RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 DEFB131BA0A096LNP1 70 aa1.64□□□□□ -2.15
TDP1-207ENST00000553617 DEFB103AP81534 67 aa1.64□□□□□ -2.15
TDP1-207ENST00000553617 SPINK13Q1W4C9 94 aa1.64□□□□□ -2.15
TDP1-207ENST00000553617 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
TDP1-207ENST00000553617 ANGP03950 147 aaKnown RBP1.63□□□□□ -2.15
TDP1-207ENST00000553617 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
TDP1-207ENST00000553617 CNOT1A5YKK6 2376 aaKnown RBP1.63□□□□□ -2.15
TDP1-207ENST00000553617 ZDBF2Q9HCK1 2354 aa1.63□□□□□ -2.15
TDP1-207ENST00000553617 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
TDP1-207ENST00000553617 SORL1Q92673 2214 aa1.62□□□□□ -2.15
TDP1-207ENST00000553617 LOC730098B7Z3J9 87 aa1.61□□□□□ -2.15
TDP1-207ENST00000553617 LINC00158P58513 81 aa1.61□□□□□ -2.15
TDP1-207ENST00000553617 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
TDP1-207ENST00000553617 LINC01590Q5TEZ4 76 aa1.61□□□□□ -2.15
TDP1-207ENST00000553617 LINC00575Q6W349 94 aa1.61□□□□□ -2.15
TDP1-207ENST00000553617 CACNA1EQ15878 2313 aa1.61□□□□□ -2.15
TDP1-207ENST00000553617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.61□□□□□ -2.152e-9■■■■■ 27.2
TDP1-207ENST00000553617 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
TDP1-207ENST00000553617 UBE2DNLQ8IWF7 75 aa1.6□□□□□ -2.15
TDP1-207ENST00000553617 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
TDP1-207ENST00000553617 CDKN2A-AS1Q9UH64 79 aa1.6□□□□□ -2.15
TDP1-207ENST00000553617 Q8IZM0 81 aa1.59□□□□□ -2.15
TDP1-207ENST00000553617 FLG2Q5D862 2391 aaPredicted RBP1.59□□□□□ -2.16
TDP1-207ENST00000553617 NAV3Q8IVL0 2385 aa1.58□□□□□ -2.16
TDP1-207ENST00000553617 PIEZO2Q9H5I5 2752 aa1.58□□□□□ -2.16
TDP1-207ENST00000553617 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
TDP1-207ENST00000553617 LINC00308Q8TCZ7 52 aa1.58□□□□□ -2.16
TDP1-207ENST00000553617 CCL22O00626 93 aa1.57□□□□□ -2.16
TDP1-207ENST00000553617 TFF3Q07654 80 aa1.57□□□□□ -2.16
TDP1-207ENST00000553617 SMIM2Q9BVW6 85 aa1.57□□□□□ -2.16
TDP1-207ENST00000553617 TTTY10Q9BZA0 68 aa1.57□□□□□ -2.16
TDP1-207ENST00000553617 DEFB106AQ8N104 65 aa1.56□□□□□ -2.16
TDP1-207ENST00000553617 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
TDP1-207ENST00000553617 PRO3102Q9H379 93 aa1.56□□□□□ -2.16
TDP1-207ENST00000553617 COL6A6A6NMZ7 2263 aa1.56□□□□□ -2.16
TDP1-207ENST00000553617 CACNA1BQ00975 2339 aa1.56□□□□□ -2.16
TDP1-207ENST00000553617 JMJD1CQ15652 2540 aa1.56□□□□□ -2.16
TDP1-207ENST00000553617 DOPEY2Q9Y3R5 2298 aa1.55□□□□□ -2.16
TDP1-207ENST00000553617 PRB3Q04118 309 aaPredicted RBP1.55□□□□□ -2.16
TDP1-207ENST00000553617 FBN1P35555 2871 aaKnown RBP1.54□□□□□ -2.16
TDP1-207ENST00000553617 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
TDP1-207ENST00000553617 FAM208BQ5VWN6 2430 aa1.54□□□□□ -2.16
TDP1-207ENST00000553617 NDUFA1O15239 70 aa1.54□□□□□ -2.16
TDP1-207ENST00000553617 USMG5Q96IX5 58 aa1.54□□□□□ -2.16
TDP1-207ENST00000553617 K7EQZ3 153 aa1.53□□□□□ -2.16
TDP1-207ENST00000553617 OTOGLQ3ZCN5 2332 aa1.53□□□□□ -2.16
TDP1-207ENST00000553617 PDE4DIPQ5VU43 2346 aa1.53□□□□□ -2.16
TDP1-207ENST00000553617 COX6B2Q6YFQ2 88 aa1.53□□□□□ -2.16
TDP1-207ENST00000553617 TP53AIP1Q9HCN2 124 aa1.53□□□□□ -2.16
TDP1-207ENST00000553617 TRIOBPQ9H2D6 2365 aa1.52□□□□□ -2.17
TDP1-207ENST00000553617 LYNX1G3V0Z9 82 aa1.52□□□□□ -2.17
TDP1-207ENST00000553617 IAPPP10997 89 aa1.52□□□□□ -2.17
TDP1-207ENST00000553617 MRPL34Q9BQ48 92 aaKnown RBP1.52□□□□□ -2.17
TDP1-207ENST00000553617 I3L2K1 104 aa1.51□□□□□ -2.17
TDP1-207ENST00000553617 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
TDP1-207ENST00000553617 RPS27P42677 84 aaKnown RBP1.51□□□□□ -2.17
TDP1-207ENST00000553617 PIGYQ3MUY2 71 aa1.51□□□□□ -2.17
TDP1-207ENST00000553617 MINOS1Q5TGZ0 78 aa1.51□□□□□ -2.17
TDP1-207ENST00000553617 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
TDP1-207ENST00000553617 H3BSH0 61 aa1.5□□□□□ -2.17
TDP1-207ENST00000553617 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
TDP1-207ENST00000553617 DEFB123Q8N688 67 aa1.5□□□□□ -2.17
TDP1-207ENST00000553617 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
TDP1-207ENST00000553617 J3QKU1 62 aa1.49□□□□□ -2.17
TDP1-207ENST00000553617 PLCE1Q9P212 2302 aa1.49□□□□□ -2.17
TDP1-207ENST00000553617 PTPRQQ9UMZ3 2332 aa1.49□□□□□ -2.17
TDP1-207ENST00000553617 H0YAA0 97 aa1.48□□□□□ -2.17
TDP1-207ENST00000553617 C6orf48Q9UBA6 75 aa1.48□□□□□ -2.17
TDP1-207ENST00000553617 KNL1Q8NG31 2342 aa1.48□□□□□ -2.17
TDP1-207ENST00000553617 COX6A2Q02221 97 aa1.47□□□□□ -2.17
TDP1-207ENST00000553617 ASH1LQ9NR48 2969 aaKnown RBP1.47□□□□□ -2.17
TDP1-207ENST00000553617 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
TDP1-207ENST00000553617 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
TDP1-207ENST00000553617 REV3LO60673 3130 aa1.46□□□□□ -2.18
TDP1-207ENST00000553617 CNTRLQ7Z7A1 2325 aa1.45□□□□□ -2.18
TDP1-207ENST00000553617 K7EIL1 84 aa1.45□□□□□ -2.18
TDP1-207ENST00000553617 PTPRZ1P23471 2315 aaPredicted RBP1.45□□□□□ -2.18
TDP1-207ENST00000553617 WNK2Q9Y3S1 2297 aa1.45□□□□□ -2.18
TDP1-207ENST00000553617 LELP1Q5T871 98 aa1.44□□□□□ -2.18
TDP1-207ENST00000553617 Q6ZSA8 131 aa1.43□□□□□ -2.18
TDP1-207ENST00000553617 PRO0255Q9UI72 69 aa1.43□□□□□ -2.18
TDP1-207ENST00000553617 PKDREJQ9NTG1 2253 aa1.42□□□□□ -2.18
TDP1-207ENST00000553617 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
TDP1-207ENST00000553617 PRCDQ00LT1 54 aa1.42□□□□□ -2.18
TDP1-207ENST00000553617 SPINK9Q5DT21 86 aa1.42□□□□□ -2.18
TDP1-207ENST00000553617 WFDC10BQ8IUB3 73 aa1.42□□□□□ -2.18
TDP1-207ENST00000553617 WFDC13Q8IUB5 93 aa1.42□□□□□ -2.18
TDP1-207ENST00000553617 DSPP15924 2871 aaKnown RBP1.42□□□□□ -2.18
TDP1-207ENST00000553617 IGF2RP11717 2491 aa1.42□□□□□ -2.18
TDP1-207ENST00000553617 ZNF462Q96JM2 2506 aa1.41□□□□□ -2.18
TDP1-207ENST00000553617 DEFB130BP0DP73 79 aa1.41□□□□□ -2.18
TDP1-207ENST00000553617 DEFB130AP0DP74 79 aa1.41□□□□□ -2.18
TDP1-207ENST00000553617 POLR2KP53803 58 aaKnown RBP1.41□□□□□ -2.18
TDP1-207ENST00000553617 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
TDP1-207ENST00000553617 APLNQ9ULZ1 77 aa1.41□□□□□ -2.18
TDP1-207ENST00000553617 USF3Q68DE3 2245 aa1.41□□□□□ -2.18
TDP1-207ENST00000553617 TPRP12270 2363 aaKnown RBP1.4□□□□□ -2.19
TDP1-207ENST00000553617 C2CD3Q4AC94 2353 aa1.4□□□□□ -2.19
TDP1-207ENST00000553617 TRANK1O15050 2925 aa1.39□□□□□ -2.19
TDP1-207ENST00000553617 ROS1P08922 2347 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms