RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 HIST1H2BDP58876 126 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 HIST1H2BCP62807 126 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 HIST2H2BEQ16778 126 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.42□□□□□ -0.58
GCN1-207ENST00000550471 HIST1H2BHQ93079 126 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 HIST1H2BNQ99877 126 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 HIST1H2BMQ99879 126 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 PPDPFQ9H3Y8 114 aa11.42□□□□□ -0.58
GCN1-207ENST00000550471 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
GCN1-207ENST00000550471 LINC01545Q5VT33 79 aa11.41□□□□□ -0.58
GCN1-207ENST00000550471 SPANXCQ9NY87 97 aa11.41□□□□□ -0.58
GCN1-207ENST00000550471 Q9BRP9 147 aa11.39□□□□□ -0.59
GCN1-207ENST00000550471 AKR1D1P51857 326 aa11.38□□□□□ -0.59
GCN1-207ENST00000550471 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
GCN1-207ENST00000550471 LINC00518Q8N0U6 118 aa11.37□□□□□ -0.59
GCN1-207ENST00000550471 COPS9Q8WXC6 57 aa11.37□□□□□ -0.59
GCN1-207ENST00000550471 SLC25A34Q6PIV7 304 aa11.36□□□□□ -0.59
GCN1-207ENST00000550471 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
GCN1-207ENST00000550471 LINC00308Q8TCZ7 52 aa11.36□□□□□ -0.59
GCN1-207ENST00000550471 ERC2-IT1O76042 136 aa11.35□□□□□ -0.59
GCN1-207ENST00000550471 MOBPQ13875 183 aa11.35□□□□□ -0.59
GCN1-207ENST00000550471 SPANXDQ9BXN6 97 aa11.35□□□□□ -0.59
GCN1-207ENST00000550471 IGLV9-49A0A0B4J1Y8 123 aa11.34□□□□□ -0.59
GCN1-207ENST00000550471 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
GCN1-207ENST00000550471 NPC2P61916 151 aa11.34□□□□□ -0.59
GCN1-207ENST00000550471 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
GCN1-207ENST00000550471 C20orf202A1L168 122 aa11.33□□□□□ -0.6
GCN1-207ENST00000550471 SLC25A20O43772 301 aa11.33□□□□□ -0.6
GCN1-207ENST00000550471 LITAFQ99732 161 aa11.33□□□□□ -0.6
GCN1-207ENST00000550471 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
GCN1-207ENST00000550471 OR13C6PQ8NH95 151 aa11.32□□□□□ -0.6
GCN1-207ENST00000550471 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
GCN1-207ENST00000550471 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
GCN1-207ENST00000550471 MUC2Q02817 5179 aa11.29□□□□□ -0.6
GCN1-207ENST00000550471 C9orf153Q5TBE3 101 aa11.28□□□□□ -0.6
GCN1-207ENST00000550471 Q6ZVH6 145 aa11.28□□□□□ -0.6
GCN1-207ENST00000550471 KRTAP13-3Q3SY46 172 aa11.27□□□□□ -0.61
GCN1-207ENST00000550471 IFITM1P13164 125 aa11.26□□□□□ -0.61
GCN1-207ENST00000550471 SPRR1BP22528 89 aa11.26□□□□□ -0.61
GCN1-207ENST00000550471 KRTDAPP60985 99 aa11.26□□□□□ -0.61
GCN1-207ENST00000550471 SCGB1D4Q6XE38 83 aa11.26□□□□□ -0.61
GCN1-207ENST00000550471 Q8N377 158 aa11.26□□□□□ -0.61
GCN1-207ENST00000550471 TRBV7-6A0A0J9YX20 115 aa11.24□□□□□ -0.61
GCN1-207ENST00000550471 LAMTOR3Q9UHA4 124 aa11.24□□□□□ -0.61
GCN1-207ENST00000550471 COX7BP24311 80 aa11.23□□□□□ -0.61
GCN1-207ENST00000550471 ELOF1P60002 83 aaKnown RBP11.23□□□□□ -0.61
GCN1-207ENST00000550471 SNRPEP62304 92 aaKnown RBP11.23□□□□□ -0.61
GCN1-207ENST00000550471 SEC61BP60468 96 aaKnown RBP11.21□□□□□ -0.61
GCN1-207ENST00000550471 ST20-AS1Q8NBB2 130 aa11.21□□□□□ -0.61
GCN1-207ENST00000550471 LIMD2Q9BT23 127 aa11.21□□□□□ -0.61
GCN1-207ENST00000550471 ASB16-AS1Q495Z4 193 aa11.2□□□□□ -0.62
GCN1-207ENST00000550471 C6orf99Q4VX62 202 aa11.19□□□□□ -0.62
GCN1-207ENST00000550471 TTTY13Q9BZ97 58 aa11.18□□□□□ -0.62
GCN1-207ENST00000550471 MUC17Q685J3 4493 aa11.18□□□□□ -0.62
GCN1-207ENST00000550471 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
GCN1-207ENST00000550471 A4D1N5 150 aa11.17□□□□□ -0.62
GCN1-207ENST00000550471 TAL2Q16559 108 aa11.16□□□□□ -0.62
GCN1-207ENST00000550471 TEX49A0A1B0GTD5 131 aa11.15□□□□□ -0.62
GCN1-207ENST00000550471 CD164Q04900 197 aa11.15□□□□□ -0.62
GCN1-207ENST00000550471 NHP2Q9NX24 153 aaKnown RBP11.14□□□□□ -0.63
GCN1-207ENST00000550471 TRAV13-2A0A0B4J235 113 aa11.13□□□□□ -0.63
GCN1-207ENST00000550471 A6NDN8 102 aa11.13□□□□□ -0.63
GCN1-207ENST00000550471 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
GCN1-207ENST00000550471 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
GCN1-207ENST00000550471 PRO1933Q9H354 126 aa11.12□□□□□ -0.63
GCN1-207ENST00000550471 XP32Q5T750 250 aa11.09□□□□□ -0.63
GCN1-207ENST00000550471 MUSTN1Q8IVN3 82 aa11.09□□□□□ -0.63
GCN1-207ENST00000550471 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
GCN1-207ENST00000550471 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
GCN1-207ENST00000550471 S100A2P29034 98 aa11.07□□□□□ -0.64
GCN1-207ENST00000550471 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
GCN1-207ENST00000550471 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
GCN1-207ENST00000550471 IGLV5-48A0A075B6I7 105 aa11.06□□□□□ -0.64
GCN1-207ENST00000550471 H7C2G1 150 aa11.06□□□□□ -0.64
GCN1-207ENST00000550471 VAMP3Q15836 100 aa11.06□□□□□ -0.64
GCN1-207ENST00000550471 Q5XG85 94 aa11.06□□□□□ -0.64
GCN1-207ENST00000550471 Q1RN00 199 aa11.04□□□□□ -0.64
GCN1-207ENST00000550471 FAT4Q6V0I7 4981 aa11.04□□□□□ -0.64
GCN1-207ENST00000550471 HRCT1Q6UXD1 115 aa11.02□□□□□ -0.65
GCN1-207ENST00000550471 S100A1P23297 94 aa11.01□□□□□ -0.65
GCN1-207ENST00000550471 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
GCN1-207ENST00000550471 S100A6P06703 90 aa11□□□□□ -0.65
GCN1-207ENST00000550471 LINC01547P58512 204 aaPredicted RBP11□□□□□ -0.65
GCN1-207ENST00000550471 SMIM11BQ8TCY0 68 aa11□□□□□ -0.65
GCN1-207ENST00000550471 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
GCN1-207ENST00000550471 SMIM29Q86T20 159 aa10.99□□□□□ -0.65
GCN1-207ENST00000550471 F8WEM9 126 aa10.96□□□□□ -0.65
GCN1-207ENST00000550471 TCL1BO95988 128 aa10.94□□□□□ -0.66
GCN1-207ENST00000550471 LINC00575Q6W349 94 aa10.92□□□□□ -0.66
GCN1-207ENST00000550471 hADV29S1A0JD25 119 aa10.91□□□□□ -0.66
GCN1-207ENST00000550471 Q6JHZ5 121 aa10.91□□□□□ -0.66
GCN1-207ENST00000550471 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
GCN1-207ENST00000550471 KRTAP9-2Q9BYQ4 174 aa10.9□□□□□ -0.66
GCN1-207ENST00000550471 BVES-AS1Q5T3Y7 98 aa10.89□□□□□ -0.67
GCN1-207ENST00000550471 C1orf195Q5TG92 126 aa10.88□□□□□ -0.67
GCN1-207ENST00000550471 KRTAP4-1Q9BYQ7 146 aa10.87□□□□□ -0.67
GCN1-207ENST00000550471 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
GCN1-207ENST00000550471 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
GCN1-207ENST00000550471 HIST1H4GQ99525 98 aa10.86□□□□□ -0.67
GCN1-207ENST00000550471 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms