RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 H3BMG7 143 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 M0R378 163 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 RTL8CO15255 209 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 SNCGO76070 127 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 COX6CP09669 75 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 CFC1BP0CG36 223 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 CFC1P0CG37 223 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 FXYD2P54710 66 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 NDUFV3P56181 108 aaKnown RBP3.22□□□□□ -1.89
VTI1B-202ENST00000553619 S100A7L2Q5SY68 101 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 NKAPP1Q8N9T2 125 aa3.22□□□□□ -1.89
VTI1B-202ENST00000553619 A0A1B0GWB2 263 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 C9JAW5 83 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 H3BUT2 72 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 SOSTDC1Q6X4U4 206 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 SDIM1Q6ZPB5 146 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 XAGE1AQ9HD64 81 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 TGP01266 2768 aa3.21□□□□□ -1.9
VTI1B-202ENST00000553619 IGLV5-37A0A075B6J1 123 aa3.2□□□□□ -1.9
VTI1B-202ENST00000553619 SCGB1C2P0DMR2 95 aa3.2□□□□□ -1.9
VTI1B-202ENST00000553619 PSMB2P49721 201 aa3.2□□□□□ -1.9
VTI1B-202ENST00000553619 Q1RN00 199 aa3.2□□□□□ -1.9
VTI1B-202ENST00000553619 C9orf129Q5T035 196 aaKnown RBP3.2□□□□□ -1.9
VTI1B-202ENST00000553619 PRR26Q8N8Z3 221 aa3.2□□□□□ -1.9
VTI1B-202ENST00000553619 PPDPFLQ8WWR9 84 aa3.2□□□□□ -1.9
VTI1B-202ENST00000553619 A0A096LNI7 61 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 IGKV2-24A0A0C4DH68 120 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 H0YGX0 51 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 VPREB1P12018 145 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 RPL13AP40429 203 aaKnown RBP3.19□□□□□ -1.9
VTI1B-202ENST00000553619 FAM19A5Q7Z5A7 132 aaPredicted RBP3.19□□□□□ -1.9
VTI1B-202ENST00000553619 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 C22orf24Q9Y442 160 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 DYNC2H1Q8NCM8 4307 aaKnown RBP3.19□□□□□ -1.9
VTI1B-202ENST00000553619 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
VTI1B-202ENST00000553619 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 H7C2G1 150 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 NCR3O14931 201 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 UQCRQO14949 82 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 RPL28P46779 137 aaKnown RBP3.18□□□□□ -1.9
VTI1B-202ENST00000553619 MRPL55Q7Z7F7 128 aaKnown RBP3.18□□□□□ -1.9
VTI1B-202ENST00000553619 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
VTI1B-202ENST00000553619 TRBV20-1A0A075B6N2 111 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 TRBV7-6A0A0J9YX20 115 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 IGLV6-57P01721 117 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 UBE2BP63146 152 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
VTI1B-202ENST00000553619 SPACA4Q8TDM5 124 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 LINC00167Q96N53 147 aa3.17□□□□□ -1.9
VTI1B-202ENST00000553619 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 TRAV23DV6A0A075B6W5 121 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 A0A087WYN8 130 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 A0A1W2PNN7 141 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 K7ERJ3 54 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 SLC25A20O43772 301 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 MT-ATP8P03928 68 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 INAFM2P0DMQ5 153 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 XGP55808 180 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 TMEM258P61165 79 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 ETDBQ3ZM63 59 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 LINC01620Q4KN68 170 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 SERTAD4-AS1Q5TG53 156 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 SMIM11BQ8TCY0 68 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 C7orf33Q8WU49 177 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 PLAC8Q9NZF1 115 aa3.16□□□□□ -1.9
VTI1B-202ENST00000553619 ETDCA0A1B0GVM5 59 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 EPM2AB3EWF7 344 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 H3BQ85 93 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 CCDC179H3BU77 68 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 ZNF73O43830 326 aaPredicted RBP3.15□□□□□ -1.91
VTI1B-202ENST00000553619 CHTF8P0CG12 524 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 COX7BP24311 80 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 ATXN8Q156A1 80 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 C9orf153Q5TBE3 101 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 TEN1Q86WV5 123 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 C3orf22Q8N5N4 141 aa3.15□□□□□ -1.91
VTI1B-202ENST00000553619 A0A1B0GVY2 172 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 DNAL4O96015 105 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 C6orf99Q4VX62 202 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 C1orf195Q5TG92 126 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 PHF5AQ7RTV0 110 aaKnown RBP3.14□□□□□ -1.91
VTI1B-202ENST00000553619 Q8NDZ9 215 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
VTI1B-202ENST00000553619 ALMS1Q8TCU4 4167 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 FAM240AA0A1B0GVK7 77 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 hADV29S1A0JD25 119 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 TRACP01848 142 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 ACYP1P07311 99 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms