RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PRR26Q8N8Z3 221 aa13.49□□□□□ -0.25
BRF1-216ENST00000550208 OR13C6PQ8NH95 151 aa13.49□□□□□ -0.25
BRF1-216ENST00000550208 COPS9Q8WXC6 57 aa13.49□□□□□ -0.25
BRF1-216ENST00000550208 ETDCA0A1B0GVM5 59 aa13.48□□□□□ -0.25
BRF1-216ENST00000550208 LINC00518Q8N0U6 118 aa13.48□□□□□ -0.25
BRF1-216ENST00000550208 C14orf144Q96I85 54 aa13.48□□□□□ -0.25
BRF1-216ENST00000550208 VAMP8Q9BV40 100 aa13.48□□□□□ -0.25
BRF1-216ENST00000550208 PPDPFQ9H3Y8 114 aa13.48□□□□□ -0.25
BRF1-216ENST00000550208 TNXBP22105 4242 aa13.47□□□□□ -0.25
BRF1-216ENST00000550208 TRAV23DV6A0A075B6W5 121 aa13.46□□□□□ -0.25
BRF1-216ENST00000550208 HIGD2AQ9BW72 106 aa13.46□□□□□ -0.25
BRF1-216ENST00000550208 DLEU1O43261 78 aa13.45□□□□□ -0.26
BRF1-216ENST00000550208 B5MCH6 92 aa13.44□□□□□ -0.26
BRF1-216ENST00000550208 ANAPC11Q9NYG5 84 aa13.44□□□□□ -0.26
BRF1-216ENST00000550208 ZNF73O43830 326 aaPredicted RBP13.42□□□□□ -0.26
BRF1-216ENST00000550208 SMCR5Q8TEV8 140 aa13.42□□□□□ -0.26
BRF1-216ENST00000550208 CBY1Q9Y3M2 126 aa13.4□□□□□ -0.26
BRF1-216ENST00000550208 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
BRF1-216ENST00000550208 LOC105371267A0A1B0GV96 52 aa13.37□□□□□ -0.27
BRF1-216ENST00000550208 A6NDN8 102 aa13.37□□□□□ -0.27
BRF1-216ENST00000550208 Q6ZRX8 168 aa13.37□□□□□ -0.27
BRF1-216ENST00000550208 HIST1H4GQ99525 98 aa13.37□□□□□ -0.27
BRF1-216ENST00000550208 A0A087X002 238 aa13.36□□□□□ -0.27
BRF1-216ENST00000550208 A4D1N5 150 aa13.36□□□□□ -0.27
BRF1-216ENST00000550208 Q9BRP9 147 aa13.36□□□□□ -0.27
BRF1-216ENST00000550208 ERC2-IT1O76042 136 aa13.35□□□□□ -0.27
BRF1-216ENST00000550208 CRYGAP11844 174 aa13.34□□□□□ -0.27
BRF1-216ENST00000550208 HINT1P49773 126 aaPredicted RBP13.34□□□□□ -0.27
BRF1-216ENST00000550208 SPRR4Q96PI1 79 aa13.34□□□□□ -0.27
BRF1-216ENST00000550208 HIGD1BQ9P298 99 aa13.34□□□□□ -0.27
BRF1-216ENST00000550208 TRAV13-2A0A0B4J235 113 aa13.33□□□□□ -0.28
BRF1-216ENST00000550208 RPL13AP40429 203 aaKnown RBP13.33□□□□□ -0.28
BRF1-216ENST00000550208 C2orf91Q6ZV80 131 aa13.33□□□□□ -0.28
BRF1-216ENST00000550208 FAM229BQ4G0N7 80 aa13.32□□□□□ -0.28
BRF1-216ENST00000550208 C6orf99Q4VX62 202 aa13.32□□□□□ -0.28
BRF1-216ENST00000550208 KRTAP13-2Q52LG2 175 aa13.3□□□□□ -0.28
BRF1-216ENST00000550208 ZNF706Q9Y5V0 76 aaPredicted RBP13.29□□□□□ -0.28
BRF1-216ENST00000550208 COX7BP24311 80 aa13.28□□□□□ -0.28
BRF1-216ENST00000550208 TYMSOSQ8TAI1 123 aa13.27□□□□□ -0.29
BRF1-216ENST00000550208 SMIM11BQ8TCY0 68 aa13.27□□□□□ -0.29
BRF1-216ENST00000550208 C12orf57Q99622 126 aa13.27□□□□□ -0.29
BRF1-216ENST00000550208 SMIM6P0DI80 62 aa13.26□□□□□ -0.29
BRF1-216ENST00000550208 ELOF1P60002 83 aaKnown RBP13.25□□□□□ -0.29
BRF1-216ENST00000550208 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
BRF1-216ENST00000550208 TRBV7-6A0A0J9YX20 115 aa13.23□□□□□ -0.29
BRF1-216ENST00000550208 C3orf22Q8N5N4 141 aa13.23□□□□□ -0.29
BRF1-216ENST00000550208 TAL2Q16559 108 aa13.22□□□□□ -0.29
BRF1-216ENST00000550208 LINC00483Q53H64 154 aa13.22□□□□□ -0.29
BRF1-216ENST00000550208 ST20-AS1Q8NBB2 130 aa13.22□□□□□ -0.29
BRF1-216ENST00000550208 DHRS4-AS1Q9P1J3 65 aa13.22□□□□□ -0.29
BRF1-216ENST00000550208 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
BRF1-216ENST00000550208 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
BRF1-216ENST00000550208 CFC1P0CG37 223 aa13.2□□□□□ -0.3
BRF1-216ENST00000550208 CEND1Q8N111 149 aa13.2□□□□□ -0.3
BRF1-216ENST00000550208 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
BRF1-216ENST00000550208 PRO1933Q9H354 126 aa13.17□□□□□ -0.3
BRF1-216ENST00000550208 HMCN2Q8NDA2 5059 aa13.16□□□□□ -0.3
BRF1-216ENST00000550208 RAB37Q96AX2 223 aa13.15□□□□□ -0.3
BRF1-216ENST00000550208 TSPAN13O95857 204 aa13.13□□□□□ -0.31
BRF1-216ENST00000550208 FXYD2P54710 66 aa13.13□□□□□ -0.31
BRF1-216ENST00000550208 VAMP3Q15836 100 aa13.13□□□□□ -0.31
BRF1-216ENST00000550208 A0A0B4J2C4 111 aa13.12□□□□□ -0.31
BRF1-216ENST00000550208 H7C2G1 150 aa13.12□□□□□ -0.31
BRF1-216ENST00000550208 HSD52Q0P140 79 aa13.12□□□□□ -0.31
BRF1-216ENST00000550208 LINC00304Q8N9R0 145 aa13.11□□□□□ -0.31
BRF1-216ENST00000550208 IGLV9-49A0A0B4J1Y8 123 aa13.1□□□□□ -0.31
BRF1-216ENST00000550208 TMEM238LA0A1B0GVL6 79 aa13.09□□□□□ -0.31
BRF1-216ENST00000550208 A6NJY4 79 aa13.09□□□□□ -0.31
BRF1-216ENST00000550208 SPRR1BP22528 89 aa13.09□□□□□ -0.31
BRF1-216ENST00000550208 DEFB105AQ8NG35 78 aa13.09□□□□□ -0.31
BRF1-216ENST00000550208 LINC00575Q6W349 94 aa13.08□□□□□ -0.32
BRF1-216ENST00000550208 MOBPQ13875 183 aa13.06□□□□□ -0.32
BRF1-216ENST00000550208 Q8NBF4 154 aa13.06□□□□□ -0.32
BRF1-216ENST00000550208 NHP2Q9NX24 153 aaKnown RBP13.06□□□□□ -0.32
BRF1-216ENST00000550208 PRO1854Q9UHT4 67 aa13.05□□□□□ -0.32
BRF1-216ENST00000550208 SLC25A20O43772 301 aa13.04□□□□□ -0.32
BRF1-216ENST00000550208 SSBP3-AS1Q7Z2R9 100 aa13.04□□□□□ -0.32
BRF1-216ENST00000550208 TEX49A0A1B0GTD5 131 aa13.03□□□□□ -0.32
BRF1-216ENST00000550208 LINC01547P58512 204 aaPredicted RBP13.03□□□□□ -0.32
BRF1-216ENST00000550208 BVES-AS1Q5T3Y7 98 aa13.03□□□□□ -0.32
BRF1-216ENST00000550208 hADV29S1A0JD25 119 aa13.01□□□□□ -0.33
BRF1-216ENST00000550208 Q1RN00 199 aa13.01□□□□□ -0.33
BRF1-216ENST00000550208 C9orf153Q5TBE3 101 aa13.01□□□□□ -0.33
BRF1-216ENST00000550208 LAMTOR3Q9UHA4 124 aa13.01□□□□□ -0.33
BRF1-216ENST00000550208 IGLV5-48A0A075B6I7 105 aa13□□□□□ -0.33
BRF1-216ENST00000550208 C4orf48Q5BLP8 95 aa13□□□□□ -0.33
BRF1-216ENST00000550208 SPAG11AQ6PDA7 123 aa13□□□□□ -0.33
BRF1-216ENST00000550208 K7ERJ3 54 aa12.98□□□□□ -0.33
BRF1-216ENST00000550208 SMIM29Q86T20 159 aa12.98□□□□□ -0.33
BRF1-216ENST00000550208 Q8N377 158 aa12.98□□□□□ -0.33
BRF1-216ENST00000550208 TSTD3H0UI37 97 aa12.97□□□□□ -0.33
BRF1-216ENST00000550208 CTAG1AP78358 180 aa12.97□□□□□ -0.33
BRF1-216ENST00000550208 Q6ZQY7 126 aa12.96□□□□□ -0.33
BRF1-216ENST00000550208 H0YGX0 51 aa12.95□□□□□ -0.34
BRF1-216ENST00000550208 PRR4Q16378 134 aa12.94□□□□□ -0.34
BRF1-216ENST00000550208 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
BRF1-216ENST00000550208 TRIAP1O43715 76 aa12.91□□□□□ -0.34
BRF1-216ENST00000550208 SPINK1P00995 79 aa12.91□□□□□ -0.34
BRF1-216ENST00000550208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.91□□□□□ -0.34
BRF1-216ENST00000550208 RETNLBQ9BQ08 111 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms