RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 Q6ZRP5 223 aa3.98□□□□□ -1.77
PTPRR-207ENST00000548220 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
PTPRR-207ENST00000548220 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
PTPRR-207ENST00000548220 PKHD1P08F94 4074 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 PFN2P35080 140 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 NPC2P61916 151 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 ETDBQ3ZM63 59 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 C9orf116Q5BN46 136 aaPredicted RBP3.97□□□□□ -1.77
PTPRR-207ENST00000548220 LINC00308Q8TCZ7 52 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 SPACA4Q8TDM5 124 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 PLAC8Q9NZF1 115 aa3.97□□□□□ -1.77
PTPRR-207ENST00000548220 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 H7C2G1 150 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 M0QXV9 152 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 COX6CP09669 75 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 FUSP35637 526 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTPRR-207ENST00000548220 RPL13AP40429 203 aaKnown RBP3.96□□□□□ -1.78
PTPRR-207ENST00000548220 ATXN8Q156A1 80 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 MTURNQ8N3F0 131 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 DAND5Q8N907 189 aa3.96□□□□□ -1.78
PTPRR-207ENST00000548220 A0A096LNI7 61 aa3.95□□□□□ -1.78
PTPRR-207ENST00000548220 RPL18AQ02543 176 aaKnown RBP3.95□□□□□ -1.78
PTPRR-207ENST00000548220 LINC01620Q4KN68 170 aa3.95□□□□□ -1.78
PTPRR-207ENST00000548220 SOSTDC1Q6X4U4 206 aa3.95□□□□□ -1.78
PTPRR-207ENST00000548220 LINC01600Q96MT4 127 aa3.95□□□□□ -1.78
PTPRR-207ENST00000548220 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
PTPRR-207ENST00000548220 TRAV13-2A0A0B4J235 113 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 C9JAW5 83 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 M0R378 163 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 PRYO14603 147 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 SLC25A20O43772 301 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 VPREB1P12018 145 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 GAGE2BQ13066 116 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 GAGE2EQ4V326 116 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 C9orf129Q5T035 196 aaKnown RBP3.94□□□□□ -1.78
PTPRR-207ENST00000548220 TEN1Q86WV5 123 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 PPDPFLQ8WWR9 84 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 TMEM126AQ9H061 195 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 GAGE2DQ9UEU5 116 aa3.94□□□□□ -1.78
PTPRR-207ENST00000548220 ANKRD29Q8N6D5 301 aa3.93□□□□□ -1.78
PTPRR-207ENST00000548220 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
PTPRR-207ENST00000548220 XAGE1AQ9HD64 81 aa3.93□□□□□ -1.78
PTPRR-207ENST00000548220 A0A087WYN8 130 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 H3BT86 120 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 LST1O00453 97 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 IGLV6-57P01721 117 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 KRTAP10-1P60331 282 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 MRPL55Q7Z7F7 128 aaKnown RBP3.92□□□□□ -1.78
PTPRR-207ENST00000548220 DPH3Q96FX2 82 aa3.92□□□□□ -1.78
PTPRR-207ENST00000548220 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
PTPRR-207ENST00000548220 CIRBP-AS1Q8TBR5 109 aa3.91□□□□□ -1.78
PTPRR-207ENST00000548220 CLEC2BQ92478 149 aa3.91□□□□□ -1.78
PTPRR-207ENST00000548220 KCNQ1DNQ9H478 68 aa3.91□□□□□ -1.78
PTPRR-207ENST00000548220 C22orf24Q9Y442 160 aa3.91□□□□□ -1.78
PTPRR-207ENST00000548220 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 IGKV2-28A0A075B6P5 120 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 A0A1W2PNN7 141 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 H0Y9J4 135 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 IGKV2D-28P01615 120 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 C7orf33Q8WU49 177 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 SIGMAR1Q99720 223 aa3.9□□□□□ -1.78
PTPRR-207ENST00000548220 TRACP01848 142 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 CHTF8P0CG12 524 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
PTPRR-207ENST00000548220 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 SCXQ7RTU7 201 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 LINC00167Q96N53 147 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 SRRM2Q9UQ35 2752 aaKnown RBP3.89□□□□□ -1.79
PTPRR-207ENST00000548220 PANO1I0J062 215 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 INAFM2P0DMQ5 153 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 SCGB1A1P11684 91 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 SPRR1AP35321 89 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 XGP55808 180 aa3.89□□□□□ -1.79
PTPRR-207ENST00000548220 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
PTPRR-207ENST00000548220 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
PTPRR-207ENST00000548220 H0YGX0 51 aa3.88□□□□□ -1.79
PTPRR-207ENST00000548220 FAM19A5Q7Z5A7 132 aaPredicted RBP3.88□□□□□ -1.79
PTPRR-207ENST00000548220 Q8NDZ9 215 aa3.88□□□□□ -1.79
PTPRR-207ENST00000548220 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
PTPRR-207ENST00000548220 TRBV10-3A0A0K0K1G6 114 aa3.87□□□□□ -1.79
PTPRR-207ENST00000548220 KRTAP4-16G5E9R7 235 aaPredicted RBP3.87□□□□□ -1.79
PTPRR-207ENST00000548220 SNCGO76070 127 aa3.87□□□□□ -1.79
PTPRR-207ENST00000548220 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
PTPRR-207ENST00000548220 REG3GQ6UW15 175 aa3.87□□□□□ -1.79
PTPRR-207ENST00000548220 OR13C6PQ8NH95 151 aa3.87□□□□□ -1.79
PTPRR-207ENST00000548220 SMIM11BQ8TCY0 68 aa3.87□□□□□ -1.79
PTPRR-207ENST00000548220 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
PTPRR-207ENST00000548220 TRAV23DV6A0A075B6W5 121 aa3.86□□□□□ -1.79
PTPRR-207ENST00000548220 TEX49A0A1B0GTD5 131 aa3.86□□□□□ -1.79
PTPRR-207ENST00000548220 A0A1B0GX51 115 aa3.86□□□□□ -1.79
PTPRR-207ENST00000548220 ZNF73O43830 326 aaPredicted RBP3.86□□□□□ -1.79
PTPRR-207ENST00000548220 BCE1O60756 84 aa3.86□□□□□ -1.79
PTPRR-207ENST00000548220 UBE2BP63146 152 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms