RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 CASC10Q5T4H9 136 aa10.8□□□□□ -0.68
PPP4R3A-205ENST00000554684 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
PPP4R3A-205ENST00000554684 C3orf22Q8N5N4 141 aa10.8□□□□□ -0.68
PPP4R3A-205ENST00000554684 PRR34Q9NV39 138 aa10.79□□□□□ -0.68
PPP4R3A-205ENST00000554684 C22orf24Q9Y442 160 aa10.79□□□□□ -0.68
PPP4R3A-205ENST00000554684 C1orf137Q5JT78 98 aa10.78□□□□□ -0.68
PPP4R3A-205ENST00000554684 C20orf197Q8N268 126 aa10.78□□□□□ -0.68
PPP4R3A-205ENST00000554684 FAM240AA0A1B0GVK7 77 aa10.77□□□□□ -0.69
PPP4R3A-205ENST00000554684 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.69
PPP4R3A-205ENST00000554684 NDUFS5O43920 106 aa10.77□□□□□ -0.69
PPP4R3A-205ENST00000554684 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
PPP4R3A-205ENST00000554684 LINC00474Q9P2X8 69 aa10.76□□□□□ -0.69
PPP4R3A-205ENST00000554684 Q6Q795 121 aa10.76□□□□□ -0.69
PPP4R3A-205ENST00000554684 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
PPP4R3A-205ENST00000554684 Q6ZRP5 223 aa10.75□□□□□ -0.69
PPP4R3A-205ENST00000554684 H0Y9J4 135 aa10.75□□□□□ -0.69
PPP4R3A-205ENST00000554684 WIPF1O43516 503 aa10.75□□□□□ -0.69
PPP4R3A-205ENST00000554684 A0A087WVE0 104 aa10.74□□□□□ -0.69
PPP4R3A-205ENST00000554684 F8WDY8 70 aa10.74□□□□□ -0.69
PPP4R3A-205ENST00000554684 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
PPP4R3A-205ENST00000554684 IMUPQ9GZP8 106 aa10.74□□□□□ -0.69
PPP4R3A-205ENST00000554684 LINC00846Q9NV44 126 aa10.74□□□□□ -0.69
PPP4R3A-205ENST00000554684 NDUFB1O75438 58 aa10.73□□□□□ -0.69
PPP4R3A-205ENST00000554684 FAM168BA1KXE4 195 aa10.72□□□□□ -0.69
PPP4R3A-205ENST00000554684 TGP01266 2768 aa10.72□□□□□ -0.69
PPP4R3A-205ENST00000554684 PHF5AQ7RTV0 110 aaKnown RBP10.72□□□□□ -0.69
PPP4R3A-205ENST00000554684 RTL8CO15255 209 aa10.71□□□□□ -0.69
PPP4R3A-205ENST00000554684 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
PPP4R3A-205ENST00000554684 COX7CP15954 63 aa10.7□□□□□ -0.7
PPP4R3A-205ENST00000554684 ATP5EP2Q5VTU8 51 aa10.7□□□□□ -0.7
PPP4R3A-205ENST00000554684 C15orf56Q8N910 161 aa10.69□□□□□ -0.7
PPP4R3A-205ENST00000554684 APLNQ9ULZ1 77 aa10.69□□□□□ -0.7
PPP4R3A-205ENST00000554684 C16orf90A8MZG2 172 aa10.69□□□□□ -0.7
PPP4R3A-205ENST00000554684 PRYO14603 147 aa10.68□□□□□ -0.7
PPP4R3A-205ENST00000554684 VPREB1P12018 145 aa10.67□□□□□ -0.7
PPP4R3A-205ENST00000554684 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
PPP4R3A-205ENST00000554684 SERP2Q8N6R1 65 aa10.66□□□□□ -0.7
PPP4R3A-205ENST00000554684 Q6JHZ5 121 aa10.65□□□□□ -0.7
PPP4R3A-205ENST00000554684 CIRBP-AS1Q8TBR5 109 aa10.65□□□□□ -0.71
PPP4R3A-205ENST00000554684 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
PPP4R3A-205ENST00000554684 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
PPP4R3A-205ENST00000554684 ELOF1P60002 83 aaKnown RBP10.62□□□□□ -0.71
PPP4R3A-205ENST00000554684 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
PPP4R3A-205ENST00000554684 WFDC13Q8IUB5 93 aa10.61□□□□□ -0.71
PPP4R3A-205ENST00000554684 SMR3BP02814 79 aaPredicted RBP10.61□□□□□ -0.71
PPP4R3A-205ENST00000554684 Q9BRP9 147 aa10.6□□□□□ -0.71
PPP4R3A-205ENST00000554684 Q6ZVQ6 151 aa10.6□□□□□ -0.71
PPP4R3A-205ENST00000554684 SNURFQ9Y675 71 aa10.6□□□□□ -0.71
PPP4R3A-205ENST00000554684 DEFB116Q30KQ4 102 aa10.59□□□□□ -0.71
PPP4R3A-205ENST00000554684 ST20-AS1Q8NBB2 130 aa10.58□□□□□ -0.72
PPP4R3A-205ENST00000554684 A0A087WSZ3 146 aa10.58□□□□□ -0.72
PPP4R3A-205ENST00000554684 MP68P56378 58 aa10.58□□□□□ -0.72
PPP4R3A-205ENST00000554684 TRBV7-7A0A0K0K1E9 115 aa10.57□□□□□ -0.72
PPP4R3A-205ENST00000554684 A0A087WTM6 91 aa10.57□□□□□ -0.72
PPP4R3A-205ENST00000554684 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
PPP4R3A-205ENST00000554684 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
PPP4R3A-205ENST00000554684 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
PPP4R3A-205ENST00000554684 Q8N9L7 120 aa10.56□□□□□ -0.72
PPP4R3A-205ENST00000554684 Q6ZRX8 168 aa10.56□□□□□ -0.72
PPP4R3A-205ENST00000554684 TMEM258P61165 79 aa10.55□□□□□ -0.72
PPP4R3A-205ENST00000554684 TNP2Q05952 138 aa10.55□□□□□ -0.72
PPP4R3A-205ENST00000554684 ZNF706Q9Y5V0 76 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-205ENST00000554684 LINC00476Q8WZB0 136 aa10.53□□□□□ -0.72
PPP4R3A-205ENST00000554684 TENM2Q9NT68 2774 aa10.53□□□□□ -0.72
PPP4R3A-205ENST00000554684 LINC01547P58512 204 aaPredicted RBP10.52□□□□□ -0.72
PPP4R3A-205ENST00000554684 TRBV7-6A0A0J9YX20 115 aa10.52□□□□□ -0.73
PPP4R3A-205ENST00000554684 SVIPQ8NHG7 77 aa10.51□□□□□ -0.73
PPP4R3A-205ENST00000554684 C5orf47Q569G3 176 aa10.51□□□□□ -0.73
PPP4R3A-205ENST00000554684 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
PPP4R3A-205ENST00000554684 Q6ZQT0 140 aa10.49□□□□□ -0.73
PPP4R3A-205ENST00000554684 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
PPP4R3A-205ENST00000554684 KRTAP1-5Q9BYS1 174 aa10.49□□□□□ -0.73
PPP4R3A-205ENST00000554684 BRK1Q8WUW1 75 aa10.48□□□□□ -0.73
PPP4R3A-205ENST00000554684 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
PPP4R3A-205ENST00000554684 KCNQ1DNQ9H478 68 aa10.47□□□□□ -0.73
PPP4R3A-205ENST00000554684 FAM30AQ9NZY2 134 aa10.47□□□□□ -0.73
PPP4R3A-205ENST00000554684 IGLV1-50A0A075B6I6 118 aa10.47□□□□□ -0.73
PPP4R3A-205ENST00000554684 C9orf163Q8N9P6 203 aa10.46□□□□□ -0.73
PPP4R3A-205ENST00000554684 A0A1W2PNN7 141 aa10.45□□□□□ -0.74
PPP4R3A-205ENST00000554684 IGKV4-1P06312 121 aa10.45□□□□□ -0.74
PPP4R3A-205ENST00000554684 MOBPQ13875 183 aa10.44□□□□□ -0.74
PPP4R3A-205ENST00000554684 VPS13CQ709C8 3753 aa10.44□□□□□ -0.74
PPP4R3A-205ENST00000554684 Q8NDZ9 215 aa10.43□□□□□ -0.74
PPP4R3A-205ENST00000554684 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
PPP4R3A-205ENST00000554684 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
PPP4R3A-205ENST00000554684 PRR4Q16378 134 aa10.43□□□□□ -0.74
PPP4R3A-205ENST00000554684 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3A-205ENST00000554684 TRRAPQ9Y4A5 3859 aa10.41□□□□□ -0.74
PPP4R3A-205ENST00000554684 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
PPP4R3A-205ENST00000554684 LOC110117498A0A087WWA1 95 aa10.4□□□□□ -0.74
PPP4R3A-205ENST00000554684 TLX1NBP0CAT3 122 aa10.39□□□□□ -0.75
PPP4R3A-205ENST00000554684 TRAV7A0A075B6U4 112 aa10.38□□□□□ -0.75
PPP4R3A-205ENST00000554684 Q8NBF4 154 aa10.38□□□□□ -0.75
PPP4R3A-205ENST00000554684 Q8N377 158 aa10.37□□□□□ -0.75
PPP4R3A-205ENST00000554684 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
PPP4R3A-205ENST00000554684 SPACA4Q8TDM5 124 aa10.36□□□□□ -0.75
PPP4R3A-205ENST00000554684 IGHV6-1A0A0B4J1U7 121 aa10.36□□□□□ -0.75
PPP4R3A-205ENST00000554684 ERC2-IT1O76042 136 aa10.36□□□□□ -0.75
PPP4R3A-205ENST00000554684 CRYGAP11844 174 aa10.36□□□□□ -0.75
PPP4R3A-205ENST00000554684 CXCL6P80162 114 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms