RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 TRGC2P03986 189 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 GAGE2AQ6NT46 116 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 Q6ZRX8 168 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 DAND5Q8N907 189 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 MIEN1Q9BRT3 115 aa4.39□□□□□ -1.71
PTCSC3-201ENST00000556013 IGKCP01834 107 aa4.38□□□□□ -1.71
PTCSC3-201ENST00000556013 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
PTCSC3-201ENST00000556013 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
PTCSC3-201ENST00000556013 S100A7L2Q5SY68 101 aa4.38□□□□□ -1.71
PTCSC3-201ENST00000556013 SERF1AO75920 110 aa4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 ERC2-IT1O76042 136 aa4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 SNRPEP62304 92 aaKnown RBP4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 Q8N377 158 aa4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 Q9BRP9 147 aa4.37□□□□□ -1.71
PTCSC3-201ENST00000556013 E9PLD3 99 aa4.36□□□□□ -1.71
PTCSC3-201ENST00000556013 LINC00310P59036 64 aa4.36□□□□□ -1.71
PTCSC3-201ENST00000556013 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 H0Y8G0 127 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 SPRR1BP22528 89 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 S100A2P29034 98 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 MOBPQ13875 183 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
PTCSC3-201ENST00000556013 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 TIMM17BO60830 172 aa4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 FABP4P15090 132 aa4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 ADAMTSL4-AS1Q5T5F5 129 aa4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 XP32Q5T750 250 aa4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
PTCSC3-201ENST00000556013 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
PTCSC3-201ENST00000556013 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
PTCSC3-201ENST00000556013 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
PTCSC3-201ENST00000556013 LIMD2Q9BT23 127 aa4.32□□□□□ -1.72
PTCSC3-201ENST00000556013 TSTD3H0UI37 97 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 CD164Q04900 197 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 PET117Q6UWS5 81 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 LINC00308Q8TCZ7 52 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 LITAFQ99732 161 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 PMCHL2Q9BQD1 86 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 SPANXDQ9BXN6 97 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
PTCSC3-201ENST00000556013 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
PTCSC3-201ENST00000556013 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
PTCSC3-201ENST00000556013 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
PTCSC3-201ENST00000556013 ELOF1P60002 83 aaKnown RBP4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 Q5XG85 94 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 Q6ZVH6 145 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 ST20-AS1Q8NBB2 130 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 OR13C6PQ8NH95 151 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 KRTAP4-1Q9BYQ7 146 aa4.29□□□□□ -1.72
PTCSC3-201ENST00000556013 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
PTCSC3-201ENST00000556013 NPC2P61916 151 aa4.28□□□□□ -1.72
PTCSC3-201ENST00000556013 PYY3Q5JQD4 70 aa4.28□□□□□ -1.72
PTCSC3-201ENST00000556013 HIST3H2BBQ8N257 126 aa4.28□□□□□ -1.72
PTCSC3-201ENST00000556013 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
PTCSC3-201ENST00000556013 TEX49A0A1B0GTD5 131 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 A4D1N5 150 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BKO60814 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BJP06899 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 IFITM1P13164 125 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BOP23527 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 COX7BP24311 80 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BBP33778 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BDP58876 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BCP62807 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 TAL2Q16559 108 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST2H2BEQ16778 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BHQ93079 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BNQ99877 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BMQ99879 126 aa4.27□□□□□ -1.73
PTCSC3-201ENST00000556013 A0A1B0GWB2 263 aa4.26□□□□□ -1.73
PTCSC3-201ENST00000556013 C6orf99Q4VX62 202 aa4.26□□□□□ -1.73
PTCSC3-201ENST00000556013 C14orf144Q96I85 54 aa4.26□□□□□ -1.73
PTCSC3-201ENST00000556013 IGLV5-48A0A075B6I7 105 aa4.25□□□□□ -1.73
PTCSC3-201ENST00000556013 H7C2G1 150 aa4.24□□□□□ -1.73
PTCSC3-201ENST00000556013 C3orf79P0CE67 100 aa4.24□□□□□ -1.73
PTCSC3-201ENST00000556013 HIST1H2BLQ99880 126 aa4.24□□□□□ -1.73
PTCSC3-201ENST00000556013 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
PTCSC3-201ENST00000556013 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
PTCSC3-201ENST00000556013 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
PTCSC3-201ENST00000556013 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 A0A1B0GV90 55 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 C20orf202A1L168 122 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 HRCT1Q6UXD1 115 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 DEFB105AQ8NG35 78 aa4.22□□□□□ -1.73
PTCSC3-201ENST00000556013 IGLV8-61A0A075B6I0 122 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms