RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 SPINK1P00995 79 aa12.06□□□□□ -0.48
USP44-204ENST00000547951 ST20-AS1Q8NBB2 130 aa12.04□□□□□ -0.48
USP44-204ENST00000547951 LITAFQ99732 161 aa12.04□□□□□ -0.48
USP44-204ENST00000547951 SYS1-DBNDD2H3BUS1 97 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
USP44-204ENST00000547951 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
USP44-204ENST00000547951 Q8N377 158 aa12.02□□□□□ -0.49
USP44-204ENST00000547951 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
USP44-204ENST00000547951 LINC00308Q8TCZ7 52 aa11.99□□□□□ -0.49
USP44-204ENST00000547951 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
USP44-204ENST00000547951 LINC01545Q5VT33 79 aa11.98□□□□□ -0.49
USP44-204ENST00000547951 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
USP44-204ENST00000547951 C9orf153Q5TBE3 101 aa11.96□□□□□ -0.49
USP44-204ENST00000547951 KRTAP9-2Q9BYQ4 174 aa11.96□□□□□ -0.49
USP44-204ENST00000547951 KRTAP4-1Q9BYQ7 146 aa11.96□□□□□ -0.49
USP44-204ENST00000547951 RPS29P62273 56 aaKnown RBP11.94□□□□□ -0.5
USP44-204ENST00000547951 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
USP44-204ENST00000547951 ZNF815PA8K554 130 aa11.93□□□□□ -0.5
USP44-204ENST00000547951 TIMM17BO60830 172 aa11.93□□□□□ -0.5
USP44-204ENST00000547951 ASB16-AS1Q495Z4 193 aa11.93□□□□□ -0.5
USP44-204ENST00000547951 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
USP44-204ENST00000547951 PET117Q6UWS5 81 aa11.92□□□□□ -0.5
USP44-204ENST00000547951 SLC25A20O43772 301 aa11.91□□□□□ -0.5
USP44-204ENST00000547951 C3orf79P0CE67 100 aa11.91□□□□□ -0.5
USP44-204ENST00000547951 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
USP44-204ENST00000547951 SPRR1BP22528 89 aa11.86□□□□□ -0.51
USP44-204ENST00000547951 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
USP44-204ENST00000547951 KRTDAPP60985 99 aa11.85□□□□□ -0.51
USP44-204ENST00000547951 C5orf52A6NGY3 159 aa11.84□□□□□ -0.51
USP44-204ENST00000547951 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
USP44-204ENST00000547951 HRCT1Q6UXD1 115 aa11.84□□□□□ -0.51
USP44-204ENST00000547951 CBY1Q9Y3M2 126 aa11.84□□□□□ -0.51
USP44-204ENST00000547951 ELOF1P60002 83 aaKnown RBP11.83□□□□□ -0.52
USP44-204ENST00000547951 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
USP44-204ENST00000547951 COX7BP24311 80 aa11.82□□□□□ -0.52
USP44-204ENST00000547951 SEC61BP60468 96 aaKnown RBP11.82□□□□□ -0.52
USP44-204ENST00000547951 ANKRD39Q53RE8 183 aa11.82□□□□□ -0.52
USP44-204ENST00000547951 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
USP44-204ENST00000547951 XP32Q5T750 250 aa11.82□□□□□ -0.52
USP44-204ENST00000547951 ATOH7Q8N100 152 aa11.8□□□□□ -0.52
USP44-204ENST00000547951 Q1RN00 199 aa11.78□□□□□ -0.52
USP44-204ENST00000547951 LINC00518Q8N0U6 118 aa11.78□□□□□ -0.52
USP44-204ENST00000547951 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
USP44-204ENST00000547951 SCGB1D4Q6XE38 83 aa11.77□□□□□ -0.53
USP44-204ENST00000547951 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
USP44-204ENST00000547951 LAMTOR3Q9UHA4 124 aa11.76□□□□□ -0.53
USP44-204ENST00000547951 SLC25A34Q6PIV7 304 aa11.75□□□□□ -0.53
USP44-204ENST00000547951 TAL2Q16559 108 aa11.74□□□□□ -0.53
USP44-204ENST00000547951 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
USP44-204ENST00000547951 SMIM29Q86T20 159 aa11.72□□□□□ -0.53
USP44-204ENST00000547951 MUSTN1Q8IVN3 82 aa11.72□□□□□ -0.53
USP44-204ENST00000547951 LINC01547P58512 204 aaPredicted RBP11.71□□□□□ -0.53
USP44-204ENST00000547951 LIMD2Q9BT23 127 aa11.71□□□□□ -0.53
USP44-204ENST00000547951 C20orf202A1L168 122 aa11.7□□□□□ -0.54
USP44-204ENST00000547951 A6NDN8 102 aa11.7□□□□□ -0.54
USP44-204ENST00000547951 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
USP44-204ENST00000547951 H7C2G1 150 aa11.7□□□□□ -0.54
USP44-204ENST00000547951 TRBV7-6A0A0J9YX20 115 aa11.69□□□□□ -0.54
USP44-204ENST00000547951 TEX49A0A1B0GTD5 131 aa11.69□□□□□ -0.54
USP44-204ENST00000547951 IFITM1P13164 125 aa11.69□□□□□ -0.54
USP44-204ENST00000547951 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
USP44-204ENST00000547951 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
USP44-204ENST00000547951 IGLV5-48A0A075B6I7 105 aa11.65□□□□□ -0.54
USP44-204ENST00000547951 LCE2CQ5TA81 110 aa11.65□□□□□ -0.54
USP44-204ENST00000547951 CD164Q04900 197 aa11.64□□□□□ -0.55
USP44-204ENST00000547951 PCOTHQ58A44 107 aa11.64□□□□□ -0.55
USP44-204ENST00000547951 Q6ZVH6 145 aa11.64□□□□□ -0.55
USP44-204ENST00000547951 SMIM11BQ8TCY0 68 aa11.64□□□□□ -0.55
USP44-204ENST00000547951 COPS9Q8WXC6 57 aa11.64□□□□□ -0.55
USP44-204ENST00000547951 KRTAP19-2Q3LHN2 52 aa11.62□□□□□ -0.55
USP44-204ENST00000547951 AKR1D1P51857 326 aa11.6□□□□□ -0.55
USP44-204ENST00000547951 C1orf195Q5TG92 126 aa11.59□□□□□ -0.55
USP44-204ENST00000547951 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
USP44-204ENST00000547951 KRTAP9-6A0A140TA67 174 aa11.58□□□□□ -0.56
USP44-204ENST00000547951 Q5XG85 94 aa11.57□□□□□ -0.56
USP44-204ENST00000547951 HIST3H2BBQ8N257 126 aa11.57□□□□□ -0.56
USP44-204ENST00000547951 IGLV8-61A0A075B6I0 122 aa11.56□□□□□ -0.56
USP44-204ENST00000547951 HIST1H2BLQ99880 126 aa11.56□□□□□ -0.56
USP44-204ENST00000547951 A4D1N5 150 aa11.55□□□□□ -0.56
USP44-204ENST00000547951 SNRPEP62304 92 aaKnown RBP11.52□□□□□ -0.57
USP44-204ENST00000547951 NHP2Q9NX24 153 aaKnown RBP11.51□□□□□ -0.57
USP44-204ENST00000547951 LINC00575Q6W349 94 aa11.5□□□□□ -0.57
USP44-204ENST00000547951 MT1HP80294 61 aa11.48□□□□□ -0.57
USP44-204ENST00000547951 S100A2P29034 98 aa11.47□□□□□ -0.57
USP44-204ENST00000547951 Q6ZQY7 126 aa11.46□□□□□ -0.57
USP44-204ENST00000547951 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
USP44-204ENST00000547951 C12orf57Q99622 126 aa11.45□□□□□ -0.58
USP44-204ENST00000547951 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
USP44-204ENST00000547951 VAMP3Q15836 100 aa11.44□□□□□ -0.58
USP44-204ENST00000547951 hADV29S1A0JD25 119 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms