RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RMI2Q96E14 147 aa8.5□□□□□ -1.05
SHMT2-205ENST00000553474 COL7A1Q02388 2944 aa8.5□□□□□ -1.05
SHMT2-205ENST00000553474 IGKV3D-7A0A0C4DH55 119 aa8.5□□□□□ -1.05
SHMT2-205ENST00000553474 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
SHMT2-205ENST00000553474 Q6ZRP5 223 aa8.49□□□□□ -1.05
SHMT2-205ENST00000553474 LINC00528Q8N1L1 170 aa8.49□□□□□ -1.05
SHMT2-205ENST00000553474 V9GYY9 64 aa8.49□□□□□ -1.05
SHMT2-205ENST00000553474 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
SHMT2-205ENST00000553474 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
SHMT2-205ENST00000553474 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
SHMT2-205ENST00000553474 TGP01266 2768 aa8.46□□□□□ -1.05
SHMT2-205ENST00000553474 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.05
SHMT2-205ENST00000553474 NKAPP1Q8N9T2 125 aa8.46□□□□□ -1.05
SHMT2-205ENST00000553474 UPK3BQ9BT76 320 aa8.46□□□□□ -1.05
SHMT2-205ENST00000553474 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 CRYGAP11844 174 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 DNAH9Q9NYC9 4486 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 IGLV5-37A0A075B6J1 123 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 BCE1O60756 84 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
SHMT2-205ENST00000553474 HUWE1Q7Z6Z7 4374 aaKnown RBP8.44□□□□□ -1.06
SHMT2-205ENST00000553474 CXCL6P80162 114 aa8.43□□□□□ -1.06
SHMT2-205ENST00000553474 A0A087WVE0 104 aa8.41□□□□□ -1.06
SHMT2-205ENST00000553474 LOC107984640A0A0U1RRK4 108 aa8.41□□□□□ -1.06
SHMT2-205ENST00000553474 Q6ZVQ6 151 aa8.41□□□□□ -1.06
SHMT2-205ENST00000553474 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
SHMT2-205ENST00000553474 PRYO14603 147 aa8.4□□□□□ -1.06
SHMT2-205ENST00000553474 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.07
SHMT2-205ENST00000553474 C7orf33Q8WU49 177 aa8.4□□□□□ -1.07
SHMT2-205ENST00000553474 A0A1B0GW54 56 aa8.39□□□□□ -1.07
SHMT2-205ENST00000553474 SERTAD4-AS1Q5TG53 156 aa8.38□□□□□ -1.07
SHMT2-205ENST00000553474 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
SHMT2-205ENST00000553474 SPRR1AP35321 89 aa8.38□□□□□ -1.07
SHMT2-205ENST00000553474 Q6ZRX8 168 aa8.37□□□□□ -1.07
SHMT2-205ENST00000553474 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
SHMT2-205ENST00000553474 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
SHMT2-205ENST00000553474 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-205ENST00000553474 M0R2N4 97 aa8.35□□□□□ -1.07
SHMT2-205ENST00000553474 HAMPP81172 84 aa8.35□□□□□ -1.07
SHMT2-205ENST00000553474 IGLV5-48A0A075B6I7 105 aa8.35□□□□□ -1.07
SHMT2-205ENST00000553474 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
SHMT2-205ENST00000553474 MRPL55Q7Z7F7 128 aaKnown RBP8.33□□□□□ -1.08
SHMT2-205ENST00000553474 TMEM258P61165 79 aa8.32□□□□□ -1.08
SHMT2-205ENST00000553474 Q8N377 158 aa8.32□□□□□ -1.08
SHMT2-205ENST00000553474 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
SHMT2-205ENST00000553474 TRAV7A0A075B6U4 112 aa8.3□□□□□ -1.08
SHMT2-205ENST00000553474 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
SHMT2-205ENST00000553474 HRCT1Q6UXD1 115 aa8.3□□□□□ -1.08
SHMT2-205ENST00000553474 WWC2-AS2Q96NR7 200 aa8.3□□□□□ -1.08
SHMT2-205ENST00000553474 FUSP35637 526 aaKnown RBP eCLIP8.29□□□□□ -1.08
SHMT2-205ENST00000553474 C4orf26Q17RF5 130 aa8.29□□□□□ -1.08
SHMT2-205ENST00000553474 Q9BRP9 147 aa8.29□□□□□ -1.08
SHMT2-205ENST00000553474 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
SHMT2-205ENST00000553474 Q5XG85 94 aa8.28□□□□□ -1.08
SHMT2-205ENST00000553474 FAM168BA1KXE4 195 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 RPL37AP8A6NKH3 93 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 NREPQ16612 68 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 C1orf195Q5TG92 126 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 PKIGQ9Y2B9 76 aa8.27□□□□□ -1.08
SHMT2-205ENST00000553474 C16orf90A8MZG2 172 aa8.27□□□□□ -1.09
SHMT2-205ENST00000553474 TNP2Q05952 138 aa8.27□□□□□ -1.09
SHMT2-205ENST00000553474 REG3GQ6UW15 175 aa8.26□□□□□ -1.09
SHMT2-205ENST00000553474 NUPR2A6NF83 97 aa8.25□□□□□ -1.09
SHMT2-205ENST00000553474 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
SHMT2-205ENST00000553474 PSCAO43653 123 aa8.23□□□□□ -1.09
SHMT2-205ENST00000553474 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
SHMT2-205ENST00000553474 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 DNAH7Q8WXX0 4024 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 BPY2O14599 106 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 UBE2BP63146 152 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 Q8NBF4 154 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 CSMD3Q7Z407 3707 aa8.22□□□□□ -1.09
SHMT2-205ENST00000553474 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
SHMT2-205ENST00000553474 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
SHMT2-205ENST00000553474 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
SHMT2-205ENST00000553474 C20orf197Q8N268 126 aa8.2□□□□□ -1.1
SHMT2-205ENST00000553474 A0A096LNI7 61 aa8.19□□□□□ -1.1
SHMT2-205ENST00000553474 IGKV4-1P06312 121 aa8.19□□□□□ -1.1
SHMT2-205ENST00000553474 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
SHMT2-205ENST00000553474 DYNC2H1Q8NCM8 4307 aaKnown RBP8.18□□□□□ -1.1
SHMT2-205ENST00000553474 A0A1W2PNM2 257 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 F8WEM9 126 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 C3orf84H3BNL1 204 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 NDUFC1O43677 76 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 STARD9Q9P2P6 4700 aa8.18□□□□□ -1.1
SHMT2-205ENST00000553474 H0Y9J4 135 aa8.17□□□□□ -1.1
SHMT2-205ENST00000553474 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
SHMT2-205ENST00000553474 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
SHMT2-205ENST00000553474 IGLV8-61A0A075B6I0 122 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms