 aa6.04□□□□□ -1.44
XRCC3-216ENST00000556682 Q1RN00 199 aa6.04□□□□□ -1.44
XRCC3-216ENST00000556682 PRO1933Q9H354 126 aa6.04□□□□□ -1.44
XRCC3-216ENST00000556682 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
XRCC3-216ENST00000556682 ASB16-AS1Q495Z4 193 aa6.02□□□□□ -1.45
XRCC3-216ENST00000556682 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
XRCC3-216ENST00000556682 IGLV5-48A0A075B6I7 105 aa6.01□□□□□ -1.45
XRCC3-216ENST00000556682 H7C2G1 150 aa6.01□□□□□ -1.45
XRCC3-216ENST00000556682 SCGB1D1O95968 90 aa6.01□□□□□ -1.45
XRCC3-216ENST00000556682 MUC17Q685J3 4493 aa5.99□□□□□ -1.45
XRCC3-216ENST00000556682 F8WEM9 126 aa5.98□□□□□ -1.45
XRCC3-216ENST00000556682 LINC01547P58512 204 aaPredicted RBP5.98□□□□□ -1.45
XRCC3-216ENST00000556682 SMIM29Q86T20 159 aa5.98□□□□□ -1.45
XRCC3-216ENST00000556682 HIST1H4GQ99525 98 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms