RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TRAV23DV6A0A075B6W5 121 aa7.75□□□□□ -1.17
CHMP4BP1-201ENST00000556017 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
CHMP4BP1-201ENST00000556017 APOC3P02656 99 aa7.75□□□□□ -1.17
CHMP4BP1-201ENST00000556017 SPRR1BP22528 89 aa7.75□□□□□ -1.17
CHMP4BP1-201ENST00000556017 H0Y8G0 127 aa7.74□□□□□ -1.17
CHMP4BP1-201ENST00000556017 C9orf92A6NGG3 77 aa7.73□□□□□ -1.17
CHMP4BP1-201ENST00000556017 C5orf52A6NGY3 159 aa7.72□□□□□ -1.17
CHMP4BP1-201ENST00000556017 HSBP1O75506 76 aa7.72□□□□□ -1.17
CHMP4BP1-201ENST00000556017 JOSD1Q15040 202 aaPredicted RBP7.72□□□□□ -1.17
CHMP4BP1-201ENST00000556017 S100A7L2Q5SY68 101 aa7.72□□□□□ -1.17
CHMP4BP1-201ENST00000556017 PMCHL2Q9BQD1 86 aa7.72□□□□□ -1.17
CHMP4BP1-201ENST00000556017 CFC1BP0CG36 223 aa7.71□□□□□ -1.18
CHMP4BP1-201ENST00000556017 NMUP48645 174 aa7.71□□□□□ -1.18
CHMP4BP1-201ENST00000556017 NPC2P61916 151 aa7.71□□□□□ -1.18
CHMP4BP1-201ENST00000556017 A0A0J9YXY3 114 aa7.7□□□□□ -1.18
CHMP4BP1-201ENST00000556017 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
CHMP4BP1-201ENST00000556017 SNAPINO95295 136 aa7.7□□□□□ -1.18
CHMP4BP1-201ENST00000556017 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
CHMP4BP1-201ENST00000556017 SERF1AO75920 110 aa7.69□□□□□ -1.18
CHMP4BP1-201ENST00000556017 PLNP26678 52 aa7.69□□□□□ -1.18
CHMP4BP1-201ENST00000556017 SVBPQ8N300 66 aa7.69□□□□□ -1.18
CHMP4BP1-201ENST00000556017 LITAFQ99732 161 aa7.69□□□□□ -1.18
CHMP4BP1-201ENST00000556017 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
CHMP4BP1-201ENST00000556017 DPM2O94777 84 aa7.68□□□□□ -1.18
CHMP4BP1-201ENST00000556017 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
CHMP4BP1-201ENST00000556017 IGKCP01834 107 aa7.66□□□□□ -1.18
CHMP4BP1-201ENST00000556017 TRGC2P03986 189 aa7.66□□□□□ -1.18
CHMP4BP1-201ENST00000556017 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
CHMP4BP1-201ENST00000556017 E9PLD3 99 aa7.64□□□□□ -1.19
CHMP4BP1-201ENST00000556017 FABP4P15090 132 aa7.64□□□□□ -1.19
CHMP4BP1-201ENST00000556017 LINC00308Q8TCZ7 52 aa7.64□□□□□ -1.19
CHMP4BP1-201ENST00000556017 HERVK_113P61574 105 aa7.63□□□□□ -1.19
CHMP4BP1-201ENST00000556017 CD164Q04900 197 aa7.63□□□□□ -1.19
CHMP4BP1-201ENST00000556017 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
CHMP4BP1-201ENST00000556017 Q5XG85 94 aa7.63□□□□□ -1.19
CHMP4BP1-201ENST00000556017 SMIM29Q86T20 159 aa7.63□□□□□ -1.19
CHMP4BP1-201ENST00000556017 A0A0G2JQZ4 141 aa7.62□□□□□ -1.19
CHMP4BP1-201ENST00000556017 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
CHMP4BP1-201ENST00000556017 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
CHMP4BP1-201ENST00000556017 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
CHMP4BP1-201ENST00000556017 H7C2G1 150 aa7.61□□□□□ -1.19
CHMP4BP1-201ENST00000556017 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
CHMP4BP1-201ENST00000556017 Q1RN00 199 aa7.61□□□□□ -1.19
CHMP4BP1-201ENST00000556017 LAMTOR3Q9UHA4 124 aa7.61□□□□□ -1.19
CHMP4BP1-201ENST00000556017 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
CHMP4BP1-201ENST00000556017 NDUFA5Q16718 116 aa7.6□□□□□ -1.19
CHMP4BP1-201ENST00000556017 SLC25A34Q6PIV7 304 aa7.6□□□□□ -1.19
CHMP4BP1-201ENST00000556017 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.19
CHMP4BP1-201ENST00000556017 TIMM17BO60830 172 aa7.58□□□□□ -1.2
CHMP4BP1-201ENST00000556017 C6orf99Q4VX62 202 aa7.58□□□□□ -1.2
CHMP4BP1-201ENST00000556017 OR13C6PQ8NH95 151 aa7.58□□□□□ -1.2
CHMP4BP1-201ENST00000556017 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
CHMP4BP1-201ENST00000556017 TTTY13Q9BZ97 58 aa7.58□□□□□ -1.2
CHMP4BP1-201ENST00000556017 COX7BP24311 80 aa7.57□□□□□ -1.2
CHMP4BP1-201ENST00000556017 PRO1933Q9H354 126 aa7.57□□□□□ -1.2
CHMP4BP1-201ENST00000556017 CBY1Q9Y3M2 126 aa7.57□□□□□ -1.2
CHMP4BP1-201ENST00000556017 DEFB105AQ8NG35 78 aa7.56□□□□□ -1.2
CHMP4BP1-201ENST00000556017 IGLV5-48A0A075B6I7 105 aa7.55□□□□□ -1.2
CHMP4BP1-201ENST00000556017 TEX49A0A1B0GTD5 131 aa7.55□□□□□ -1.2
CHMP4BP1-201ENST00000556017 M0R2T5 61 aa7.55□□□□□ -1.2
CHMP4BP1-201ENST00000556017 TAL2Q16559 108 aa7.54□□□□□ -1.2
CHMP4BP1-201ENST00000556017 COLCA2A8K830 154 aa7.53□□□□□ -1.2
CHMP4BP1-201ENST00000556017 SYS1-DBNDD2H3BUS1 97 aa7.53□□□□□ -1.2
CHMP4BP1-201ENST00000556017 AKR1D1P51857 326 aa7.53□□□□□ -1.2
CHMP4BP1-201ENST00000556017 TRBV7-6A0A0J9YX20 115 aa7.52□□□□□ -1.21
CHMP4BP1-201ENST00000556017 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
CHMP4BP1-201ENST00000556017 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
CHMP4BP1-201ENST00000556017 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
CHMP4BP1-201ENST00000556017 LINC00518Q8N0U6 118 aa7.5□□□□□ -1.21
CHMP4BP1-201ENST00000556017 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
CHMP4BP1-201ENST00000556017 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
CHMP4BP1-201ENST00000556017 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
CHMP4BP1-201ENST00000556017 USH2AO75445 5202 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BKO60814 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BJP06899 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BOP23527 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BBP33778 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BDP58876 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BCP62807 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST2H2BEQ16778 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BHQ93079 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BNQ99877 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 HIST1H2BMQ99879 126 aa7.44□□□□□ -1.22
CHMP4BP1-201ENST00000556017 SSPOA2VEC9 5147 aa7.43□□□□□ -1.22
CHMP4BP1-201ENST00000556017 PET117Q6UWS5 81 aa7.43□□□□□ -1.22
CHMP4BP1-201ENST00000556017 C3orf79P0CE67 100 aa7.42□□□□□ -1.22
CHMP4BP1-201ENST00000556017 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
CHMP4BP1-201ENST00000556017 SMIM11BQ8TCY0 68 aa7.41□□□□□ -1.22
CHMP4BP1-201ENST00000556017 A6NDN8 102 aa7.4□□□□□ -1.22
CHMP4BP1-201ENST00000556017 TCL1BO95988 128 aa7.4□□□□□ -1.22
CHMP4BP1-201ENST00000556017 MUSTN1Q8IVN3 82 aa7.4□□□□□ -1.22
CHMP4BP1-201ENST00000556017 IFITM1P13164 125 aa7.39□□□□□ -1.23
CHMP4BP1-201ENST00000556017 A4D1N5 150 aa7.38□□□□□ -1.23
CHMP4BP1-201ENST00000556017 Q75L30 129 aa7.38□□□□□ -1.23
CHMP4BP1-201ENST00000556017 SLC7A5P1Q8MH63 180 aa7.38□□□□□ -1.23
CHMP4BP1-201ENST00000556017 SCGB1D4Q6XE38 83 aa7.37□□□□□ -1.23
CHMP4BP1-201ENST00000556017 PCP2Q8IVA1 136 aa7.37□□□□□ -1.23
CHMP4BP1-201ENST00000556017 OBSCN-AS1Q96MR7 158 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms