RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 SCGB1D1O95968 90 aa13.66□□□□□ -0.22
CDKN3-208ENST00000555837 SOSTDC1Q6X4U4 206 aa13.65□□□□□ -0.22
CDKN3-208ENST00000555837 TTTY13Q9BZ97 58 aa13.65□□□□□ -0.22
CDKN3-208ENST00000555837 TRAV23DV6A0A075B6W5 121 aa13.64□□□□□ -0.23
CDKN3-208ENST00000555837 OR13C6PQ8NH95 151 aa13.63□□□□□ -0.23
CDKN3-208ENST00000555837 TYMSOSQ8TAI1 123 aa13.62□□□□□ -0.23
CDKN3-208ENST00000555837 KRTAP4-16G5E9R7 235 aaPredicted RBP13.61□□□□□ -0.23
CDKN3-208ENST00000555837 PCP2Q8IVA1 136 aa13.6□□□□□ -0.23
CDKN3-208ENST00000555837 ZNF73O43830 326 aaPredicted RBP13.59□□□□□ -0.23
CDKN3-208ENST00000555837 TNXBP22105 4242 aa13.58□□□□□ -0.24
CDKN3-208ENST00000555837 B5MCH6 92 aa13.58□□□□□ -0.24
CDKN3-208ENST00000555837 Q6ZRX8 168 aa13.58□□□□□ -0.24
CDKN3-208ENST00000555837 EIF4EBP3O60516 100 aaPredicted RBP13.56□□□□□ -0.24
CDKN3-208ENST00000555837 SMCR5Q8TEV8 140 aa13.56□□□□□ -0.24
CDKN3-208ENST00000555837 SPRR4Q96PI1 79 aa13.55□□□□□ -0.24
CDKN3-208ENST00000555837 A0A087X002 238 aa13.54□□□□□ -0.24
CDKN3-208ENST00000555837 CTAG1AP78358 180 aa13.54□□□□□ -0.24
CDKN3-208ENST00000555837 TRAV13-2A0A0B4J235 113 aa13.51□□□□□ -0.25
CDKN3-208ENST00000555837 MUSTN1Q8IVN3 82 aa13.51□□□□□ -0.25
CDKN3-208ENST00000555837 ANAPC11Q9NYG5 84 aa13.5□□□□□ -0.25
CDKN3-208ENST00000555837 A6NDN8 102 aa13.49□□□□□ -0.25
CDKN3-208ENST00000555837 DHRS4-AS1Q9P1J3 65 aa13.49□□□□□ -0.25
CDKN3-208ENST00000555837 TRBV7-6A0A0J9YX20 115 aa13.47□□□□□ -0.25
CDKN3-208ENST00000555837 DLEU1O43261 78 aa13.46□□□□□ -0.25
CDKN3-208ENST00000555837 COX8AP10176 69 aa13.46□□□□□ -0.25
CDKN3-208ENST00000555837 SPAG11AQ6PDA7 123 aa13.45□□□□□ -0.26
CDKN3-208ENST00000555837 LINC00304Q8N9R0 145 aa13.45□□□□□ -0.26
CDKN3-208ENST00000555837 VAMP8Q9BV40 100 aa13.45□□□□□ -0.26
CDKN3-208ENST00000555837 KRTAP13-2Q52LG2 175 aa13.44□□□□□ -0.26
CDKN3-208ENST00000555837 LINC00483Q53H64 154 aa13.44□□□□□ -0.26
CDKN3-208ENST00000555837 C4orf48Q5BLP8 95 aa13.44□□□□□ -0.26
CDKN3-208ENST00000555837 GAGE2AQ6NT46 116 aa13.44□□□□□ -0.26
CDKN3-208ENST00000555837 Q9BRP9 147 aa13.44□□□□□ -0.26
CDKN3-208ENST00000555837 A4D1N5 150 aa13.43□□□□□ -0.26
CDKN3-208ENST00000555837 COX7BP24311 80 aa13.43□□□□□ -0.26
CDKN3-208ENST00000555837 SLC25A34Q6PIV7 304 aa13.43□□□□□ -0.26
CDKN3-208ENST00000555837 C6orf99Q4VX62 202 aa13.42□□□□□ -0.26
CDKN3-208ENST00000555837 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
CDKN3-208ENST00000555837 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
CDKN3-208ENST00000555837 ELOF1P60002 83 aaKnown RBP13.41□□□□□ -0.26
CDKN3-208ENST00000555837 VAMP3Q15836 100 aa13.39□□□□□ -0.27
CDKN3-208ENST00000555837 SPATA45Q537H7 98 aa13.39□□□□□ -0.27
CDKN3-208ENST00000555837 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
CDKN3-208ENST00000555837 PAM16Q9Y3D7 125 aa13.39□□□□□ -0.27
CDKN3-208ENST00000555837 ERC2-IT1O76042 136 aa13.38□□□□□ -0.27
CDKN3-208ENST00000555837 TSPAN13O95857 204 aa13.38□□□□□ -0.27
CDKN3-208ENST00000555837 HMCN2Q8NDA2 5059 aa13.37□□□□□ -0.27
CDKN3-208ENST00000555837 SSBP3-AS1Q7Z2R9 100 aa13.37□□□□□ -0.27
CDKN3-208ENST00000555837 C3orf22Q8N5N4 141 aa13.35□□□□□ -0.27
CDKN3-208ENST00000555837 HIGD1BQ9P298 99 aa13.35□□□□□ -0.27
CDKN3-208ENST00000555837 SLC25A20O43772 301 aa13.33□□□□□ -0.28
CDKN3-208ENST00000555837 PRR4Q16378 134 aa13.33□□□□□ -0.28
CDKN3-208ENST00000555837 C14orf144Q96I85 54 aa13.33□□□□□ -0.28
CDKN3-208ENST00000555837 TMA7Q9Y2S6 64 aaKnown RBP13.31□□□□□ -0.28
CDKN3-208ENST00000555837 IGLV9-49A0A0B4J1Y8 123 aa13.3□□□□□ -0.28
CDKN3-208ENST00000555837 SPINK1P00995 79 aa13.3□□□□□ -0.28
CDKN3-208ENST00000555837 TAL2Q16559 108 aa13.3□□□□□ -0.28
CDKN3-208ENST00000555837 SMIM11BQ8TCY0 68 aa13.3□□□□□ -0.28
CDKN3-208ENST00000555837 LAMTOR3Q9UHA4 124 aa13.3□□□□□ -0.28
CDKN3-208ENST00000555837 Q8NBF4 154 aa13.29□□□□□ -0.28
CDKN3-208ENST00000555837 SPRR1BP22528 89 aa13.28□□□□□ -0.28
CDKN3-208ENST00000555837 MOBPQ13875 183 aa13.28□□□□□ -0.28
CDKN3-208ENST00000555837 C9orf153Q5TBE3 101 aa13.27□□□□□ -0.29
CDKN3-208ENST00000555837 TEX49A0A1B0GTD5 131 aa13.26□□□□□ -0.29
CDKN3-208ENST00000555837 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
CDKN3-208ENST00000555837 A6NJY4 79 aa13.26□□□□□ -0.29
CDKN3-208ENST00000555837 ST20-AS1Q8NBB2 130 aa13.26□□□□□ -0.29
CDKN3-208ENST00000555837 BVES-AS1Q5T3Y7 98 aa13.25□□□□□ -0.29
CDKN3-208ENST00000555837 SNCGO76070 127 aa13.24□□□□□ -0.29
CDKN3-208ENST00000555837 RAB37Q96AX2 223 aa13.24□□□□□ -0.29
CDKN3-208ENST00000555837 RPS29P62273 56 aaKnown RBP13.23□□□□□ -0.29
CDKN3-208ENST00000555837 PYY3Q5JQD4 70 aa13.22□□□□□ -0.29
CDKN3-208ENST00000555837 DEFB105AQ8NG35 78 aa13.2□□□□□ -0.3
CDKN3-208ENST00000555837 A0A0B4J2C4 111 aa13.18□□□□□ -0.3
CDKN3-208ENST00000555837 C12orf57Q99622 126 aa13.18□□□□□ -0.3
CDKN3-208ENST00000555837 CEND1Q8N111 149 aa13.17□□□□□ -0.3
CDKN3-208ENST00000555837 IGLV5-48A0A075B6I7 105 aa13.16□□□□□ -0.3
CDKN3-208ENST00000555837 hADV29S1A0JD25 119 aa13.16□□□□□ -0.3
CDKN3-208ENST00000555837 LINC00575Q6W349 94 aa13.16□□□□□ -0.3
CDKN3-208ENST00000555837 C2orf91Q6ZV80 131 aa13.16□□□□□ -0.3
CDKN3-208ENST00000555837 FP248Q71RG6 208 aaPredicted RBP13.16□□□□□ -0.3
CDKN3-208ENST00000555837 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
CDKN3-208ENST00000555837 CFC1P0CG37 223 aa13.14□□□□□ -0.31
CDKN3-208ENST00000555837 PRO1933Q9H354 126 aa13.13□□□□□ -0.31
CDKN3-208ENST00000555837 H0YGX0 51 aa13.12□□□□□ -0.31
CDKN3-208ENST00000555837 UQCR10Q9UDW1 63 aa13.12□□□□□ -0.31
CDKN3-208ENST00000555837 F8WEM9 126 aa13.11□□□□□ -0.31
CDKN3-208ENST00000555837 HSD52Q0P140 79 aa13.11□□□□□ -0.31
CDKN3-208ENST00000555837 LIMD2Q9BT23 127 aa13.11□□□□□ -0.31
CDKN3-208ENST00000555837 IGLV7-46A0A075B6I9 117 aa13.1□□□□□ -0.31
CDKN3-208ENST00000555837 H7C2G1 150 aa13.1□□□□□ -0.31
CDKN3-208ENST00000555837 GHRHP01286 108 aa13.1□□□□□ -0.31
CDKN3-208ENST00000555837 Q1RN00 199 aa13.1□□□□□ -0.31
CDKN3-208ENST00000555837 RETNLBQ9BQ08 111 aa13.1□□□□□ -0.31
CDKN3-208ENST00000555837 PRO1854Q9UHT4 67 aa13.1□□□□□ -0.31
CDKN3-208ENST00000555837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.09□□□□□ -0.31
CDKN3-208ENST00000555837 PPDPFLQ8WWR9 84 aa13.09□□□□□ -0.31
CDKN3-208ENST00000555837 CD164Q04900 197 aa13.08□□□□□ -0.32
CDKN3-208ENST00000555837 TPRXLQ17RH7 258 aa13.06□□□□□ -0.32
CDKN3-208ENST00000555837 OCIAD2Q56VL3 154 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms