RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RBM12B-AS1Q9P1G2 102 aa1.19□□□□□ -2.22
CPSF6-207ENST00000551516 FXYD6-FXYD2A0A087WZ82 144 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 A0A1B0GUT8 65 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 A0A1B0GV50 99 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 LINC00862A6NCI5 91 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 HIGD1CA8MV81 97 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 PDE6DO43924 150 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 ERC2-IT1O76042 136 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 SRP19P09132 144 aaKnown RBP1.18□□□□□ -2.22
CPSF6-207ENST00000551516 SMIM17P0DL12 118 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 GNG4P50150 75 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 Q8IZM0 81 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 SMCR5Q8TEV8 140 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 SMIM2Q9BVW6 85 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 ST20Q9HBF5 79 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 MANBALQ9NQG1 85 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 OSTCQ9NRP0 149 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 SPANXA1Q9NS26 97 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 GNG13Q9P2W3 67 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 CDKN2A-AS1Q9UH64 79 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 PKIGQ9Y2B9 76 aa1.18□□□□□ -2.22
CPSF6-207ENST00000551516 TMEM238C9JI98 176 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 H3BQ85 93 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 UBE2L6O14933 153 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 ADCYAP1P18509 176 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 S100A2P29034 98 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 RPL28P46779 137 aaKnown RBP1.17□□□□□ -2.22
CPSF6-207ENST00000551516 PCOTHQ58A44 107 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 AMMECR1LQ6DCA0 310 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 SPAG11AQ6PDA7 123 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 ZNF625Q96I27 306 aaPredicted RBP1.17□□□□□ -2.22
CPSF6-207ENST00000551516 EIF5A2Q9GZV4 153 aaKnown RBP1.17□□□□□ -2.22
CPSF6-207ENST00000551516 TMEM126AQ9H061 195 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 MED9Q9NWA0 146 aa1.17□□□□□ -2.22
CPSF6-207ENST00000551516 A0A0B4J2C4 111 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 LOC107984156A0A0G2JMH3 177 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 D6R8Y8 96 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 F8VRH5 84 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 SPINK1P00995 79 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 IGLV6-57P01721 117 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 HBBP68871 147 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 PRLHP81277 87 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 PDZD11Q5EBL8 140 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 Q5XG85 94 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 ARL17AQ8IVW1 177 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 TCTE3Q8IZS6 198 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 DAND5Q8N907 189 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.16□□□□□ -2.22
CPSF6-207ENST00000551516 Q9BRP9 147 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 KCNQ1DNQ9H478 68 aa1.16□□□□□ -2.22
CPSF6-207ENST00000551516 A8MWP4 228 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 PFDN1O60925 122 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 PPP1R17O96001 155 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 IGKV4-1P06312 121 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 SPRR1BP22528 89 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 UBE2BP63146 152 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 LCE3AQ5TA76 89 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 ADM2Q7Z4H4 148 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 TOMM6Q96B49 74 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 TMEM141Q96I45 108 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 BTF3L4Q96K17 158 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 LCE3DQ9BYE3 92 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 BIN3Q9NQY0 253 aa1.15□□□□□ -2.23
CPSF6-207ENST00000551516 TINCRA0A1B0GVN0 87 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 A6NED7 52 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 PPBPP02775 128 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 HRES1P13985 223 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 MP68P56378 58 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 SLC51BQ86UW2 128 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 BOD1L2Q8IYS8 172 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 Q8N8P6 123 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 GNB1LQ9BYB4 327 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 KRTAP4-3Q9BYR4 195 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 CST9LQ9H4G1 147 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 BATF3Q9NR55 127 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 NAT8BQ9UHF3 227 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 OBSCNQ5VST9 7968 aa1.14□□□□□ -2.23
CPSF6-207ENST00000551516 IGKV2D-26A0A0A0MRZ7 120 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 TGIF2-C20orf24A0A0A6YYL0 155 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 C8orf87E5RJ46 101 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 K7EMI3 77 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 IGLC3P0DOY3 106 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 ZNF22P17026 224 aaPredicted RBP1.13□□□□□ -2.23
CPSF6-207ENST00000551516 FCER1GP30273 86 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 KRTAP10-10P60014 251 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 RPL37P61927 97 aaKnown RBP1.13□□□□□ -2.23
CPSF6-207ENST00000551516 C1orf195Q5TG92 126 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 PP632Q6XCG6 107 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 COX7B2Q8TF08 81 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 HIGD2AQ9BW72 106 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 LAMTOR2Q9Y2Q5 125 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 R4GN34 69 aa1.13□□□□□ -2.23
CPSF6-207ENST00000551516 KANTRA0A1W2PQU2 76 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 SLC25A20O43772 301 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 CKS2P33552 79 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 IFI27P40305 119 aaPredicted RBP1.12□□□□□ -2.23
CPSF6-207ENST00000551516 HERVK_113P63121 156 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 COX17Q14061 63 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms