RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ZNF73O43830 326 aaPredicted RBP6□□□□□ -1.45
SPTLC2-205ENST00000556607 IGLV6-57P01721 117 aa6□□□□□ -1.45
SPTLC2-205ENST00000556607 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
SPTLC2-205ENST00000556607 SOSTDC1Q6X4U4 206 aa6□□□□□ -1.45
SPTLC2-205ENST00000556607 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
SPTLC2-205ENST00000556607 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
SPTLC2-205ENST00000556607 CBY1Q9Y3M2 126 aa5.99□□□□□ -1.45
SPTLC2-205ENST00000556607 EIF4EBP3O60516 100 aaPredicted RBP5.98□□□□□ -1.45
SPTLC2-205ENST00000556607 A6NJY4 79 aa5.97□□□□□ -1.45
SPTLC2-205ENST00000556607 ST20-AS1Q8NBB2 130 aa5.97□□□□□ -1.45
SPTLC2-205ENST00000556607 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
SPTLC2-205ENST00000556607 ZNF815PA8K554 130 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BKO60814 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BJP06899 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BOP23527 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BBP33778 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BDP58876 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BCP62807 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST2H2BEQ16778 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BHQ93079 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BNQ99877 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 HIST1H2BMQ99879 126 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 SPANXCQ9NY87 97 aa5.96□□□□□ -1.46
SPTLC2-205ENST00000556607 SLC25A20O43772 301 aa5.95□□□□□ -1.46
SPTLC2-205ENST00000556607 PET117Q6UWS5 81 aa5.95□□□□□ -1.46
SPTLC2-205ENST00000556607 Q8N377 158 aa5.95□□□□□ -1.46
SPTLC2-205ENST00000556607 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
SPTLC2-205ENST00000556607 LINC01545Q5VT33 79 aa5.94□□□□□ -1.46
SPTLC2-205ENST00000556607 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
SPTLC2-205ENST00000556607 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
SPTLC2-205ENST00000556607 TIMM17BO60830 172 aa5.93□□□□□ -1.46
SPTLC2-205ENST00000556607 KRTDAPP60985 99 aa5.93□□□□□ -1.46
SPTLC2-205ENST00000556607 SLC25A34Q6PIV7 304 aa5.93□□□□□ -1.46
SPTLC2-205ENST00000556607 LITAFQ99732 161 aa5.93□□□□□ -1.46
SPTLC2-205ENST00000556607 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
SPTLC2-205ENST00000556607 C3orf79P0CE67 100 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 COX7BP24311 80 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 TAL2Q16559 108 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 LINC00518Q8N0U6 118 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 DEFB105AQ8NG35 78 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 SPANXDQ9BXN6 97 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 LAMTOR3Q9UHA4 124 aa5.92□□□□□ -1.46
SPTLC2-205ENST00000556607 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
SPTLC2-205ENST00000556607 C5orf52A6NGY3 159 aa5.91□□□□□ -1.46
SPTLC2-205ENST00000556607 C6orf99Q4VX62 202 aa5.91□□□□□ -1.46
SPTLC2-205ENST00000556607 LCE2AQ5TA79 106 aaPredicted RBP5.91□□□□□ -1.46
SPTLC2-205ENST00000556607 C20orf202A1L168 122 aa5.9□□□□□ -1.46
SPTLC2-205ENST00000556607 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
SPTLC2-205ENST00000556607 Q1RN00 199 aa5.89□□□□□ -1.47
SPTLC2-205ENST00000556607 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
SPTLC2-205ENST00000556607 LIMD2Q9BT23 127 aa5.89□□□□□ -1.47
SPTLC2-205ENST00000556607 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
SPTLC2-205ENST00000556607 A6NDN8 102 aa5.88□□□□□ -1.47
SPTLC2-205ENST00000556607 ELOF1P60002 83 aaKnown RBP5.88□□□□□ -1.47
SPTLC2-205ENST00000556607 ATOH7Q8N100 152 aa5.88□□□□□ -1.47
SPTLC2-205ENST00000556607 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
SPTLC2-205ENST00000556607 SPRR1BP22528 89 aa5.87□□□□□ -1.47
SPTLC2-205ENST00000556607 LINC01547P58512 204 aaPredicted RBP5.87□□□□□ -1.47
SPTLC2-205ENST00000556607 TEX49A0A1B0GTD5 131 aa5.85□□□□□ -1.47
SPTLC2-205ENST00000556607 IFITM1P13164 125 aa5.85□□□□□ -1.47
SPTLC2-205ENST00000556607 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
SPTLC2-205ENST00000556607 XP32Q5T750 250 aa5.85□□□□□ -1.47
SPTLC2-205ENST00000556607 MUSTN1Q8IVN3 82 aa5.85□□□□□ -1.47
SPTLC2-205ENST00000556607 PRO1933Q9H354 126 aa5.85□□□□□ -1.47
SPTLC2-205ENST00000556607 A0A1B0GWB2 263 aa5.84□□□□□ -1.47
SPTLC2-205ENST00000556607 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
SPTLC2-205ENST00000556607 H7C2G1 150 aa5.84□□□□□ -1.47
SPTLC2-205ENST00000556607 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
SPTLC2-205ENST00000556607 TRBV7-6A0A0J9YX20 115 aa5.83□□□□□ -1.48
SPTLC2-205ENST00000556607 AKR1D1P51857 326 aa5.83□□□□□ -1.48
SPTLC2-205ENST00000556607 COA6Q5JTJ3 125 aaKnown RBP5.83□□□□□ -1.48
SPTLC2-205ENST00000556607 Q6ZVH6 145 aa5.83□□□□□ -1.48
SPTLC2-205ENST00000556607 PCP2Q8IVA1 136 aa5.83□□□□□ -1.48
SPTLC2-205ENST00000556607 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
SPTLC2-205ENST00000556607 NHP2Q9NX24 153 aaKnown RBP5.81□□□□□ -1.48
SPTLC2-205ENST00000556607 A4D1N5 150 aa5.8□□□□□ -1.48
SPTLC2-205ENST00000556607 CD164Q04900 197 aa5.8□□□□□ -1.48
SPTLC2-205ENST00000556607 A0A0G2JQZ4 141 aa5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 HSBP1L1C9JCN9 74 aa5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 S100A2P29034 98 aa5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 SNRPEP62304 92 aaKnown RBP5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 VAMP3Q15836 100 aa5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 SMIM11BQ8TCY0 68 aa5.79□□□□□ -1.48
SPTLC2-205ENST00000556607 SMIM29Q86T20 159 aa5.78□□□□□ -1.48
SPTLC2-205ENST00000556607 IGLV8-61A0A075B6I0 122 aa5.77□□□□□ -1.49
SPTLC2-205ENST00000556607 IGLV5-48A0A075B6I7 105 aa5.77□□□□□ -1.49
SPTLC2-205ENST00000556607 F8WEM9 126 aa5.77□□□□□ -1.49
SPTLC2-205ENST00000556607 hADV29S1A0JD25 119 aa5.74□□□□□ -1.49
SPTLC2-205ENST00000556607 TCL1BO95988 128 aa5.74□□□□□ -1.49
SPTLC2-205ENST00000556607 S100A6P06703 90 aa5.74□□□□□ -1.49
SPTLC2-205ENST00000556607 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
SPTLC2-205ENST00000556607 C1orf195Q5TG92 126 aa5.74□□□□□ -1.49
SPTLC2-205ENST00000556607 HIST3H2BBQ8N257 126 aa5.74□□□□□ -1.49
SPTLC2-205ENST00000556607 Q5XG85 94 aa5.73□□□□□ -1.49
SPTLC2-205ENST00000556607 Q6ZQY7 126 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms