RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-233ENST00000555816 AMMECR1LQ6DCA0 310 aa2.86□□□□□ -1.95
ATXN3-233ENST00000555816 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-233ENST00000555816 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
ATXN3-233ENST00000555816 LINC00526Q96FQ7 95 aa2.86□□□□□ -1.95
ATXN3-233ENST00000555816 MRAP2Q96G30 205 aa2.86□□□□□ -1.95
ATXN3-233ENST00000555816 C20orf78Q9BR46 151 aa2.86□□□□□ -1.95
ATXN3-233ENST00000555816 CST9LQ9H4G1 147 aa2.86□□□□□ -1.95
ATXN3-233ENST00000555816 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 DPM2O94777 84 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 TSPAN13O95857 204 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 IGKCP01834 107 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 SMIM13P0DJ93 91 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 XCL1P47992 114 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 ORMDL2Q53FV1 153 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 LINC00173Q6ZV60 143 aa2.85□□□□□ -1.95
ATXN3-233ENST00000555816 IGLV4-69A0A075B6H9 119 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 APOMO95445 188 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 NPYP01303 97 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 MGPP08493 103 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-233ENST00000555816 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-233ENST00000555816 NCR2O95944 276 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 SS18Q15532 418 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 KRTAP11-1Q8IUC1 163 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 TMEM101Q96IK0 257 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-233ENST00000555816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-233ENST00000555816 IGKV2-29A2NJV5 120 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-233ENST00000555816 F8VRH5 84 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 H0Y8G0 127 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 NMUP48645 174 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 RPL18AQ02543 176 aaKnown RBP2.82□□□□□ -1.96
ATXN3-233ENST00000555816 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 SMIM2Q9BVW6 85 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 ANAPC11Q9NYG5 84 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-233ENST00000555816 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
ATXN3-233ENST00000555816 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
ATXN3-233ENST00000555816 COX7A2LO14548 114 aa2.81□□□□□ -1.96
ATXN3-233ENST00000555816 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-233ENST00000555816 HERVK_113P61574 105 aa2.81□□□□□ -1.96
ATXN3-233ENST00000555816 TP73-AS1Q9UF72 201 aa2.81□□□□□ -1.96
ATXN3-233ENST00000555816 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 TRBV6-5A0A0K0K1A5 114 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 SMKR1H3BMG3 65 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 M0QXV9 152 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 CRYGAP11844 174 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 UBE2BP63146 152 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 CDC42SE2Q9NRR3 84 aa2.8□□□□□ -1.96
ATXN3-233ENST00000555816 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-233ENST00000555816 MRPL35Q9NZE8 188 aaKnown RBP2.8□□□□□ -1.96
ATXN3-233ENST00000555816 CHTOPQ9Y3Y2 248 aaKnown RBP2.8□□□□□ -1.96
ATXN3-233ENST00000555816 SDHAF1A6NFY7 115 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 I3L3M4 83 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 TLX1NBP0CAT3 122 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-233ENST00000555816 LINC00167Q96N53 147 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 CYSLTR1Q9Y271 337 aa2.79□□□□□ -1.96
ATXN3-233ENST00000555816 IGKV2D-26A0A0A0MRZ7 120 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 TRBV27A0A0K0K1C4 114 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 POLR2KP53803 58 aaKnown RBP2.78□□□□□ -1.96
ATXN3-233ENST00000555816 SPAG11BQ08648 103 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 PMVKQ15126 192 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 C5orf38Q86SI9 138 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 RPL39LQ96EH5 51 aaKnown RBP2.78□□□□□ -1.96
ATXN3-233ENST00000555816 SPANXA1Q9NS26 97 aa2.78□□□□□ -1.96
ATXN3-233ENST00000555816 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-233ENST00000555816 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 NDUFA1O15239 70 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 SEC61GP60059 68 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 SMAGPQ0VAQ4 97 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
ATXN3-233ENST00000555816 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms