RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 GAGE2AQ6NT46 116 aa13.83□□□□□ -0.2
USP44-205ENST00000549639 SOSTDC1Q6X4U4 206 aa13.83□□□□□ -0.2
USP44-205ENST00000549639 Q8NBF4 154 aa13.83□□□□□ -0.2
USP44-205ENST00000549639 A0A0U1RQV1 116 aa13.82□□□□□ -0.2
USP44-205ENST00000549639 SPINK1P00995 79 aa13.82□□□□□ -0.2
USP44-205ENST00000549639 Q9BRP9 147 aa13.82□□□□□ -0.2
USP44-205ENST00000549639 CDIP1Q9H305 208 aa13.82□□□□□ -0.2
USP44-205ENST00000549639 TIMM17BO60830 172 aa13.81□□□□□ -0.2
USP44-205ENST00000549639 FP248Q71RG6 208 aaPredicted RBP13.81□□□□□ -0.2
USP44-205ENST00000549639 ERC2-IT1O76042 136 aa13.8□□□□□ -0.2
USP44-205ENST00000549639 NPC2P61916 151 aa13.8□□□□□ -0.2
USP44-205ENST00000549639 ZNF73O43830 326 aaPredicted RBP13.79□□□□□ -0.2
USP44-205ENST00000549639 SSBP3-AS1Q7Z2R9 100 aa13.79□□□□□ -0.2
USP44-205ENST00000549639 SPANXCQ9NY87 97 aa13.79□□□□□ -0.2
USP44-205ENST00000549639 EIF4EBP3O60516 100 aaPredicted RBP13.78□□□□□ -0.2
USP44-205ENST00000549639 HINT1P49773 126 aaPredicted RBP13.77□□□□□ -0.21
USP44-205ENST00000549639 LINC00308Q8TCZ7 52 aa13.77□□□□□ -0.21
USP44-205ENST00000549639 LITAFQ99732 161 aa13.77□□□□□ -0.21
USP44-205ENST00000549639 C5orf52A6NGY3 159 aa13.76□□□□□ -0.21
USP44-205ENST00000549639 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
USP44-205ENST00000549639 ZNF815PA8K554 130 aa13.74□□□□□ -0.21
USP44-205ENST00000549639 C3orf79P0CE67 100 aa13.74□□□□□ -0.21
USP44-205ENST00000549639 RPS29P62273 56 aaKnown RBP13.74□□□□□ -0.21
USP44-205ENST00000549639 IGLV9-49A0A0B4J1Y8 123 aa13.73□□□□□ -0.21
USP44-205ENST00000549639 MOBPQ13875 183 aa13.73□□□□□ -0.21
USP44-205ENST00000549639 OR13C6PQ8NH95 151 aa13.7□□□□□ -0.22
USP44-205ENST00000549639 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
USP44-205ENST00000549639 MUC17Q685J3 4493 aa13.69□□□□□ -0.22
USP44-205ENST00000549639 LINC00518Q8N0U6 118 aa13.69□□□□□ -0.22
USP44-205ENST00000549639 C20orf202A1L168 122 aa13.68□□□□□ -0.22
USP44-205ENST00000549639 KRTDAPP60985 99 aa13.68□□□□□ -0.22
USP44-205ENST00000549639 AKR1D1P51857 326 aa13.66□□□□□ -0.22
USP44-205ENST00000549639 DHRS4-AS1Q9P1J3 65 aa13.66□□□□□ -0.22
USP44-205ENST00000549639 COPS9Q8WXC6 57 aa13.65□□□□□ -0.22
USP44-205ENST00000549639 TTTY13Q9BZ97 58 aa13.65□□□□□ -0.22
USP44-205ENST00000549639 C9orf153Q5TBE3 101 aa13.63□□□□□ -0.23
USP44-205ENST00000549639 SLC25A34Q6PIV7 304 aa13.63□□□□□ -0.23
USP44-205ENST00000549639 SCGB1D4Q6XE38 83 aa13.63□□□□□ -0.23
USP44-205ENST00000549639 SLC25A20O43772 301 aa13.62□□□□□ -0.23
USP44-205ENST00000549639 KRTAP13-3Q3SY46 172 aa13.62□□□□□ -0.23
USP44-205ENST00000549639 ST20-AS1Q8NBB2 130 aa13.62□□□□□ -0.23
USP44-205ENST00000549639 Q8N377 158 aa13.61□□□□□ -0.23
USP44-205ENST00000549639 SPRR1BP22528 89 aa13.6□□□□□ -0.23
USP44-205ENST00000549639 Q6ZVH6 145 aa13.6□□□□□ -0.23
USP44-205ENST00000549639 IFITM1P13164 125 aa13.59□□□□□ -0.23
USP44-205ENST00000549639 ELOF1P60002 83 aaKnown RBP13.58□□□□□ -0.24
USP44-205ENST00000549639 COX7BP24311 80 aa13.57□□□□□ -0.24
USP44-205ENST00000549639 C6orf99Q4VX62 202 aa13.56□□□□□ -0.24
USP44-205ENST00000549639 ANKRD39Q53RE8 183 aa13.56□□□□□ -0.24
USP44-205ENST00000549639 TRBV7-6A0A0J9YX20 115 aa13.55□□□□□ -0.24
USP44-205ENST00000549639 FAT4Q6V0I7 4981 aa13.55□□□□□ -0.24
USP44-205ENST00000549639 SNRPEP62304 92 aaKnown RBP13.54□□□□□ -0.24
USP44-205ENST00000549639 LAMTOR3Q9UHA4 124 aa13.54□□□□□ -0.24
USP44-205ENST00000549639 ATOH7Q8N100 152 aa13.51□□□□□ -0.25
USP44-205ENST00000549639 A0A1B0GWB2 263 aa13.49□□□□□ -0.25
USP44-205ENST00000549639 ASB16-AS1Q495Z4 193 aa13.49□□□□□ -0.25
USP44-205ENST00000549639 A6NDN8 102 aa13.48□□□□□ -0.25
USP44-205ENST00000549639 TAL2Q16559 108 aa13.48□□□□□ -0.25
USP44-205ENST00000549639 PCP2Q8IVA1 136 aa13.48□□□□□ -0.25
USP44-205ENST00000549639 LIMD2Q9BT23 127 aa13.48□□□□□ -0.25
USP44-205ENST00000549639 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
USP44-205ENST00000549639 TEX49A0A1B0GTD5 131 aa13.46□□□□□ -0.25
USP44-205ENST00000549639 SEC61BP60468 96 aaKnown RBP13.46□□□□□ -0.25
USP44-205ENST00000549639 A4D1N5 150 aa13.45□□□□□ -0.26
USP44-205ENST00000549639 TRAV13-2A0A0B4J235 113 aa13.44□□□□□ -0.26
USP44-205ENST00000549639 LCE2AQ5TA79 106 aaPredicted RBP13.43□□□□□ -0.26
USP44-205ENST00000549639 S100A2P29034 98 aa13.42□□□□□ -0.26
USP44-205ENST00000549639 CD164Q04900 197 aa13.42□□□□□ -0.26
USP44-205ENST00000549639 DEFB105AQ8NG35 78 aa13.42□□□□□ -0.26
USP44-205ENST00000549639 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
USP44-205ENST00000549639 PRO1933Q9H354 126 aa13.41□□□□□ -0.26
USP44-205ENST00000549639 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
USP44-205ENST00000549639 HSBP1L1C9JCN9 74 aa13.39□□□□□ -0.27
USP44-205ENST00000549639 Q1RN00 199 aa13.39□□□□□ -0.27
USP44-205ENST00000549639 HIST1H2BLQ99880 126 aa13.39□□□□□ -0.27
USP44-205ENST00000549639 IGLV5-48A0A075B6I7 105 aa13.38□□□□□ -0.27
USP44-205ENST00000549639 XP32Q5T750 250 aa13.38□□□□□ -0.27
USP44-205ENST00000549639 HRCT1Q6UXD1 115 aa13.37□□□□□ -0.27
USP44-205ENST00000549639 S100A1P23297 94 aa13.36□□□□□ -0.27
USP44-205ENST00000549639 LINC01547P58512 204 aaPredicted RBP13.34□□□□□ -0.27
USP44-205ENST00000549639 SMIM29Q86T20 159 aa13.34□□□□□ -0.27
USP44-205ENST00000549639 SMIM11BQ8TCY0 68 aa13.34□□□□□ -0.27
USP44-205ENST00000549639 H7C2G1 150 aa13.33□□□□□ -0.28
USP44-205ENST00000549639 S100A6P06703 90 aa13.33□□□□□ -0.28
USP44-205ENST00000549639 VAMP3Q15836 100 aa13.32□□□□□ -0.28
USP44-205ENST00000549639 Q5XG85 94 aa13.31□□□□□ -0.28
USP44-205ENST00000549639 KRTAP4-1Q9BYQ7 146 aa13.23□□□□□ -0.29
USP44-205ENST00000549639 LINC00575Q6W349 94 aa13.22□□□□□ -0.29
USP44-205ENST00000549639 F8WEM9 126 aa13.2□□□□□ -0.3
USP44-205ENST00000549639 SCGB1D1O95968 90 aa13.19□□□□□ -0.3
USP44-205ENST00000549639 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
USP44-205ENST00000549639 C9orf92A6NGG3 77 aa13.17□□□□□ -0.3
USP44-205ENST00000549639 C1orf195Q5TG92 126 aa13.17□□□□□ -0.3
USP44-205ENST00000549639 TCL1BO95988 128 aa13.16□□□□□ -0.3
USP44-205ENST00000549639 HIST1H4GQ99525 98 aa13.16□□□□□ -0.3
USP44-205ENST00000549639 COX8AP10176 69 aa13.15□□□□□ -0.3
USP44-205ENST00000549639 Q6ZQY7 126 aa13.15□□□□□ -0.3
USP44-205ENST00000549639 KRTAP9-2Q9BYQ4 174 aa13.15□□□□□ -0.3
USP44-205ENST00000549639 BVES-AS1Q5T3Y7 98 aa13.14□□□□□ -0.31
USP44-205ENST00000549639 A0A0G2JQZ4 141 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms