RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 Q9BRP9 147 aa11.91□□□□□ -0.5
HIF1A-206ENST00000553999 IGLV6-57P01721 117 aa11.9□□□□□ -0.5
HIF1A-206ENST00000553999 Q8NBF4 154 aa11.9□□□□□ -0.5
HIF1A-206ENST00000553999 IGLV9-49A0A0B4J1Y8 123 aa11.89□□□□□ -0.51
HIF1A-206ENST00000553999 OR13C6PQ8NH95 151 aa11.89□□□□□ -0.51
HIF1A-206ENST00000553999 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
HIF1A-206ENST00000553999 Q6ZRX8 168 aa11.88□□□□□ -0.51
HIF1A-206ENST00000553999 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
HIF1A-206ENST00000553999 ZNF73O43830 326 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-206ENST00000553999 MOBPQ13875 183 aa11.86□□□□□ -0.51
HIF1A-206ENST00000553999 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
HIF1A-206ENST00000553999 C20orf202A1L168 122 aa11.85□□□□□ -0.51
HIF1A-206ENST00000553999 C4orf48Q5BLP8 95 aa11.85□□□□□ -0.51
HIF1A-206ENST00000553999 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
HIF1A-206ENST00000553999 IGLV7-46A0A075B6I9 117 aa11.83□□□□□ -0.52
HIF1A-206ENST00000553999 TIMM17BO60830 172 aa11.83□□□□□ -0.52
HIF1A-206ENST00000553999 SCGB1D4Q6XE38 83 aa11.83□□□□□ -0.52
HIF1A-206ENST00000553999 ST20-AS1Q8NBB2 130 aa11.83□□□□□ -0.52
HIF1A-206ENST00000553999 LINC00483Q53H64 154 aa11.82□□□□□ -0.52
HIF1A-206ENST00000553999 JOSD1Q15040 202 aaPredicted RBP11.79□□□□□ -0.52
HIF1A-206ENST00000553999 C9orf153Q5TBE3 101 aa11.79□□□□□ -0.52
HIF1A-206ENST00000553999 SPAG11AQ6PDA7 123 aa11.79□□□□□ -0.52
HIF1A-206ENST00000553999 PCP2Q8IVA1 136 aa11.78□□□□□ -0.52
HIF1A-206ENST00000553999 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
HIF1A-206ENST00000553999 HINT1P49773 126 aaPredicted RBP11.76□□□□□ -0.53
HIF1A-206ENST00000553999 SPANXDQ9BXN6 97 aa11.75□□□□□ -0.53
HIF1A-206ENST00000553999 S100A2P29034 98 aa11.73□□□□□ -0.53
HIF1A-206ENST00000553999 C6orf99Q4VX62 202 aa11.73□□□□□ -0.53
HIF1A-206ENST00000553999 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
HIF1A-206ENST00000553999 CBY1Q9Y3M2 126 aa11.72□□□□□ -0.53
HIF1A-206ENST00000553999 COX7BP24311 80 aa11.71□□□□□ -0.53
HIF1A-206ENST00000553999 TPRXLQ17RH7 258 aa11.71□□□□□ -0.53
HIF1A-206ENST00000553999 MUSTN1Q8IVN3 82 aa11.7□□□□□ -0.54
HIF1A-206ENST00000553999 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
HIF1A-206ENST00000553999 A6NDN8 102 aa11.69□□□□□ -0.54
HIF1A-206ENST00000553999 SPINK1P00995 79 aa11.69□□□□□ -0.54
HIF1A-206ENST00000553999 LINC00518Q8N0U6 118 aa11.69□□□□□ -0.54
HIF1A-206ENST00000553999 SSBP3-AS1Q7Z2R9 100 aa11.68□□□□□ -0.54
HIF1A-206ENST00000553999 DEFB105AQ8NG35 78 aa11.68□□□□□ -0.54
HIF1A-206ENST00000553999 CTAG1AP78358 180 aa11.67□□□□□ -0.54
HIF1A-206ENST00000553999 S100A1P23297 94 aa11.66□□□□□ -0.54
HIF1A-206ENST00000553999 ELOF1P60002 83 aaKnown RBP11.66□□□□□ -0.54
HIF1A-206ENST00000553999 HRCT1Q6UXD1 115 aa11.66□□□□□ -0.54
HIF1A-206ENST00000553999 DHRS4-AS1Q9P1J3 65 aa11.66□□□□□ -0.54
HIF1A-206ENST00000553999 S100A6P06703 90 aa11.64□□□□□ -0.55
HIF1A-206ENST00000553999 IFITM1P13164 125 aa11.64□□□□□ -0.55
HIF1A-206ENST00000553999 Q1RN00 199 aa11.63□□□□□ -0.55
HIF1A-206ENST00000553999 FP248Q71RG6 208 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-206ENST00000553999 Q8N377 158 aa11.63□□□□□ -0.55
HIF1A-206ENST00000553999 COPS9Q8WXC6 57 aa11.63□□□□□ -0.55
HIF1A-206ENST00000553999 HSBP1L1C9JCN9 74 aa11.61□□□□□ -0.55
HIF1A-206ENST00000553999 TAL2Q16559 108 aa11.61□□□□□ -0.55
HIF1A-206ENST00000553999 AKR1D1P51857 326 aa11.6□□□□□ -0.55
HIF1A-206ENST00000553999 SNRPEP62304 92 aaKnown RBP11.59□□□□□ -0.55
HIF1A-206ENST00000553999 KRTAP13-3Q3SY46 172 aa11.59□□□□□ -0.55
HIF1A-206ENST00000553999 SPRR1BP22528 89 aa11.58□□□□□ -0.56
HIF1A-206ENST00000553999 Q6ZVH6 145 aa11.58□□□□□ -0.56
HIF1A-206ENST00000553999 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
HIF1A-206ENST00000553999 C5orf52A6NGY3 159 aa11.56□□□□□ -0.56
HIF1A-206ENST00000553999 SLC25A20O43772 301 aa11.56□□□□□ -0.56
HIF1A-206ENST00000553999 SCGB1D1O95968 90 aa11.56□□□□□ -0.56
HIF1A-206ENST00000553999 SLC25A34Q6PIV7 304 aa11.56□□□□□ -0.56
HIF1A-206ENST00000553999 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
HIF1A-206ENST00000553999 MUC2Q02817 5179 aa11.55□□□□□ -0.56
HIF1A-206ENST00000553999 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
HIF1A-206ENST00000553999 RPS29P62273 56 aaKnown RBP11.54□□□□□ -0.56
HIF1A-206ENST00000553999 C12orf57Q99622 126 aa11.54□□□□□ -0.56
HIF1A-206ENST00000553999 TRAV13-2A0A0B4J235 113 aa11.53□□□□□ -0.56
HIF1A-206ENST00000553999 A0A0G2JQZ4 141 aa11.53□□□□□ -0.56
HIF1A-206ENST00000553999 A0A0U1RQV1 116 aa11.52□□□□□ -0.57
HIF1A-206ENST00000553999 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
HIF1A-206ENST00000553999 TEX49A0A1B0GTD5 131 aa11.51□□□□□ -0.57
HIF1A-206ENST00000553999 A4D1N5 150 aa11.51□□□□□ -0.57
HIF1A-206ENST00000553999 H7C2G1 150 aa11.51□□□□□ -0.57
HIF1A-206ENST00000553999 LINC01547P58512 204 aaPredicted RBP11.48□□□□□ -0.57
HIF1A-206ENST00000553999 SMIM29Q86T20 159 aa11.47□□□□□ -0.57
HIF1A-206ENST00000553999 MUC17Q685J3 4493 aa11.46□□□□□ -0.57
HIF1A-206ENST00000553999 PRO1933Q9H354 126 aa11.46□□□□□ -0.57
HIF1A-206ENST00000553999 HIST1H4GQ99525 98 aa11.45□□□□□ -0.58
HIF1A-206ENST00000553999 LIMD2Q9BT23 127 aa11.45□□□□□ -0.58
HIF1A-206ENST00000553999 IGLV5-48A0A075B6I7 105 aa11.43□□□□□ -0.58
HIF1A-206ENST00000553999 NHP2Q9NX24 153 aaKnown RBP11.42□□□□□ -0.58
HIF1A-206ENST00000553999 C9orf92A6NGG3 77 aa11.41□□□□□ -0.58
HIF1A-206ENST00000553999 COX8AP10176 69 aa11.41□□□□□ -0.58
HIF1A-206ENST00000553999 VAMP3Q15836 100 aa11.41□□□□□ -0.58
HIF1A-206ENST00000553999 C14orf144Q96I85 54 aa11.41□□□□□ -0.58
HIF1A-206ENST00000553999 PAM16Q9Y3D7 125 aa11.41□□□□□ -0.58
HIF1A-206ENST00000553999 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
HIF1A-206ENST00000553999 XP32Q5T750 250 aa11.39□□□□□ -0.59
HIF1A-206ENST00000553999 LINC00575Q6W349 94 aa11.39□□□□□ -0.59
HIF1A-206ENST00000553999 Q6ZQY7 126 aa11.38□□□□□ -0.59
HIF1A-206ENST00000553999 KRTAP4-1Q9BYQ7 146 aa11.38□□□□□ -0.59
HIF1A-206ENST00000553999 SEC61BP60468 96 aaKnown RBP11.37□□□□□ -0.59
HIF1A-206ENST00000553999 SPATA45Q537H7 98 aa11.36□□□□□ -0.59
HIF1A-206ENST00000553999 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
HIF1A-206ENST00000553999 F8WEM9 126 aa11.35□□□□□ -0.59
HIF1A-206ENST00000553999 CD164Q04900 197 aa11.34□□□□□ -0.59
HIF1A-206ENST00000553999 VAMP8Q9BV40 100 aa11.32□□□□□ -0.6
HIF1A-206ENST00000553999 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
HIF1A-206ENST00000553999 FAT4Q6V0I7 4981 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms