RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 DIRC1Q969H9 104 aa6.47□□□□□ -1.37
RAB5B-206ENST00000549505 ZNF73O43830 326 aaPredicted RBP6.47□□□□□ -1.37
RAB5B-206ENST00000549505 RPL18AQ02543 176 aaKnown RBP6.47□□□□□ -1.37
RAB5B-206ENST00000549505 LINC00528Q8N1L1 170 aa6.47□□□□□ -1.37
RAB5B-206ENST00000549505 IMUPQ9GZP8 106 aa6.47□□□□□ -1.37
RAB5B-206ENST00000549505 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.37
RAB5B-206ENST00000549505 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.37
RAB5B-206ENST00000549505 GHRHP01286 108 aa6.46□□□□□ -1.38
RAB5B-206ENST00000549505 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
RAB5B-206ENST00000549505 KRTAP1-5Q9BYS1 174 aa6.45□□□□□ -1.38
RAB5B-206ENST00000549505 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
RAB5B-206ENST00000549505 FLNBO75369 2602 aaKnown RBP6.45□□□□□ -1.38
RAB5B-206ENST00000549505 CASC10Q5T4H9 136 aa6.45□□□□□ -1.38
RAB5B-206ENST00000549505 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
RAB5B-206ENST00000549505 DNAH7Q8WXX0 4024 aa6.44□□□□□ -1.38
RAB5B-206ENST00000549505 PRYO14603 147 aa6.44□□□□□ -1.38
RAB5B-206ENST00000549505 COX7BP24311 80 aa6.44□□□□□ -1.38
RAB5B-206ENST00000549505 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
RAB5B-206ENST00000549505 CCKP06307 115 aa6.44□□□□□ -1.38
RAB5B-206ENST00000549505 C14orf177Q52M58 125 aa6.44□□□□□ -1.38
RAB5B-206ENST00000549505 HIST1H4AP62805 103 aaKnown RBP6.43□□□□□ -1.38
RAB5B-206ENST00000549505 LINC00643Q86TS7 51 aa6.43□□□□□ -1.38
RAB5B-206ENST00000549505 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
RAB5B-206ENST00000549505 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
RAB5B-206ENST00000549505 PDE6GP18545 87 aa6.42□□□□□ -1.38
RAB5B-206ENST00000549505 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
RAB5B-206ENST00000549505 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
RAB5B-206ENST00000549505 V9GYY9 64 aa6.41□□□□□ -1.38
RAB5B-206ENST00000549505 LRCOL1A6NCL2 159 aa6.41□□□□□ -1.38
RAB5B-206ENST00000549505 C16orf90A8MZG2 172 aa6.4□□□□□ -1.38
RAB5B-206ENST00000549505 PRO0628Q9UI54 55 aa6.4□□□□□ -1.38
RAB5B-206ENST00000549505 CRYGAP11844 174 aa6.4□□□□□ -1.39
RAB5B-206ENST00000549505 VPS13DQ5THJ4 4388 aa6.39□□□□□ -1.39
RAB5B-206ENST00000549505 NBDYA0A0U1RRE5 68 aa6.39□□□□□ -1.39
RAB5B-206ENST00000549505 Q6ZQT0 140 aa6.39□□□□□ -1.39
RAB5B-206ENST00000549505 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
RAB5B-206ENST00000549505 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
RAB5B-206ENST00000549505 TMEM258P61165 79 aa6.39□□□□□ -1.39
RAB5B-206ENST00000549505 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
RAB5B-206ENST00000549505 Q6JHZ5 121 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 DHRS4-AS1Q9P1J3 65 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 DNAH6Q9C0G6 4158 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 IGLV5-48A0A075B6I7 105 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 ATOX1O00244 68 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
RAB5B-206ENST00000549505 NKAPP1Q8N9T2 125 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 COL7A1Q02388 2944 aa6.38□□□□□ -1.39
RAB5B-206ENST00000549505 COL6A5A8TX70 2615 aa6.37□□□□□ -1.39
RAB5B-206ENST00000549505 C1orf195Q5TG92 126 aa6.37□□□□□ -1.39
RAB5B-206ENST00000549505 NBEAL1Q6ZS30 2694 aa6.37□□□□□ -1.39
RAB5B-206ENST00000549505 LINC01547P58512 204 aaPredicted RBP6.37□□□□□ -1.39
RAB5B-206ENST00000549505 Q6ZRX8 168 aa6.37□□□□□ -1.39
RAB5B-206ENST00000549505 A0A1B0GW54 56 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 ATP5EP2Q5VTU8 51 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 Q6ZQY7 126 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
RAB5B-206ENST00000549505 LINC00474Q9P2X8 69 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 Q6ZR54 194 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 C9orf163Q8N9P6 203 aa6.36□□□□□ -1.39
RAB5B-206ENST00000549505 H0Y9J4 135 aa6.35□□□□□ -1.39
RAB5B-206ENST00000549505 RBM3P98179 157 aaKnown RBP6.35□□□□□ -1.39
RAB5B-206ENST00000549505 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
RAB5B-206ENST00000549505 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
RAB5B-206ENST00000549505 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
RAB5B-206ENST00000549505 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
RAB5B-206ENST00000549505 TNP2Q05952 138 aa6.34□□□□□ -1.4
RAB5B-206ENST00000549505 Q9BRP9 147 aa6.33□□□□□ -1.4
RAB5B-206ENST00000549505 CSMD3Q7Z407 3707 aa6.32□□□□□ -1.4
RAB5B-206ENST00000549505 PLECQ15149 4684 aaKnown RBP6.32□□□□□ -1.4
RAB5B-206ENST00000549505 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
RAB5B-206ENST00000549505 A0A096LNI7 61 aa6.32□□□□□ -1.4
RAB5B-206ENST00000549505 Q8N377 158 aa6.31□□□□□ -1.4
RAB5B-206ENST00000549505 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
RAB5B-206ENST00000549505 IGLV8-61A0A075B6I0 122 aa6.29□□□□□ -1.4
RAB5B-206ENST00000549505 A0A1W2PNN7 141 aa6.29□□□□□ -1.4
RAB5B-206ENST00000549505 PSCAO43653 123 aa6.29□□□□□ -1.4
RAB5B-206ENST00000549505 SPRR1BP22528 89 aa6.29□□□□□ -1.4
RAB5B-206ENST00000549505 FAM19A1Q7Z5A9 133 aa6.28□□□□□ -1.4
RAB5B-206ENST00000549505 BCE1O60756 84 aa6.28□□□□□ -1.4
RAB5B-206ENST00000549505 NOTCH1P46531 2555 aa6.28□□□□□ -1.4
RAB5B-206ENST00000549505 STARD9Q9P2P6 4700 aa6.28□□□□□ -1.4
RAB5B-206ENST00000549505 LAMTOR3Q9UHA4 124 aa6.28□□□□□ -1.4
RAB5B-206ENST00000549505 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
RAB5B-206ENST00000549505 RPL37AP8A6NKH3 93 aa6.27□□□□□ -1.41
RAB5B-206ENST00000549505 CXCL6P80162 114 aa6.27□□□□□ -1.41
RAB5B-206ENST00000549505 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
RAB5B-206ENST00000549505 FP248Q71RG6 208 aaPredicted RBP6.27□□□□□ -1.41
RAB5B-206ENST00000549505 KRTAP13-1Q8IUC0 172 aa6.26□□□□□ -1.41
RAB5B-206ENST00000549505 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
RAB5B-206ENST00000549505 A0A087WTM6 91 aa6.26□□□□□ -1.41
RAB5B-206ENST00000549505 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
RAB5B-206ENST00000549505 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
RAB5B-206ENST00000549505 ALMS1Q8TCU4 4167 aa6.25□□□□□ -1.41
RAB5B-206ENST00000549505 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
RAB5B-206ENST00000549505 LYSTQ99698 3801 aa6.24□□□□□ -1.41
RAB5B-206ENST00000549505 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
RAB5B-206ENST00000549505 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
RAB5B-206ENST00000549505 F8WEM9 126 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms