RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
GPHN-213ENST00000556501 LAMTOR3Q9UHA4 124 aa3.54□□□□□ -1.84
GPHN-213ENST00000556501 MGAM2Q2M2H8 2515 aa3.54□□□□□ -1.84
GPHN-213ENST00000556501 IGLV5-37A0A075B6J1 123 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 UQCRQO14949 82 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 Q6ZRP5 223 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 C3orf22Q8N5N4 141 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 SS18L2Q9UHA2 77 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 LINC00588Q9Y4M8 146 aa3.53□□□□□ -1.84
GPHN-213ENST00000556501 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 TRBV7-4A0A0J9YYF1 115 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 USP17L23D6RBM5 183 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 K7EIL1 84 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 COX7CP15954 63 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 C9orf153Q5TBE3 101 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 SERTAD4-AS1Q5TG53 156 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 NKAPP1Q8N9T2 125 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 MRAPQ8TCY5 172 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 C7orf33Q8WU49 177 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 RMI2Q96E14 147 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 DSCR8Q96T75 97 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 KCNQ1DNQ9H478 68 aa3.52□□□□□ -1.85
GPHN-213ENST00000556501 A0A087WVE0 104 aa3.51□□□□□ -1.85
GPHN-213ENST00000556501 PRYO14603 147 aa3.51□□□□□ -1.85
GPHN-213ENST00000556501 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
GPHN-213ENST00000556501 UPK3BQ9BT76 320 aa3.51□□□□□ -1.85
GPHN-213ENST00000556501 M0R2N4 97 aa3.5□□□□□ -1.85
GPHN-213ENST00000556501 PRB2P02812 416 aaPredicted RBP3.5□□□□□ -1.85
GPHN-213ENST00000556501 CRYGAP11844 174 aa3.5□□□□□ -1.85
GPHN-213ENST00000556501 CASC10Q5T4H9 136 aa3.5□□□□□ -1.85
GPHN-213ENST00000556501 Q6ZVQ6 151 aa3.5□□□□□ -1.85
GPHN-213ENST00000556501 SERP2Q8N6R1 65 aa3.5□□□□□ -1.85
GPHN-213ENST00000556501 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.5□□□□□ -1.85
GPHN-213ENST00000556501 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
GPHN-213ENST00000556501 CXCL6P80162 114 aa3.49□□□□□ -1.85
GPHN-213ENST00000556501 FAM19A1Q7Z5A9 133 aa3.49□□□□□ -1.85
GPHN-213ENST00000556501 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
GPHN-213ENST00000556501 TRRAPQ9Y4A5 3859 aa3.48□□□□□ -1.85
GPHN-213ENST00000556501 IGLV1-50A0A075B6I6 118 aa3.48□□□□□ -1.85
GPHN-213ENST00000556501 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
GPHN-213ENST00000556501 KRTAP4-16G5E9R7 235 aaPredicted RBP3.48□□□□□ -1.85
GPHN-213ENST00000556501 BCE1O60756 84 aa3.48□□□□□ -1.85
GPHN-213ENST00000556501 SPRR1AP35321 89 aa3.48□□□□□ -1.85
GPHN-213ENST00000556501 LINC01547P58512 204 aaPredicted RBP3.48□□□□□ -1.85
GPHN-213ENST00000556501 Q6ZRX8 168 aa3.48□□□□□ -1.85
GPHN-213ENST00000556501 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
GPHN-213ENST00000556501 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
GPHN-213ENST00000556501 IGLV5-48A0A075B6I7 105 aa3.46□□□□□ -1.86
GPHN-213ENST00000556501 ETDCA0A1B0GVM5 59 aa3.46□□□□□ -1.86
GPHN-213ENST00000556501 HAMPP81172 84 aa3.46□□□□□ -1.86
GPHN-213ENST00000556501 FAM19A5Q7Z5A7 132 aaPredicted RBP3.46□□□□□ -1.86
GPHN-213ENST00000556501 MRPL55Q7Z7F7 128 aaKnown RBP3.46□□□□□ -1.86
GPHN-213ENST00000556501 Q8N377 158 aa3.46□□□□□ -1.86
GPHN-213ENST00000556501 Q9BRP9 147 aa3.46□□□□□ -1.86
GPHN-213ENST00000556501 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
GPHN-213ENST00000556501 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
GPHN-213ENST00000556501 RPL37AP8A6NKH3 93 aa3.45□□□□□ -1.86
GPHN-213ENST00000556501 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
GPHN-213ENST00000556501 SMIM20Q8N5G0 67 aa3.45□□□□□ -1.86
GPHN-213ENST00000556501 KRTAP1-5Q9BYS1 174 aa3.45□□□□□ -1.86
GPHN-213ENST00000556501 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
GPHN-213ENST00000556501 ANK2Q01484 3957 aa3.44□□□□□ -1.86
GPHN-213ENST00000556501 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
GPHN-213ENST00000556501 A0A1B0GW54 56 aa3.44□□□□□ -1.86
GPHN-213ENST00000556501 TMEM258P61165 79 aa3.44□□□□□ -1.86
GPHN-213ENST00000556501 CYSTM1Q9H1C7 97 aa3.44□□□□□ -1.86
GPHN-213ENST00000556501 APLNQ9ULZ1 77 aa3.44□□□□□ -1.86
GPHN-213ENST00000556501 A0A096LNI7 61 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 C16orf90A8MZG2 172 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 REG3GQ6UW15 175 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 SCXQ7RTU7 201 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 UBE2DNLQ8IWF7 75 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 DEFB105AQ8NG35 78 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 B9D2Q9BPU9 175 aa3.43□□□□□ -1.86
GPHN-213ENST00000556501 A0A1W2PNM2 257 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 J3KT08 172 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 ERC2-IT1O76042 136 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 IGKV4-1P06312 121 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 FUSP35637 526 aaKnown RBP eCLIP3.42□□□□□ -1.86
GPHN-213ENST00000556501 UBE2BP63146 152 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 NREPQ16612 68 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 C1orf137Q5JT78 98 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 ST20-AS1Q8NBB2 130 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 Q8NBF4 154 aa3.42□□□□□ -1.86
GPHN-213ENST00000556501 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 MEGF8Q7Z7M0 2845 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 C3orf84H3BNL1 204 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 PSCAO43653 123 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 SPRR4Q96PI1 79 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 PKIGQ9Y2B9 76 aa3.41□□□□□ -1.86
GPHN-213ENST00000556501 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
GPHN-213ENST00000556501 IGKV2-24A0A0C4DH68 120 aa3.4□□□□□ -1.87
GPHN-213ENST00000556501 A0A1W2PNN7 141 aa3.4□□□□□ -1.87
GPHN-213ENST00000556501 F8WEM9 126 aa3.4□□□□□ -1.87
GPHN-213ENST00000556501 BPY2O14599 106 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms