RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 UQCR10Q9UDW1 63 aa4.71□□□□□ -1.66
NPAS3-213ENST00000552874 PLA2G1BP04054 148 aaKnown RBP4.7□□□□□ -1.66
NPAS3-213ENST00000552874 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
NPAS3-213ENST00000552874 MRPL55Q7Z7F7 128 aaKnown RBP4.7□□□□□ -1.66
NPAS3-213ENST00000552874 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
NPAS3-213ENST00000552874 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
NPAS3-213ENST00000552874 VAMP8Q9BV40 100 aa4.7□□□□□ -1.66
NPAS3-213ENST00000552874 SPANXDQ9BXN6 97 aa4.7□□□□□ -1.66
NPAS3-213ENST00000552874 PPDPFQ9H3Y8 114 aa4.7□□□□□ -1.66
NPAS3-213ENST00000552874 SPANXCQ9NY87 97 aa4.7□□□□□ -1.66
NPAS3-213ENST00000552874 IGLV1-50A0A075B6I6 118 aa4.69□□□□□ -1.66
NPAS3-213ENST00000552874 BOD1L2Q8IYS8 172 aa4.69□□□□□ -1.66
NPAS3-213ENST00000552874 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
NPAS3-213ENST00000552874 IGKV2-28A0A075B6P5 120 aa4.68□□□□□ -1.66
NPAS3-213ENST00000552874 A0A1B0GV72 72 aa4.68□□□□□ -1.66
NPAS3-213ENST00000552874 IGKV2D-28P01615 120 aa4.68□□□□□ -1.66
NPAS3-213ENST00000552874 COX8AP10176 69 aa4.68□□□□□ -1.66
NPAS3-213ENST00000552874 DPH3Q96FX2 82 aa4.68□□□□□ -1.66
NPAS3-213ENST00000552874 GAGE10A6NGK3 116 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 KRTAP4-16G5E9R7 235 aaPredicted RBP4.67□□□□□ -1.66
NPAS3-213ENST00000552874 M0R378 163 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 NCR3O14931 201 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 NDUFC2O95298 119 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 INAFM2P0DMQ5 153 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 SPRR1AP35321 89 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 BATFQ16520 125 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 C2orf91Q6ZV80 131 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 NKAPP1Q8N9T2 125 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
NPAS3-213ENST00000552874 SPANXB1Q9NS25 103 aaPredicted RBP4.67□□□□□ -1.66
NPAS3-213ENST00000552874 TRBV10-2A0A0K0K1G8 114 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 IGLV6-57P01721 117 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 IGLV7-43P04211 117 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 NPC2P61916 151 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 RPL24P83731 157 aaKnown RBP4.66□□□□□ -1.66
NPAS3-213ENST00000552874 SPATA45Q537H7 98 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 PAM16Q9Y3D7 125 aa4.66□□□□□ -1.66
NPAS3-213ENST00000552874 TRBV10-3A0A0K0K1G6 114 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 BCE1O60756 84 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 MT1HL1P0DM35 61 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 UBE2BP63146 152 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 C1orf137Q5JT78 98 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 TMEM126AQ9H061 195 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 KCNQ1DNQ9H478 68 aa4.65□□□□□ -1.67
NPAS3-213ENST00000552874 PRYO14603 147 aa4.64□□□□□ -1.67
NPAS3-213ENST00000552874 TAX1BP3O14907 124 aa4.64□□□□□ -1.67
NPAS3-213ENST00000552874 SCGB1D4Q6XE38 83 aa4.64□□□□□ -1.67
NPAS3-213ENST00000552874 Q6ZVH6 145 aa4.64□□□□□ -1.67
NPAS3-213ENST00000552874 KRTAP29-1A8MX34 341 aaPredicted RBP4.63□□□□□ -1.67
NPAS3-213ENST00000552874 H0Y9J4 135 aa4.63□□□□□ -1.67
NPAS3-213ENST00000552874 IFITM1P13164 125 aa4.63□□□□□ -1.67
NPAS3-213ENST00000552874 VAMP3Q15836 100 aa4.63□□□□□ -1.67
NPAS3-213ENST00000552874 SPINK6Q6UWN8 80 aa4.63□□□□□ -1.67
NPAS3-213ENST00000552874 MTURNQ8N3F0 131 aa4.63□□□□□ -1.67
NPAS3-213ENST00000552874 HIGD1BQ9P298 99 aa4.63□□□□□ -1.67
NPAS3-213ENST00000552874 REG3GQ6UW15 175 aa4.62□□□□□ -1.67
NPAS3-213ENST00000552874 MUSTN1Q8IVN3 82 aa4.62□□□□□ -1.67
NPAS3-213ENST00000552874 ZNF861PO60384 105 aa4.61□□□□□ -1.67
NPAS3-213ENST00000552874 TSPAN13O95857 204 aa4.61□□□□□ -1.67
NPAS3-213ENST00000552874 HINT1P49773 126 aaPredicted RBP4.61□□□□□ -1.67
NPAS3-213ENST00000552874 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
NPAS3-213ENST00000552874 SLC25A34Q6PIV7 304 aa4.61□□□□□ -1.67
NPAS3-213ENST00000552874 PRLHP81277 87 aa4.6□□□□□ -1.67
NPAS3-213ENST00000552874 SMCR5Q8TEV8 140 aa4.6□□□□□ -1.67
NPAS3-213ENST00000552874 Q9BRP9 147 aa4.6□□□□□ -1.67
NPAS3-213ENST00000552874 LRP2P98164 4655 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 TRAV23DV6A0A075B6W5 121 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 A4D1N5 150 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 B5MCH6 92 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 OXTP01178 125 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 BVES-AS1Q5T3Y7 98 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 DIRC1Q969H9 104 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 LINC01600Q96MT4 127 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
NPAS3-213ENST00000552874 RPL28P46779 137 aaKnown RBP4.58□□□□□ -1.68
NPAS3-213ENST00000552874 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
NPAS3-213ENST00000552874 Q6ZRX8 168 aa4.58□□□□□ -1.68
NPAS3-213ENST00000552874 GTF2H5Q6ZYL4 71 aa4.58□□□□□ -1.68
NPAS3-213ENST00000552874 FAM19A1Q7Z5A9 133 aa4.58□□□□□ -1.68
NPAS3-213ENST00000552874 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
NPAS3-213ENST00000552874 K7EP34 96 aa4.57□□□□□ -1.68
NPAS3-213ENST00000552874 ZNF73O43830 326 aaPredicted RBP4.57□□□□□ -1.68
NPAS3-213ENST00000552874 FXYD2P54710 66 aa4.57□□□□□ -1.68
NPAS3-213ENST00000552874 COPS9Q8WXC6 57 aa4.57□□□□□ -1.68
NPAS3-213ENST00000552874 A0A087X002 238 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 ERC2-IT1O76042 136 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 UBE2AP49459 152 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 ELOF1P60002 83 aaKnown RBP4.56□□□□□ -1.68
NPAS3-213ENST00000552874 HSD52Q0P140 79 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 TAL2Q16559 108 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 HIST1H4GQ99525 98 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 LPAP08519 4548 aa4.56□□□□□ -1.68
NPAS3-213ENST00000552874 A0A0B4J2C4 111 aa4.55□□□□□ -1.68
NPAS3-213ENST00000552874 CFC1BP0CG36 223 aa4.55□□□□□ -1.68
NPAS3-213ENST00000552874 CFC1P0CG37 223 aa4.55□□□□□ -1.68
NPAS3-213ENST00000552874 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
NPAS3-213ENST00000552874 S100A7L2Q5SY68 101 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms