RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 H7C2G1 150 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 FAM19A5Q7Z5A7 132 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 SPACA4Q8TDM5 124 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 PKIGQ9Y2B9 76 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
DEPDC4-207ENST00000549249 TRBV10-3A0A0K0K1G6 114 aa5.11□□□□□ -1.59
DEPDC4-207ENST00000549249 H3BUT2 72 aa5.11□□□□□ -1.59
DEPDC4-207ENST00000549249 M0R378 163 aa5.11□□□□□ -1.59
DEPDC4-207ENST00000549249 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
DEPDC4-207ENST00000549249 C7orf33Q8WU49 177 aa5.11□□□□□ -1.59
DEPDC4-207ENST00000549249 GAGE10A6NGK3 116 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 EPM2AB3EWF7 344 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 TRIAP1O43715 76 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 KRTAP10-1P60331 282 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 OR13C6PQ8NH95 151 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 SMIM11BQ8TCY0 68 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 C22orf24Q9Y442 160 aa5.1□□□□□ -1.59
DEPDC4-207ENST00000549249 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 A0A1B0GV90 55 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 M0QXV9 152 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 RPL28P46779 137 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 Q1RN00 199 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 Q8N1X5 172 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 NKAPP1Q8N9T2 125 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 LINC00167Q96N53 147 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 TMEM126AQ9H061 195 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 FAM30AQ9NZY2 134 aa5.09□□□□□ -1.59
DEPDC4-207ENST00000549249 A0A087WYN8 130 aa5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 A0A1W2PPM0 123 aa5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 S100A7L2Q5SY68 101 aa5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 Q6ZSA8 131 aa5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 PHF5AQ7RTV0 110 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 MRPL55Q7Z7F7 128 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 LINC00474Q9P2X8 69 aa5.08□□□□□ -1.6
DEPDC4-207ENST00000549249 PKD1P98161 4303 aa5.07□□□□□ -1.6
DEPDC4-207ENST00000549249 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
DEPDC4-207ENST00000549249 TRAV23DV6A0A075B6W5 121 aa5.07□□□□□ -1.6
DEPDC4-207ENST00000549249 RPL37AP8A6NKH3 93 aa5.07□□□□□ -1.6
DEPDC4-207ENST00000549249 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
DEPDC4-207ENST00000549249 PSMB2P49721 201 aa5.06□□□□□ -1.6
DEPDC4-207ENST00000549249 KCNQ1DNQ9H478 68 aa5.06□□□□□ -1.6
DEPDC4-207ENST00000549249 DNAH8Q96JB1 4490 aa5.06□□□□□ -1.6
DEPDC4-207ENST00000549249 RYR1P21817 5038 aa5.05□□□□□ -1.6
DEPDC4-207ENST00000549249 FABP2P12104 132 aa5.05□□□□□ -1.6
DEPDC4-207ENST00000549249 HAMPP81172 84 aa5.05□□□□□ -1.6
DEPDC4-207ENST00000549249 C6orf99Q4VX62 202 aa5.05□□□□□ -1.6
DEPDC4-207ENST00000549249 CLEC2BQ92478 149 aa5.05□□□□□ -1.6
DEPDC4-207ENST00000549249 FAM218AQ96MZ4 157 aa5.05□□□□□ -1.6
DEPDC4-207ENST00000549249 PCLOQ9Y6V0 5065 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 PRYO14603 147 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 ZNF73O43830 326 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 TCL1BO95988 128 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 SPRR1AP35321 89 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 SCXQ7RTU7 201 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 DIRC1Q969H9 104 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 DPH3Q96FX2 82 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 SPCS1Q9Y6A9 102 aa5.04□□□□□ -1.6
DEPDC4-207ENST00000549249 K7EP34 96 aa5.03□□□□□ -1.6
DEPDC4-207ENST00000549249 SCGB1C2P0DMR2 95 aa5.03□□□□□ -1.6
DEPDC4-207ENST00000549249 VAMP3Q15836 100 aa5.03□□□□□ -1.6
DEPDC4-207ENST00000549249 CIRBP-AS1Q8TBR5 109 aa5.03□□□□□ -1.6
DEPDC4-207ENST00000549249 DYNC1H1Q14204 4646 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-207ENST00000549249 LST1O00453 97 aa5.02□□□□□ -1.61
DEPDC4-207ENST00000549249 COX6CP09669 75 aa5.02□□□□□ -1.61
DEPDC4-207ENST00000549249 ELOF1P60002 83 aaKnown RBP5.02□□□□□ -1.61
DEPDC4-207ENST00000549249 UBE2BP63146 152 aa5.02□□□□□ -1.61
DEPDC4-207ENST00000549249 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
DEPDC4-207ENST00000549249 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
DEPDC4-207ENST00000549249 CDK2AP2O75956 126 aa5.01□□□□□ -1.61
DEPDC4-207ENST00000549249 COX7BP24311 80 aa5.01□□□□□ -1.61
DEPDC4-207ENST00000549249 REG3GQ6UW15 175 aa5.01□□□□□ -1.61
DEPDC4-207ENST00000549249 CBY1Q9Y3M2 126 aa5.01□□□□□ -1.61
DEPDC4-207ENST00000549249 LRP1BQ9NZR2 4599 aa5.01□□□□□ -1.61
DEPDC4-207ENST00000549249 TRBV20-1A0A075B6N2 111 aa5□□□□□ -1.61
DEPDC4-207ENST00000549249 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
DEPDC4-207ENST00000549249 B5MCH6 92 aa5□□□□□ -1.61
DEPDC4-207ENST00000549249 H0YGX0 51 aa5□□□□□ -1.61
DEPDC4-207ENST00000549249 H3BMG7 143 aa5□□□□□ -1.61
DEPDC4-207ENST00000549249 LINC00575Q6W349 94 aa5□□□□□ -1.61
DEPDC4-207ENST00000549249 ETDCA0A1B0GVM5 59 aa4.99□□□□□ -1.61
DEPDC4-207ENST00000549249 XGP55808 180 aa4.99□□□□□ -1.61
DEPDC4-207ENST00000549249 ATXN8Q156A1 80 aa4.99□□□□□ -1.61
DEPDC4-207ENST00000549249 Q6ZRX8 168 aa4.99□□□□□ -1.61
DEPDC4-207ENST00000549249 MTURNQ8N3F0 131 aa4.99□□□□□ -1.61
DEPDC4-207ENST00000549249 Q9BRP9 147 aa4.99□□□□□ -1.61
DEPDC4-207ENST00000549249 PRLHP81277 87 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 UBE2V1Q13404 147 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 FAM19A1Q7Z5A9 133 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
DEPDC4-207ENST00000549249 A0A1B0GX51 115 aa4.97□□□□□ -1.61
DEPDC4-207ENST00000549249 BCE1O60756 84 aa4.97□□□□□ -1.61
DEPDC4-207ENST00000549249 TRACP01848 142 aa4.97□□□□□ -1.61
DEPDC4-207ENST00000549249 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
DEPDC4-207ENST00000549249 hADV29S1A0JD25 119 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms