RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
ATXN3-224ENST00000554040 TOMM6Q96B49 74 aa3.53□□□□□ -1.84
ATXN3-224ENST00000554040 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
ATXN3-224ENST00000554040 TRAV9-1A0A075B6T8 112 aa3.52□□□□□ -1.85
ATXN3-224ENST00000554040 G0S2P27469 103 aa3.52□□□□□ -1.85
ATXN3-224ENST00000554040 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
ATXN3-224ENST00000554040 SLC51BQ86UW2 128 aa3.52□□□□□ -1.85
ATXN3-224ENST00000554040 H3BRM9 83 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 MT1FP04733 61 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 SRP19P09132 144 aaKnown RBP3.51□□□□□ -1.85
ATXN3-224ENST00000554040 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 ERASQ7Z444 233 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 ZNF625Q96I27 306 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-224ENST00000554040 SCGB3A1Q96QR1 104 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 Q9BRP9 147 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 CST9LQ9H4G1 147 aa3.51□□□□□ -1.85
ATXN3-224ENST00000554040 ADCYAP1P18509 176 aa3.5□□□□□ -1.85
ATXN3-224ENST00000554040 HERV-K104P63124 156 aa3.5□□□□□ -1.85
ATXN3-224ENST00000554040 ADIRFQ15847 76 aa3.5□□□□□ -1.85
ATXN3-224ENST00000554040 ATP5L2Q7Z4Y8 100 aa3.5□□□□□ -1.85
ATXN3-224ENST00000554040 TRBV10-3A0A0K0K1G6 114 aa3.49□□□□□ -1.85
ATXN3-224ENST00000554040 C20orf202A1L168 122 aa3.49□□□□□ -1.85
ATXN3-224ENST00000554040 ATP6V1G1O75348 118 aa3.49□□□□□ -1.85
ATXN3-224ENST00000554040 LINC00158P58513 81 aa3.49□□□□□ -1.85
ATXN3-224ENST00000554040 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
ATXN3-224ENST00000554040 NXT2Q9NPJ8 142 aaKnown RBP3.49□□□□□ -1.85
ATXN3-224ENST00000554040 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 NCR3O14931 201 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 S100A12P80511 92 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 KIAA1644Q3SXP7 199 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 SFTA2Q6UW10 78 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 ALKAL2Q6UX46 152 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 BOD1L2Q8IYS8 172 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 LITAFQ99732 161 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 NAT8Q9UHE5 227 aa3.48□□□□□ -1.85
ATXN3-224ENST00000554040 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
ATXN3-224ENST00000554040 PMVKQ15126 192 aa3.47□□□□□ -1.85
ATXN3-224ENST00000554040 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
ATXN3-224ENST00000554040 Q5XG85 94 aa3.47□□□□□ -1.85
ATXN3-224ENST00000554040 Q6ZRX8 168 aa3.47□□□□□ -1.85
ATXN3-224ENST00000554040 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
ATXN3-224ENST00000554040 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
ATXN3-224ENST00000554040 LINC01549A6NIU2 74 aa3.46□□□□□ -1.86
ATXN3-224ENST00000554040 H0Y8G0 127 aa3.46□□□□□ -1.86
ATXN3-224ENST00000554040 IGLC3P0DOY3 106 aa3.46□□□□□ -1.86
ATXN3-224ENST00000554040 RGS21Q2M5E4 152 aa3.46□□□□□ -1.86
ATXN3-224ENST00000554040 ZNF22P17026 224 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-224ENST00000554040 CD164Q04900 197 aa3.45□□□□□ -1.86
ATXN3-224ENST00000554040 JOSD1Q15040 202 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-224ENST00000554040 ATP11AUNQ6ZP68 121 aa3.45□□□□□ -1.86
ATXN3-224ENST00000554040 KMT2DO14686 5537 aa3.45□□□□□ -1.86
ATXN3-224ENST00000554040 C9JQL5 133 aa3.44□□□□□ -1.86
ATXN3-224ENST00000554040 SMIM13P0DJ93 91 aa3.44□□□□□ -1.86
ATXN3-224ENST00000554040 SPRR1BP22528 89 aa3.44□□□□□ -1.86
ATXN3-224ENST00000554040 DDTP30046 118 aa3.44□□□□□ -1.86
ATXN3-224ENST00000554040 SLC25A34Q6PIV7 304 aa3.44□□□□□ -1.86
ATXN3-224ENST00000554040 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
ATXN3-224ENST00000554040 H7C2G1 150 aa3.43□□□□□ -1.86
ATXN3-224ENST00000554040 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
ATXN3-224ENST00000554040 MIR7-3HGQ8N6C7 128 aa3.43□□□□□ -1.86
ATXN3-224ENST00000554040 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
ATXN3-224ENST00000554040 TRBV10-2A0A0K0K1G8 114 aa3.42□□□□□ -1.86
ATXN3-224ENST00000554040 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
ATXN3-224ENST00000554040 FA2HQ7L5A8 372 aa3.42□□□□□ -1.86
ATXN3-224ENST00000554040 TRBV20-1A0A075B6N2 111 aa3.41□□□□□ -1.86
ATXN3-224ENST00000554040 NDUFA6P56556 154 aa3.41□□□□□ -1.86
ATXN3-224ENST00000554040 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
ATXN3-224ENST00000554040 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
ATXN3-224ENST00000554040 PRO1933Q9H354 126 aa3.41□□□□□ -1.86
ATXN3-224ENST00000554040 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
ATXN3-224ENST00000554040 C11orf86A6NJI1 115 aa3.4□□□□□ -1.87
ATXN3-224ENST00000554040 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
ATXN3-224ENST00000554040 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
ATXN3-224ENST00000554040 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
ATXN3-224ENST00000554040 TCTE3Q8IZS6 198 aa3.4□□□□□ -1.87
ATXN3-224ENST00000554040 TRAV23DV6A0A075B6W5 121 aa3.39□□□□□ -1.87
ATXN3-224ENST00000554040 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
ATXN3-224ENST00000554040 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-224ENST00000554040 LGALS3P17931 250 aaKnown RBP3.39□□□□□ -1.87
ATXN3-224ENST00000554040 AKR1D1P51857 326 aa3.39□□□□□ -1.87
ATXN3-224ENST00000554040 PEA15Q15121 130 aa3.39□□□□□ -1.87
ATXN3-224ENST00000554040 Q1RN00 199 aa3.39□□□□□ -1.87
ATXN3-224ENST00000554040 S100A7L2Q5SY68 101 aa3.38□□□□□ -1.87
ATXN3-224ENST00000554040 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
ATXN3-224ENST00000554040 SPANXB1Q9NS25 103 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-224ENST00000554040 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
ATXN3-224ENST00000554040 HINT1P49773 126 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-224ENST00000554040 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
ATXN3-224ENST00000554040 OBSCN-AS1Q96MR7 158 aa3.37□□□□□ -1.87
ATXN3-224ENST00000554040 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
ATXN3-224ENST00000554040 TCL1BO95988 128 aa3.36□□□□□ -1.87
ATXN3-224ENST00000554040 C6orf99Q4VX62 202 aa3.36□□□□□ -1.87
ATXN3-224ENST00000554040 BAGE3Q86Y29 109 aa3.36□□□□□ -1.87
ATXN3-224ENST00000554040 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
ATXN3-224ENST00000554040 DHRS4-AS1Q9P1J3 65 aa3.36□□□□□ -1.87
ATXN3-224ENST00000554040 A0A096LNJ9 63 aa3.35□□□□□ -1.87
ATXN3-224ENST00000554040 A0A0G2JQZ4 141 aa3.35□□□□□ -1.87
ATXN3-224ENST00000554040 FAM236DA0A1B0GTK5 79 aa3.35□□□□□ -1.87
ATXN3-224ENST00000554040 NDUFC2O95298 119 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms