RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 S100A2P29034 98 aa3.99□□□□□ -1.77
ATXN3-219ENST00000553488 RPS29P62273 56 aaKnown RBP3.99□□□□□ -1.77
ATXN3-219ENST00000553488 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
ATXN3-219ENST00000553488 SND1-IT1Q9HBX3 110 aa3.99□□□□□ -1.77
ATXN3-219ENST00000553488 IGLV9-49A0A0B4J1Y8 123 aa3.98□□□□□ -1.77
ATXN3-219ENST00000553488 ATP5LO75964 103 aa3.98□□□□□ -1.77
ATXN3-219ENST00000553488 PFN2P35080 140 aa3.98□□□□□ -1.77
ATXN3-219ENST00000553488 LINC00483Q53H64 154 aa3.98□□□□□ -1.77
ATXN3-219ENST00000553488 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
ATXN3-219ENST00000553488 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
ATXN3-219ENST00000553488 ZNF706Q9Y5V0 76 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-219ENST00000553488 NDUFA12Q9UI09 145 aa3.97□□□□□ -1.77
ATXN3-219ENST00000553488 ERG28Q9UKR5 140 aa3.97□□□□□ -1.77
ATXN3-219ENST00000553488 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-219ENST00000553488 SPRR1AP35321 89 aa3.96□□□□□ -1.78
ATXN3-219ENST00000553488 Q6ZVQ6 151 aa3.96□□□□□ -1.78
ATXN3-219ENST00000553488 KRTAP4-16G5E9R7 235 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-219ENST00000553488 TSTD3H0UI37 97 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 COX17Q14061 63 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 PCOTHQ58A44 107 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 SMCR5Q8TEV8 140 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 YPEL4Q96NS1 127 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 SCGB3A1Q96QR1 104 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 CST9LQ9H4G1 147 aa3.95□□□□□ -1.78
ATXN3-219ENST00000553488 LINC01546A6NGU7 62 aa3.94□□□□□ -1.78
ATXN3-219ENST00000553488 SLC25A20O43772 301 aa3.94□□□□□ -1.78
ATXN3-219ENST00000553488 IGLC3P0DOY3 106 aa3.94□□□□□ -1.78
ATXN3-219ENST00000553488 G0S2P27469 103 aa3.94□□□□□ -1.78
ATXN3-219ENST00000553488 NDUFA6P56556 154 aa3.94□□□□□ -1.78
ATXN3-219ENST00000553488 MOBPQ13875 183 aa3.94□□□□□ -1.78
ATXN3-219ENST00000553488 IGLV8-61A0A075B6I0 122 aa3.93□□□□□ -1.78
ATXN3-219ENST00000553488 H3BRM9 83 aa3.93□□□□□ -1.78
ATXN3-219ENST00000553488 ZNF22P17026 224 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-219ENST00000553488 PMVKQ15126 192 aa3.93□□□□□ -1.78
ATXN3-219ENST00000553488 PYY3Q5JQD4 70 aa3.93□□□□□ -1.78
ATXN3-219ENST00000553488 HIST3H2BBQ8N257 126 aa3.93□□□□□ -1.78
ATXN3-219ENST00000553488 ZNF625Q96I27 306 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-219ENST00000553488 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
ATXN3-219ENST00000553488 KCNQ1DNQ9H478 68 aa3.92□□□□□ -1.78
ATXN3-219ENST00000553488 LINC01549A6NIU2 74 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BKO60814 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 ERC2-IT1O76042 136 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BJP06899 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BOP23527 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 DDTP30046 118 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BBP33778 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BDP58876 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BCP62807 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 KIAA1644Q3SXP7 199 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
ATXN3-219ENST00000553488 NCR3O14931 201 aa3.9□□□□□ -1.79
ATXN3-219ENST00000553488 TRGC2P03986 189 aa3.9□□□□□ -1.79
ATXN3-219ENST00000553488 FABP4P15090 132 aa3.9□□□□□ -1.79
ATXN3-219ENST00000553488 JOSD1Q15040 202 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-219ENST00000553488 C14orf144Q96I85 54 aa3.9□□□□□ -1.79
ATXN3-219ENST00000553488 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
ATXN3-219ENST00000553488 A0A096LNJ9 63 aa3.89□□□□□ -1.79
ATXN3-219ENST00000553488 TRBV10-3A0A0K0K1G6 114 aa3.89□□□□□ -1.79
ATXN3-219ENST00000553488 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
ATXN3-219ENST00000553488 M0R2T5 61 aa3.89□□□□□ -1.79
ATXN3-219ENST00000553488 COA6Q5JTJ3 125 aaKnown RBP3.89□□□□□ -1.79
ATXN3-219ENST00000553488 SFTA2Q6UW10 78 aa3.89□□□□□ -1.79
ATXN3-219ENST00000553488 Q9BRP9 147 aa3.89□□□□□ -1.79
ATXN3-219ENST00000553488 A0A1B0GV90 55 aa3.88□□□□□ -1.79
ATXN3-219ENST00000553488 C11orf86A6NJI1 115 aa3.88□□□□□ -1.79
ATXN3-219ENST00000553488 LINC00158P58513 81 aa3.88□□□□□ -1.79
ATXN3-219ENST00000553488 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
ATXN3-219ENST00000553488 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
ATXN3-219ENST00000553488 C9orf92A6NGG3 77 aa3.87□□□□□ -1.79
ATXN3-219ENST00000553488 HSBP1L1C9JCN9 74 aa3.87□□□□□ -1.79
ATXN3-219ENST00000553488 BOD1L2Q8IYS8 172 aa3.87□□□□□ -1.79
ATXN3-219ENST00000553488 SMIM13P0DJ93 91 aa3.86□□□□□ -1.79
ATXN3-219ENST00000553488 C9orf153Q5TBE3 101 aa3.86□□□□□ -1.79
ATXN3-219ENST00000553488 Q6ZRX8 168 aa3.86□□□□□ -1.79
ATXN3-219ENST00000553488 PRO1933Q9H354 126 aa3.86□□□□□ -1.79
ATXN3-219ENST00000553488 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
ATXN3-219ENST00000553488 TRAV9-1A0A075B6T8 112 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 M0R143 59 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 CFC1P0CG37 223 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 TMEM170BQ5T4T1 132 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 COX6B2Q6YFQ2 88 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 FA2HQ7L5A8 372 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 MIR7-3HGQ8N6C7 128 aa3.85□□□□□ -1.79
ATXN3-219ENST00000553488 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
ATXN3-219ENST00000553488 LIMD2Q9BT23 127 aa3.84□□□□□ -1.79
ATXN3-219ENST00000553488 IGLV6-57P01721 117 aa3.83□□□□□ -1.8
ATXN3-219ENST00000553488 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
ATXN3-219ENST00000553488 ST20-AS1Q8NBB2 130 aa3.83□□□□□ -1.8
ATXN3-219ENST00000553488 CBY1Q9Y3M2 126 aa3.83□□□□□ -1.8
ATXN3-219ENST00000553488 LOC107984156A0A0G2JMH3 177 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 TRBV10-2A0A0K0K1G8 114 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 HBDP02042 147 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 LINC00614P0C842 121 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 COX19Q49B96 90 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms