RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 IGKV2D-28P01615 120 aa6.07□□□□□ -1.44
TMEM260-204ENST00000553335 SMR3BP02814 79 aaPredicted RBP6.07□□□□□ -1.44
TMEM260-204ENST00000553335 CTAG1AP78358 180 aa6.07□□□□□ -1.44
TMEM260-204ENST00000553335 RAB37Q96AX2 223 aa6.07□□□□□ -1.44
TMEM260-204ENST00000553335 TRBV10-3A0A0K0K1G6 114 aa6.06□□□□□ -1.44
TMEM260-204ENST00000553335 M0R143 59 aa6.06□□□□□ -1.44
TMEM260-204ENST00000553335 FXYD2P54710 66 aa6.06□□□□□ -1.44
TMEM260-204ENST00000553335 PRYO14603 147 aa6.05□□□□□ -1.44
TMEM260-204ENST00000553335 IGLV6-57P01721 117 aa6.05□□□□□ -1.44
TMEM260-204ENST00000553335 LINC00337Q8N6G1 96 aa6.05□□□□□ -1.44
TMEM260-204ENST00000553335 RYR1P21817 5038 aa6.05□□□□□ -1.44
TMEM260-204ENST00000553335 TRAV23DV6A0A075B6W5 121 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 CFC1BP0CG36 223 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 CFC1P0CG37 223 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
TMEM260-204ENST00000553335 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
TMEM260-204ENST00000553335 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 BVES-AS1Q5T3Y7 98 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 NHP2Q9NX24 153 aaKnown RBP6.04□□□□□ -1.44
TMEM260-204ENST00000553335 PSORS1C2Q9UIG4 136 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 PCLOQ9Y6V0 5065 aa6.04□□□□□ -1.44
TMEM260-204ENST00000553335 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
TMEM260-204ENST00000553335 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
TMEM260-204ENST00000553335 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
TMEM260-204ENST00000553335 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
TMEM260-204ENST00000553335 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
TMEM260-204ENST00000553335 ZNF73O43830 326 aaPredicted RBP6.01□□□□□ -1.45
TMEM260-204ENST00000553335 BCE1O60756 84 aa6.01□□□□□ -1.45
TMEM260-204ENST00000553335 Q8N1X5 172 aa6.01□□□□□ -1.45
TMEM260-204ENST00000553335 A0A1B0GWB2 263 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 SPRR1AP35321 89 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 BATFQ16520 125 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 Q1RN00 199 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 Q5VSD8 79 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 FAM19A1Q7Z5A9 133 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 DIRC1Q969H9 104 aa6□□□□□ -1.45
TMEM260-204ENST00000553335 HSPG2P98160 4391 aa5.99□□□□□ -1.45
TMEM260-204ENST00000553335 H7C2G1 150 aa5.99□□□□□ -1.45
TMEM260-204ENST00000553335 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
TMEM260-204ENST00000553335 UBE2AP49459 152 aa5.99□□□□□ -1.45
TMEM260-204ENST00000553335 C6orf99Q4VX62 202 aa5.99□□□□□ -1.45
TMEM260-204ENST00000553335 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
TMEM260-204ENST00000553335 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
TMEM260-204ENST00000553335 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
TMEM260-204ENST00000553335 VAMP3Q15836 100 aa5.98□□□□□ -1.45
TMEM260-204ENST00000553335 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
TMEM260-204ENST00000553335 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
TMEM260-204ENST00000553335 H0Y9J4 135 aa5.97□□□□□ -1.45
TMEM260-204ENST00000553335 K7ERJ3 54 aa5.97□□□□□ -1.45
TMEM260-204ENST00000553335 ZNF861PO60384 105 aa5.97□□□□□ -1.45
TMEM260-204ENST00000553335 COX7BP24311 80 aa5.97□□□□□ -1.45
TMEM260-204ENST00000553335 PRLHP81277 87 aa5.96□□□□□ -1.46
TMEM260-204ENST00000553335 Q6ZRX8 168 aa5.96□□□□□ -1.46
TMEM260-204ENST00000553335 FAT1Q14517 4588 aa5.96□□□□□ -1.46
TMEM260-204ENST00000553335 TSPAN13O95857 204 aa5.95□□□□□ -1.46
TMEM260-204ENST00000553335 PSMB2P49721 201 aa5.95□□□□□ -1.46
TMEM260-204ENST00000553335 ELOF1P60002 83 aaKnown RBP5.95□□□□□ -1.46
TMEM260-204ENST00000553335 H0YGX0 51 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 COX6CP09669 75 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 INAFM2P0DMQ5 153 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
TMEM260-204ENST00000553335 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 HIGD2AQ9BW72 106 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 SNHG12Q9BXW3 62 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 VPS13BQ7Z7G8 4022 aa5.94□□□□□ -1.46
TMEM260-204ENST00000553335 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
TMEM260-204ENST00000553335 SLC25A20O43772 301 aa5.93□□□□□ -1.46
TMEM260-204ENST00000553335 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
TMEM260-204ENST00000553335 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
TMEM260-204ENST00000553335 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
TMEM260-204ENST00000553335 SNCGO76070 127 aa5.92□□□□□ -1.46
TMEM260-204ENST00000553335 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
TMEM260-204ENST00000553335 SCGB1C2P0DMR2 95 aa5.91□□□□□ -1.46
TMEM260-204ENST00000553335 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
TMEM260-204ENST00000553335 Q9BRP9 147 aa5.91□□□□□ -1.46
TMEM260-204ENST00000553335 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.46
TMEM260-204ENST00000553335 LINC00575Q6W349 94 aa5.9□□□□□ -1.46
TMEM260-204ENST00000553335 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
TMEM260-204ENST00000553335 A0A1B0GX51 115 aa5.89□□□□□ -1.47
TMEM260-204ENST00000553335 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
TMEM260-204ENST00000553335 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
TMEM260-204ENST00000553335 H3BUT2 72 aa5.88□□□□□ -1.47
TMEM260-204ENST00000553335 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
TMEM260-204ENST00000553335 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
TMEM260-204ENST00000553335 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
TMEM260-204ENST00000553335 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
TMEM260-204ENST00000553335 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
TMEM260-204ENST00000553335 DNAL4O96015 105 aa5.85□□□□□ -1.47
TMEM260-204ENST00000553335 OCIAD2Q56VL3 154 aa5.85□□□□□ -1.47
TMEM260-204ENST00000553335 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
TMEM260-204ENST00000553335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
TMEM260-204ENST00000553335 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
TMEM260-204ENST00000553335 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
TMEM260-204ENST00000553335 A0A1W2PPM0 123 aa5.84□□□□□ -1.47
TMEM260-204ENST00000553335 LST1O00453 97 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms