RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 NPC2P61916 151 aa7.55□□□□□ -1.2
GCN1-206ENST00000549815 RPS29P62273 56 aaKnown RBP7.55□□□□□ -1.2
GCN1-206ENST00000549815 S100A7L2Q5SY68 101 aa7.55□□□□□ -1.2
GCN1-206ENST00000549815 LITAFQ99732 161 aa7.54□□□□□ -1.2
GCN1-206ENST00000549815 SYS1-DBNDD2H3BUS1 97 aa7.53□□□□□ -1.2
GCN1-206ENST00000549815 ZNF73O43830 326 aaPredicted RBP7.53□□□□□ -1.2
GCN1-206ENST00000549815 Q8N377 158 aa7.53□□□□□ -1.2
GCN1-206ENST00000549815 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BKO60814 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BJP06899 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BOP23527 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BBP33778 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BDP58876 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BCP62807 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST2H2BEQ16778 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.51□□□□□ -1.21
GCN1-206ENST00000549815 ST20-AS1Q8NBB2 130 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BHQ93079 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BNQ99877 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 HIST1H2BMQ99879 126 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
GCN1-206ENST00000549815 TIMM17BO60830 172 aa7.5□□□□□ -1.21
GCN1-206ENST00000549815 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
GCN1-206ENST00000549815 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
GCN1-206ENST00000549815 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
GCN1-206ENST00000549815 SLC25A20O43772 301 aa7.48□□□□□ -1.21
GCN1-206ENST00000549815 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
GCN1-206ENST00000549815 SPRR1BP22528 89 aa7.47□□□□□ -1.21
GCN1-206ENST00000549815 PET117Q6UWS5 81 aa7.47□□□□□ -1.21
GCN1-206ENST00000549815 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.22
GCN1-206ENST00000549815 TTTY13Q9BZ97 58 aa7.46□□□□□ -1.22
GCN1-206ENST00000549815 CBY1Q9Y3M2 126 aa7.46□□□□□ -1.22
GCN1-206ENST00000549815 ZNF815PA8K554 130 aa7.45□□□□□ -1.22
GCN1-206ENST00000549815 HINT1P49773 126 aaPredicted RBP7.45□□□□□ -1.22
GCN1-206ENST00000549815 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
GCN1-206ENST00000549815 XP32Q5T750 250 aa7.44□□□□□ -1.22
GCN1-206ENST00000549815 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
GCN1-206ENST00000549815 SPANXDQ9BXN6 97 aa7.44□□□□□ -1.22
GCN1-206ENST00000549815 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
GCN1-206ENST00000549815 ELOF1P60002 83 aaKnown RBP7.42□□□□□ -1.22
GCN1-206ENST00000549815 COA6Q5JTJ3 125 aaKnown RBP7.42□□□□□ -1.22
GCN1-206ENST00000549815 DHRS4-AS1Q9P1J3 65 aa7.42□□□□□ -1.22
GCN1-206ENST00000549815 LINC00518Q8N0U6 118 aa7.41□□□□□ -1.22
GCN1-206ENST00000549815 COX7BP24311 80 aa7.4□□□□□ -1.22
GCN1-206ENST00000549815 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
GCN1-206ENST00000549815 SLC25A34Q6PIV7 304 aa7.39□□□□□ -1.23
GCN1-206ENST00000549815 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
GCN1-206ENST00000549815 KRTDAPP60985 99 aa7.37□□□□□ -1.23
GCN1-206ENST00000549815 LAMTOR3Q9UHA4 124 aa7.37□□□□□ -1.23
GCN1-206ENST00000549815 TRBV7-6A0A0J9YX20 115 aa7.36□□□□□ -1.23
GCN1-206ENST00000549815 HRCT1Q6UXD1 115 aa7.36□□□□□ -1.23
GCN1-206ENST00000549815 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
GCN1-206ENST00000549815 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
GCN1-206ENST00000549815 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
GCN1-206ENST00000549815 SCGB1D4Q6XE38 83 aa7.35□□□□□ -1.23
GCN1-206ENST00000549815 IFITM1P13164 125 aa7.34□□□□□ -1.23
GCN1-206ENST00000549815 CD164Q04900 197 aa7.34□□□□□ -1.23
GCN1-206ENST00000549815 TAL2Q16559 108 aa7.34□□□□□ -1.23
GCN1-206ENST00000549815 Q1RN00 199 aa7.34□□□□□ -1.23
GCN1-206ENST00000549815 IGLV5-48A0A075B6I7 105 aa7.33□□□□□ -1.24
GCN1-206ENST00000549815 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
GCN1-206ENST00000549815 Q6ZVH6 145 aa7.33□□□□□ -1.24
GCN1-206ENST00000549815 PCP2Q8IVA1 136 aa7.33□□□□□ -1.24
GCN1-206ENST00000549815 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
GCN1-206ENST00000549815 DEFB105AQ8NG35 78 aa7.33□□□□□ -1.24
GCN1-206ENST00000549815 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
GCN1-206ENST00000549815 C20orf202A1L168 122 aa7.32□□□□□ -1.24
GCN1-206ENST00000549815 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
GCN1-206ENST00000549815 ATOH7Q8N100 152 aa7.32□□□□□ -1.24
GCN1-206ENST00000549815 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
GCN1-206ENST00000549815 PRO1933Q9H354 126 aa7.32□□□□□ -1.24
GCN1-206ENST00000549815 Q5XG85 94 aa7.31□□□□□ -1.24
GCN1-206ENST00000549815 A6NDN8 102 aa7.3□□□□□ -1.24
GCN1-206ENST00000549815 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
GCN1-206ENST00000549815 C9orf92A6NGG3 77 aa7.29□□□□□ -1.24
GCN1-206ENST00000549815 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
GCN1-206ENST00000549815 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
GCN1-206ENST00000549815 H7C2G1 150 aa7.28□□□□□ -1.24
GCN1-206ENST00000549815 PCOTHQ58A44 107 aa7.28□□□□□ -1.24
GCN1-206ENST00000549815 A4D1N5 150 aa7.27□□□□□ -1.25
GCN1-206ENST00000549815 AKR1D1P51857 326 aa7.27□□□□□ -1.25
GCN1-206ENST00000549815 SMIM11BQ8TCY0 68 aa7.27□□□□□ -1.25
GCN1-206ENST00000549815 TRAV13-2A0A0B4J235 113 aa7.26□□□□□ -1.25
GCN1-206ENST00000549815 SNRPEP62304 92 aaKnown RBP7.26□□□□□ -1.25
GCN1-206ENST00000549815 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
GCN1-206ENST00000549815 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
GCN1-206ENST00000549815 NHP2Q9NX24 153 aaKnown RBP7.24□□□□□ -1.25
GCN1-206ENST00000549815 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
GCN1-206ENST00000549815 HIST3H2BBQ8N257 126 aa7.23□□□□□ -1.25
GCN1-206ENST00000549815 HIST1H2BLQ99880 126 aa7.22□□□□□ -1.25
GCN1-206ENST00000549815 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
GCN1-206ENST00000549815 MT1HP80294 61 aa7.21□□□□□ -1.26
GCN1-206ENST00000549815 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
GCN1-206ENST00000549815 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
GCN1-206ENST00000549815 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
GCN1-206ENST00000549815 VAMP3Q15836 100 aa7.17□□□□□ -1.26
GCN1-206ENST00000549815 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
GCN1-206ENST00000549815 TCL1BO95988 128 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms