RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FLG2Q5D862 2391 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-216ENST00000548379 A0A096LNI7 61 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 GVQW2A0A096LPI5 108 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-216ENST00000548379 BORCS7-ASMTA0A0B4J1R7 106 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 IGHV1-58A0A0C4DH39 117 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 LOC107984640A0A0U1RRK4 108 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 TSTD3H0UI37 97 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 PFDN1O60925 122 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 CXCL1P09341 107 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 TRGC1P0CF51 173 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 SS18Q15532 418 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 EIF5AL1Q6IS14 154 aaKnown RBP1.72□□□□□ -2.13
PTCH1-216ENST00000548379 KRTAP26-1Q6PEX3 210 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 OR10AG1Q8NH19 301 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 PLEKHB2Q96CS7 222 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 NAT8Q9UHE5 227 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
PTCH1-216ENST00000548379 MUC21A0A0G2JKD1 596 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 MUC21A0A140T8X8 626 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 CTXND1A0A1B0GTU2 59 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 F2Z2F3 143 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 M0QY20 66 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 NCR2O95944 276 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 ZNF25P17030 456 aaPredicted RBP1.71□□□□□ -2.14
PTCH1-216ENST00000548379 CRIP1P50238 77 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 LINC01554Q52M75 96 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 LYZL1Q6UWQ5 148 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 KTN1-AS1Q86SY8 53 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 BAGE2Q86Y30 109 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 Q8NDZ9 215 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 NUP35Q8NFH5 326 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 OR5A1Q8NGJ0 315 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 S100ZQ8WXG8 99 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 NIT2Q9NQR4 276 aa1.71□□□□□ -2.14
PTCH1-216ENST00000548379 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 C1orf196B1AJZ1 125 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 CCL25O15444 150 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 UBE2BP63146 152 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 C9orf116Q5BN46 136 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-216ENST00000548379 TEX261Q6UWH6 196 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 SCGB3A1Q96QR1 104 aa1.7□□□□□ -2.14
PTCH1-216ENST00000548379 LRP1Q07954 4544 aaKnown RBP1.69□□□□□ -2.14
PTCH1-216ENST00000548379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-216ENST00000548379 LINC00959A0A1B0GUT2 108 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 IGKV2-29A2NJV5 120 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-216ENST00000548379 H7C2G1 150 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 I3L3M4 83 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 TAX1BP3O14907 124 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 PPBPP02775 128 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 BCL2P10415 239 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 LINC00299Q6ZSB3 139 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 PHF5AQ7RTV0 110 aaKnown RBP1.69□□□□□ -2.14
PTCH1-216ENST00000548379 HIST3H2BBQ8N257 126 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 SFT2D1Q8WV19 159 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 OSTCQ9NRP0 149 aa1.69□□□□□ -2.14
PTCH1-216ENST00000548379 FXYD6-FXYD2A0A087WZ82 144 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 UMAD1C9J7I0 102 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 FCER1GP30273 86 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 RPL35P42766 123 aaKnown RBP1.68□□□□□ -2.14
PTCH1-216ENST00000548379 GNG4P50150 75 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 FXYD2P54710 66 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 SPAG11BQ08648 103 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 RPL7L1Q6DKI1 246 aaKnown RBP1.68□□□□□ -2.14
PTCH1-216ENST00000548379 KCNRGQ8N5I3 272 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 LINC00526Q96FQ7 95 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 ST20Q9HBF5 79 aa1.68□□□□□ -2.14
PTCH1-216ENST00000548379 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 TRAV13-1A0A0B4J241 112 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 TRBV10-2A0A0K0K1G8 114 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 C7orf77A4D0Y5 90 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 M0R378 163 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 NDUFA1O15239 70 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 PPP1R17O96001 155 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 IGLC6P0CF74 106 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 SCGB1A1P11684 91 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 CRYGAP11844 174 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 C9orf62Q8N4C0 152 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 FAM213BQ8TBF2 198 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 Q9BRP9 147 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 MANBALQ9NQG1 85 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 CDC42SE2Q9NRR3 84 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 MRPL35Q9NZE8 188 aaKnown RBP1.67□□□□□ -2.14
PTCH1-216ENST00000548379 GNG13Q9P2W3 67 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 LAMTOR3Q9UHA4 124 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 DNAH8Q96JB1 4490 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 LRP2P98164 4655 aa1.67□□□□□ -2.14
PTCH1-216ENST00000548379 ARPC5O15511 151 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 NUPR1O60356 82 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 TCL1BO95988 128 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 TRGC2P03986 189 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 S100A12P80511 92 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 C5orf38Q86SI9 138 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 MBD3L1Q8WWY6 194 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 RPL39LQ96EH5 51 aaKnown RBP1.66□□□□□ -2.14
PTCH1-216ENST00000548379 HIST1H2BLQ99880 126 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 MED9Q9NWA0 146 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 TMEM242Q9NWH2 141 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms