RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 SPANXB1Q9NS25 103 aaPredicted RBP10.27□□□□□ -0.77
FOXN3-204ENST00000553840 ZNF815PA8K554 130 aa10.26□□□□□ -0.77
FOXN3-204ENST00000553840 KRTAP4-16G5E9R7 235 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-204ENST00000553840 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
FOXN3-204ENST00000553840 C4orf48Q5BLP8 95 aa10.26□□□□□ -0.77
FOXN3-204ENST00000553840 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
FOXN3-204ENST00000553840 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
FOXN3-204ENST00000553840 RNF213Q63HN8 5207 aa10.25□□□□□ -0.77
FOXN3-204ENST00000553840 NDUFC2O95298 119 aa10.25□□□□□ -0.77
FOXN3-204ENST00000553840 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
FOXN3-204ENST00000553840 B5MCH6 92 aa10.23□□□□□ -0.77
FOXN3-204ENST00000553840 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
FOXN3-204ENST00000553840 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
FOXN3-204ENST00000553840 ADAMTSL4-AS1Q5T5F5 129 aa10.21□□□□□ -0.77
FOXN3-204ENST00000553840 IGLV7-46A0A075B6I9 117 aa10.2□□□□□ -0.78
FOXN3-204ENST00000553840 NPC2P61916 151 aa10.2□□□□□ -0.78
FOXN3-204ENST00000553840 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
FOXN3-204ENST00000553840 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
FOXN3-204ENST00000553840 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
FOXN3-204ENST00000553840 IGLV6-57P01721 117 aa10.19□□□□□ -0.78
FOXN3-204ENST00000553840 GAGE2AQ6NT46 116 aa10.19□□□□□ -0.78
FOXN3-204ENST00000553840 Q6ZRX8 168 aa10.19□□□□□ -0.78
FOXN3-204ENST00000553840 PCP2Q8IVA1 136 aa10.19□□□□□ -0.78
FOXN3-204ENST00000553840 CDIP1Q9H305 208 aa10.19□□□□□ -0.78
FOXN3-204ENST00000553840 TRAV23DV6A0A075B6W5 121 aa10.18□□□□□ -0.78
FOXN3-204ENST00000553840 TIMM17BO60830 172 aa10.18□□□□□ -0.78
FOXN3-204ENST00000553840 TPRXLQ17RH7 258 aa10.18□□□□□ -0.78
FOXN3-204ENST00000553840 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
FOXN3-204ENST00000553840 Q8NBF4 154 aa10.18□□□□□ -0.78
FOXN3-204ENST00000553840 LITAFQ99732 161 aa10.17□□□□□ -0.78
FOXN3-204ENST00000553840 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
FOXN3-204ENST00000553840 HINT1P49773 126 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-204ENST00000553840 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
FOXN3-204ENST00000553840 SPINK1P00995 79 aa10.15□□□□□ -0.78
FOXN3-204ENST00000553840 Q9BRP9 147 aa10.15□□□□□ -0.78
FOXN3-204ENST00000553840 ZNF73O43830 326 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-204ENST00000553840 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-204ENST00000553840 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
FOXN3-204ENST00000553840 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
FOXN3-204ENST00000553840 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
FOXN3-204ENST00000553840 IGLV9-49A0A0B4J1Y8 123 aa10.13□□□□□ -0.79
FOXN3-204ENST00000553840 SMIM6P0DI80 62 aa10.13□□□□□ -0.79
FOXN3-204ENST00000553840 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
FOXN3-204ENST00000553840 SSBP3-AS1Q7Z2R9 100 aa10.13□□□□□ -0.79
FOXN3-204ENST00000553840 OR13C6PQ8NH95 151 aa10.12□□□□□ -0.79
FOXN3-204ENST00000553840 MOBPQ13875 183 aa10.11□□□□□ -0.79
FOXN3-204ENST00000553840 SPANXDQ9BXN6 97 aa10.1□□□□□ -0.79
FOXN3-204ENST00000553840 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
FOXN3-204ENST00000553840 PAM16Q9Y3D7 125 aa10.08□□□□□ -0.8
FOXN3-204ENST00000553840 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
FOXN3-204ENST00000553840 SPATA45Q537H7 98 aa10.07□□□□□ -0.8
FOXN3-204ENST00000553840 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
FOXN3-204ENST00000553840 C12orf57Q99622 126 aa10.07□□□□□ -0.8
FOXN3-204ENST00000553840 VAMP8Q9BV40 100 aa10.07□□□□□ -0.8
FOXN3-204ENST00000553840 IFITM1P13164 125 aa10.06□□□□□ -0.8
FOXN3-204ENST00000553840 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
FOXN3-204ENST00000553840 Q6ZVH6 145 aa10.06□□□□□ -0.8
FOXN3-204ENST00000553840 COX8AP10176 69 aa10.05□□□□□ -0.8
FOXN3-204ENST00000553840 MUSTN1Q8IVN3 82 aa10.05□□□□□ -0.8
FOXN3-204ENST00000553840 C14orf144Q96I85 54 aa10.04□□□□□ -0.8
FOXN3-204ENST00000553840 DHRS4-AS1Q9P1J3 65 aa10.04□□□□□ -0.8
FOXN3-204ENST00000553840 PYY3Q5JQD4 70 aa10.03□□□□□ -0.8
FOXN3-204ENST00000553840 SLC25A34Q6PIV7 304 aa10.03□□□□□ -0.8
FOXN3-204ENST00000553840 ST20-AS1Q8NBB2 130 aa10.02□□□□□ -0.81
FOXN3-204ENST00000553840 SLC25A20O43772 301 aa10.01□□□□□ -0.81
FOXN3-204ENST00000553840 DLEU1O43261 78 aa10□□□□□ -0.81
FOXN3-204ENST00000553840 COX7BP24311 80 aa9.99□□□□□ -0.81
FOXN3-204ENST00000553840 KRTAP13-3Q3SY46 172 aa9.99□□□□□ -0.81
FOXN3-204ENST00000553840 Q8N377 158 aa9.99□□□□□ -0.81
FOXN3-204ENST00000553840 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
FOXN3-204ENST00000553840 C6orf99Q4VX62 202 aa9.98□□□□□ -0.81
FOXN3-204ENST00000553840 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
FOXN3-204ENST00000553840 SPRR1BP22528 89 aa9.97□□□□□ -0.81
FOXN3-204ENST00000553840 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
FOXN3-204ENST00000553840 A6NDN8 102 aa9.96□□□□□ -0.82
FOXN3-204ENST00000553840 TRBV7-6A0A0J9YX20 115 aa9.95□□□□□ -0.82
FOXN3-204ENST00000553840 MUC2Q02817 5179 aa9.94□□□□□ -0.82
FOXN3-204ENST00000553840 TAL2Q16559 108 aa9.94□□□□□ -0.82
FOXN3-204ENST00000553840 A4D1N5 150 aa9.93□□□□□ -0.82
FOXN3-204ENST00000553840 TRAV13-2A0A0B4J235 113 aa9.92□□□□□ -0.82
FOXN3-204ENST00000553840 A0A1B0GWB2 263 aa9.92□□□□□ -0.82
FOXN3-204ENST00000553840 TSTD3H0UI37 97 aa9.92□□□□□ -0.82
FOXN3-204ENST00000553840 LCE2BO14633 110 aa9.92□□□□□ -0.82
FOXN3-204ENST00000553840 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
FOXN3-204ENST00000553840 HIGD1BQ9P298 99 aa9.92□□□□□ -0.82
FOXN3-204ENST00000553840 DEFB105AQ8NG35 78 aa9.91□□□□□ -0.82
FOXN3-204ENST00000553840 TEX49A0A1B0GTD5 131 aa9.9□□□□□ -0.82
FOXN3-204ENST00000553840 SEC61BP60468 96 aaKnown RBP9.9□□□□□ -0.82
FOXN3-204ENST00000553840 C2orf91Q6ZV80 131 aa9.9□□□□□ -0.82
FOXN3-204ENST00000553840 PCP4L1A6NKN8 68 aa9.89□□□□□ -0.83
FOXN3-204ENST00000553840 ASB16-AS1Q495Z4 193 aa9.89□□□□□ -0.83
FOXN3-204ENST00000553840 Q1RN00 199 aa9.87□□□□□ -0.83
FOXN3-204ENST00000553840 HRCT1Q6UXD1 115 aa9.87□□□□□ -0.83
FOXN3-204ENST00000553840 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
FOXN3-204ENST00000553840 NHP2Q9NX24 153 aaKnown RBP9.87□□□□□ -0.83
FOXN3-204ENST00000553840 CD164Q04900 197 aa9.85□□□□□ -0.83
FOXN3-204ENST00000553840 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
FOXN3-204ENST00000553840 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
FOXN3-204ENST00000553840 CEND1Q8N111 149 aa9.83□□□□□ -0.84
FOXN3-204ENST00000553840 IGLV5-48A0A075B6I7 105 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms