RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
SRP54-206ENST00000555317 TRAV23DV6A0A075B6W5 121 aa7.2□□□□□ -1.26
SRP54-206ENST00000555317 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
SRP54-206ENST00000555317 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
SRP54-206ENST00000555317 TYMSOSQ8TAI1 123 aa7.2□□□□□ -1.26
SRP54-206ENST00000555317 SCGB1D1O95968 90 aa7.19□□□□□ -1.26
SRP54-206ENST00000555317 IGLV6-57P01721 117 aa7.19□□□□□ -1.26
SRP54-206ENST00000555317 SPRR1AP35321 89 aa7.19□□□□□ -1.26
SRP54-206ENST00000555317 ANAPC11Q9NYG5 84 aa7.19□□□□□ -1.26
SRP54-206ENST00000555317 A0A087X002 238 aa7.18□□□□□ -1.26
SRP54-206ENST00000555317 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
SRP54-206ENST00000555317 HINT1P49773 126 aaPredicted RBP7.18□□□□□ -1.26
SRP54-206ENST00000555317 PCP2Q8IVA1 136 aa7.18□□□□□ -1.26
SRP54-206ENST00000555317 LINC00518Q8N0U6 118 aa7.18□□□□□ -1.26
SRP54-206ENST00000555317 SPANXDQ9BXN6 97 aa7.18□□□□□ -1.26
SRP54-206ENST00000555317 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
SRP54-206ENST00000555317 IFITM1P13164 125 aa7.17□□□□□ -1.26
SRP54-206ENST00000555317 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
SRP54-206ENST00000555317 Q6ZVH6 145 aa7.17□□□□□ -1.26
SRP54-206ENST00000555317 C5orf52A6NGY3 159 aa7.16□□□□□ -1.26
SRP54-206ENST00000555317 B5MCH6 92 aa7.16□□□□□ -1.26
SRP54-206ENST00000555317 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
SRP54-206ENST00000555317 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
SRP54-206ENST00000555317 SPRR4Q96PI1 79 aa7.16□□□□□ -1.26
SRP54-206ENST00000555317 Q6ZRX8 168 aa7.15□□□□□ -1.26
SRP54-206ENST00000555317 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
SRP54-206ENST00000555317 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
SRP54-206ENST00000555317 TSPAN13O95857 204 aa7.12□□□□□ -1.27
SRP54-206ENST00000555317 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
SRP54-206ENST00000555317 MUSTN1Q8IVN3 82 aa7.12□□□□□ -1.27
SRP54-206ENST00000555317 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
SRP54-206ENST00000555317 PPDPFQ9H3Y8 114 aa7.12□□□□□ -1.27
SRP54-206ENST00000555317 A6NDN8 102 aa7.11□□□□□ -1.27
SRP54-206ENST00000555317 Q9BRP9 147 aa7.11□□□□□ -1.27
SRP54-206ENST00000555317 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
SRP54-206ENST00000555317 C3orf22Q8N5N4 141 aa7.09□□□□□ -1.27
SRP54-206ENST00000555317 DHRS4-AS1Q9P1J3 65 aa7.09□□□□□ -1.27
SRP54-206ENST00000555317 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 COX7BP24311 80 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 PRR4Q16378 134 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 C6orf99Q4VX62 202 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
SRP54-206ENST00000555317 COX8AP10176 69 aa7.07□□□□□ -1.28
SRP54-206ENST00000555317 VAMP8Q9BV40 100 aa7.07□□□□□ -1.28
SRP54-206ENST00000555317 IGLV9-49A0A0B4J1Y8 123 aa7.06□□□□□ -1.28
SRP54-206ENST00000555317 HIST1H4GQ99525 98 aa7.06□□□□□ -1.28
SRP54-206ENST00000555317 PAM16Q9Y3D7 125 aa7.06□□□□□ -1.28
SRP54-206ENST00000555317 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
SRP54-206ENST00000555317 LRP2P98164 4655 aa7.06□□□□□ -1.28
SRP54-206ENST00000555317 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
SRP54-206ENST00000555317 ELOF1P60002 83 aaKnown RBP7.05□□□□□ -1.28
SRP54-206ENST00000555317 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
SRP54-206ENST00000555317 SPAG11AQ6PDA7 123 aa7.05□□□□□ -1.28
SRP54-206ENST00000555317 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
SRP54-206ENST00000555317 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
SRP54-206ENST00000555317 MOBPQ13875 183 aa7.04□□□□□ -1.28
SRP54-206ENST00000555317 C9orf153Q5TBE3 101 aa7.04□□□□□ -1.28
SRP54-206ENST00000555317 SLC25A34Q6PIV7 304 aa7.04□□□□□ -1.28
SRP54-206ENST00000555317 Q8NBF4 154 aa7.04□□□□□ -1.28
SRP54-206ENST00000555317 A4D1N5 150 aa7.03□□□□□ -1.28
SRP54-206ENST00000555317 DLEU1O43261 78 aa7.03□□□□□ -1.28
SRP54-206ENST00000555317 CTAG1AP78358 180 aa7.03□□□□□ -1.28
SRP54-206ENST00000555317 ST20-AS1Q8NBB2 130 aa7.03□□□□□ -1.28
SRP54-206ENST00000555317 C14orf144Q96I85 54 aa7.03□□□□□ -1.28
SRP54-206ENST00000555317 VAMP3Q15836 100 aa7.02□□□□□ -1.29
SRP54-206ENST00000555317 NHP2Q9NX24 153 aaKnown RBP7.02□□□□□ -1.29
SRP54-206ENST00000555317 SLC25A20O43772 301 aa7□□□□□ -1.29
SRP54-206ENST00000555317 TAL2Q16559 108 aa7□□□□□ -1.29
SRP54-206ENST00000555317 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
SRP54-206ENST00000555317 SMIM11BQ8TCY0 68 aa7□□□□□ -1.29
SRP54-206ENST00000555317 C12orf57Q99622 126 aa7□□□□□ -1.29
SRP54-206ENST00000555317 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
SRP54-206ENST00000555317 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
SRP54-206ENST00000555317 LAMTOR3Q9UHA4 124 aa6.99□□□□□ -1.29
SRP54-206ENST00000555317 SPINK1P00995 79 aa6.98□□□□□ -1.29
SRP54-206ENST00000555317 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
SRP54-206ENST00000555317 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
SRP54-206ENST00000555317 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
SRP54-206ENST00000555317 SPRR1BP22528 89 aa6.96□□□□□ -1.3
SRP54-206ENST00000555317 H7C2G1 150 aa6.95□□□□□ -1.3
SRP54-206ENST00000555317 Q1RN00 199 aa6.95□□□□□ -1.3
SRP54-206ENST00000555317 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
SRP54-206ENST00000555317 A6NJY4 79 aa6.94□□□□□ -1.3
SRP54-206ENST00000555317 PYY3Q5JQD4 70 aa6.94□□□□□ -1.3
SRP54-206ENST00000555317 BVES-AS1Q5T3Y7 98 aa6.94□□□□□ -1.3
SRP54-206ENST00000555317 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
SRP54-206ENST00000555317 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
SRP54-206ENST00000555317 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
SRP54-206ENST00000555317 LPAP08519 4548 aa6.92□□□□□ -1.3
SRP54-206ENST00000555317 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
SRP54-206ENST00000555317 LINC00575Q6W349 94 aa6.92□□□□□ -1.3
SRP54-206ENST00000555317 CEND1Q8N111 149 aa6.92□□□□□ -1.3
SRP54-206ENST00000555317 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
SRP54-206ENST00000555317 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
SRP54-206ENST00000555317 F8WEM9 126 aa6.91□□□□□ -1.3
SRP54-206ENST00000555317 SNCGO76070 127 aa6.91□□□□□ -1.3
SRP54-206ENST00000555317 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
SRP54-206ENST00000555317 CFC1P0CG37 223 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms