RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 KRTAP4-16G5E9R7 235 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-217ENST00000556533 MUSTN1Q8IVN3 82 aa10.15□□□□□ -0.78
PSEN1-217ENST00000556533 A0A087X002 238 aa10.14□□□□□ -0.79
PSEN1-217ENST00000556533 B5MCH6 92 aa10.14□□□□□ -0.79
PSEN1-217ENST00000556533 IFITM1P13164 125 aa10.14□□□□□ -0.79
PSEN1-217ENST00000556533 SMCR5Q8TEV8 140 aa10.14□□□□□ -0.79
PSEN1-217ENST00000556533 COPS9Q8WXC6 57 aa10.14□□□□□ -0.79
PSEN1-217ENST00000556533 LINC00518Q8N0U6 118 aa10.13□□□□□ -0.79
PSEN1-217ENST00000556533 LOC105371267A0A1B0GV96 52 aa10.12□□□□□ -0.79
PSEN1-217ENST00000556533 ZNF73O43830 326 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-217ENST00000556533 Q6ZVH6 145 aa10.12□□□□□ -0.79
PSEN1-217ENST00000556533 TYMSOSQ8TAI1 123 aa10.12□□□□□ -0.79
PSEN1-217ENST00000556533 CBY1Q9Y3M2 126 aa10.11□□□□□ -0.79
PSEN1-217ENST00000556533 HMCN2Q8NDA2 5059 aa10.11□□□□□ -0.79
PSEN1-217ENST00000556533 FAM229BQ4G0N7 80 aa10.1□□□□□ -0.79
PSEN1-217ENST00000556533 SPRR4Q96PI1 79 aa10.1□□□□□ -0.79
PSEN1-217ENST00000556533 HINT1P49773 126 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-217ENST00000556533 Q6ZRX8 168 aa10.09□□□□□ -0.79
PSEN1-217ENST00000556533 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
PSEN1-217ENST00000556533 ZNF706Q9Y5V0 76 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-217ENST00000556533 A6NDN8 102 aa10.08□□□□□ -0.8
PSEN1-217ENST00000556533 ERC2-IT1O76042 136 aa10.08□□□□□ -0.8
PSEN1-217ENST00000556533 KRTAP13-2Q52LG2 175 aa10.08□□□□□ -0.8
PSEN1-217ENST00000556533 Q9BRP9 147 aa10.08□□□□□ -0.8
PSEN1-217ENST00000556533 PAM16Q9Y3D7 125 aa10.08□□□□□ -0.8
PSEN1-217ENST00000556533 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-217ENST00000556533 COX8AP10176 69 aa10.06□□□□□ -0.8
PSEN1-217ENST00000556533 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
PSEN1-217ENST00000556533 C14orf144Q96I85 54 aa10.06□□□□□ -0.8
PSEN1-217ENST00000556533 VAMP8Q9BV40 100 aa10.06□□□□□ -0.8
PSEN1-217ENST00000556533 TSPAN13O95857 204 aa10.05□□□□□ -0.8
PSEN1-217ENST00000556533 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
PSEN1-217ENST00000556533 C6orf99Q4VX62 202 aa10.03□□□□□ -0.8
PSEN1-217ENST00000556533 C3orf22Q8N5N4 141 aa10.03□□□□□ -0.8
PSEN1-217ENST00000556533 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
PSEN1-217ENST00000556533 COX7BP24311 80 aa10.02□□□□□ -0.81
PSEN1-217ENST00000556533 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
PSEN1-217ENST00000556533 A4D1N5 150 aa10□□□□□ -0.81
PSEN1-217ENST00000556533 DLEU1O43261 78 aa10□□□□□ -0.81
PSEN1-217ENST00000556533 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
PSEN1-217ENST00000556533 SLC25A34Q6PIV7 304 aa9.98□□□□□ -0.81
PSEN1-217ENST00000556533 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
PSEN1-217ENST00000556533 C12orf57Q99622 126 aa9.98□□□□□ -0.81
PSEN1-217ENST00000556533 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
PSEN1-217ENST00000556533 LINC00483Q53H64 154 aa9.97□□□□□ -0.81
PSEN1-217ENST00000556533 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
PSEN1-217ENST00000556533 SMIM6P0DI80 62 aa9.96□□□□□ -0.82
PSEN1-217ENST00000556533 ELOF1P60002 83 aaKnown RBP9.96□□□□□ -0.82
PSEN1-217ENST00000556533 PYY3Q5JQD4 70 aa9.96□□□□□ -0.82
PSEN1-217ENST00000556533 SMIM11BQ8TCY0 68 aa9.96□□□□□ -0.82
PSEN1-217ENST00000556533 TRBV7-6A0A0J9YX20 115 aa9.94□□□□□ -0.82
PSEN1-217ENST00000556533 PRR4Q16378 134 aa9.94□□□□□ -0.82
PSEN1-217ENST00000556533 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
PSEN1-217ENST00000556533 Q8NBF4 154 aa9.93□□□□□ -0.82
PSEN1-217ENST00000556533 HIGD1BQ9P298 99 aa9.93□□□□□ -0.82
PSEN1-217ENST00000556533 MOBPQ13875 183 aa9.92□□□□□ -0.82
PSEN1-217ENST00000556533 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
PSEN1-217ENST00000556533 DEFB105AQ8NG35 78 aa9.92□□□□□ -0.82
PSEN1-217ENST00000556533 C2orf91Q6ZV80 131 aa9.91□□□□□ -0.82
PSEN1-217ENST00000556533 VAMP3Q15836 100 aa9.9□□□□□ -0.82
PSEN1-217ENST00000556533 TAL2Q16559 108 aa9.9□□□□□ -0.82
PSEN1-217ENST00000556533 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
PSEN1-217ENST00000556533 H7C2G1 150 aa9.88□□□□□ -0.83
PSEN1-217ENST00000556533 SPAG11AQ6PDA7 123 aa9.88□□□□□ -0.83
PSEN1-217ENST00000556533 RAB37Q96AX2 223 aa9.87□□□□□ -0.83
PSEN1-217ENST00000556533 RETNLBQ9BQ08 111 aa9.87□□□□□ -0.83
PSEN1-217ENST00000556533 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
PSEN1-217ENST00000556533 CFC1P0CG37 223 aa9.86□□□□□ -0.83
PSEN1-217ENST00000556533 SSBP3-AS1Q7Z2R9 100 aa9.86□□□□□ -0.83
PSEN1-217ENST00000556533 SLC25A20O43772 301 aa9.85□□□□□ -0.83
PSEN1-217ENST00000556533 CEND1Q8N111 149 aa9.85□□□□□ -0.83
PSEN1-217ENST00000556533 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
PSEN1-217ENST00000556533 LAMTOR3Q9UHA4 124 aa9.85□□□□□ -0.83
PSEN1-217ENST00000556533 SPRR1BP22528 89 aa9.84□□□□□ -0.83
PSEN1-217ENST00000556533 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
PSEN1-217ENST00000556533 TEX49A0A1B0GTD5 131 aa9.83□□□□□ -0.84
PSEN1-217ENST00000556533 Q1RN00 199 aa9.83□□□□□ -0.84
PSEN1-217ENST00000556533 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
PSEN1-217ENST00000556533 LRP2P98164 4655 aa9.8□□□□□ -0.84
PSEN1-217ENST00000556533 TMEM238LA0A1B0GVL6 79 aa9.8□□□□□ -0.84
PSEN1-217ENST00000556533 A6NJY4 79 aa9.8□□□□□ -0.84
PSEN1-217ENST00000556533 SPINK1P00995 79 aa9.8□□□□□ -0.84
PSEN1-217ENST00000556533 CTAG1AP78358 180 aa9.8□□□□□ -0.84
PSEN1-217ENST00000556533 UQCR10Q9UDW1 63 aa9.8□□□□□ -0.84
PSEN1-217ENST00000556533 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
PSEN1-217ENST00000556533 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
PSEN1-217ENST00000556533 FXYD2P54710 66 aa9.79□□□□□ -0.84
PSEN1-217ENST00000556533 BVES-AS1Q5T3Y7 98 aa9.79□□□□□ -0.84
PSEN1-217ENST00000556533 LINC01547P58512 204 aaPredicted RBP9.78□□□□□ -0.84
PSEN1-217ENST00000556533 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
PSEN1-217ENST00000556533 HSD52Q0P140 79 aa9.77□□□□□ -0.85
PSEN1-217ENST00000556533 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.85
PSEN1-217ENST00000556533 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
PSEN1-217ENST00000556533 Q8N377 158 aa9.76□□□□□ -0.85
PSEN1-217ENST00000556533 Q6ZQY7 126 aa9.75□□□□□ -0.85
PSEN1-217ENST00000556533 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
PSEN1-217ENST00000556533 LPAP08519 4548 aa9.75□□□□□ -0.85
PSEN1-217ENST00000556533 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
PSEN1-217ENST00000556533 PRO1933Q9H354 126 aa9.74□□□□□ -0.85
PSEN1-217ENST00000556533 K7ERJ3 54 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms