RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NPC2P61916 151 aa7.5□□□□□ -1.21
CPSF6-204ENST00000547486 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
CPSF6-204ENST00000547486 MIEN1Q9BRT3 115 aa7.5□□□□□ -1.21
CPSF6-204ENST00000547486 SSBP3-AS1Q7Z2R9 100 aa7.49□□□□□ -1.21
CPSF6-204ENST00000547486 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
CPSF6-204ENST00000547486 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
CPSF6-204ENST00000547486 E9PLD3 99 aa7.48□□□□□ -1.21
CPSF6-204ENST00000547486 Q8N377 158 aa7.48□□□□□ -1.21
CPSF6-204ENST00000547486 ZNF73O43830 326 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-204ENST00000547486 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
CPSF6-204ENST00000547486 LITAFQ99732 161 aa7.46□□□□□ -1.22
CPSF6-204ENST00000547486 SYS1-DBNDD2H3BUS1 97 aa7.45□□□□□ -1.22
CPSF6-204ENST00000547486 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
CPSF6-204ENST00000547486 JOSD1Q15040 202 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-204ENST00000547486 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
CPSF6-204ENST00000547486 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BKO60814 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BJP06899 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BOP23527 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BBP33778 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BDP58876 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BCP62807 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST2H2BEQ16778 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-204ENST00000547486 LINC00308Q8TCZ7 52 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BHQ93079 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BNQ99877 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 HIST1H2BMQ99879 126 aa7.44□□□□□ -1.22
CPSF6-204ENST00000547486 SLC25A20O43772 301 aa7.42□□□□□ -1.22
CPSF6-204ENST00000547486 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
CPSF6-204ENST00000547486 LINC01545Q5VT33 79 aa7.42□□□□□ -1.22
CPSF6-204ENST00000547486 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
CPSF6-204ENST00000547486 SPANXCQ9NY87 97 aa7.41□□□□□ -1.22
CPSF6-204ENST00000547486 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
CPSF6-204ENST00000547486 TIMM17BO60830 172 aa7.4□□□□□ -1.22
CPSF6-204ENST00000547486 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
CPSF6-204ENST00000547486 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.22
CPSF6-204ENST00000547486 C5orf52A6NGY3 159 aa7.39□□□□□ -1.23
CPSF6-204ENST00000547486 HINT1P49773 126 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-204ENST00000547486 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
CPSF6-204ENST00000547486 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
CPSF6-204ENST00000547486 SPRR1BP22528 89 aa7.38□□□□□ -1.23
CPSF6-204ENST00000547486 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
CPSF6-204ENST00000547486 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
CPSF6-204ENST00000547486 XP32Q5T750 250 aa7.37□□□□□ -1.23
CPSF6-204ENST00000547486 CBY1Q9Y3M2 126 aa7.37□□□□□ -1.23
CPSF6-204ENST00000547486 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
CPSF6-204ENST00000547486 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
CPSF6-204ENST00000547486 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
CPSF6-204ENST00000547486 HRCT1Q6UXD1 115 aa7.35□□□□□ -1.23
CPSF6-204ENST00000547486 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
CPSF6-204ENST00000547486 COX7BP24311 80 aa7.33□□□□□ -1.24
CPSF6-204ENST00000547486 LINC00518Q8N0U6 118 aa7.33□□□□□ -1.24
CPSF6-204ENST00000547486 KRTDAPP60985 99 aa7.32□□□□□ -1.24
CPSF6-204ENST00000547486 COA6Q5JTJ3 125 aaKnown RBP7.32□□□□□ -1.24
CPSF6-204ENST00000547486 DEFB105AQ8NG35 78 aa7.32□□□□□ -1.24
CPSF6-204ENST00000547486 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
CPSF6-204ENST00000547486 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
CPSF6-204ENST00000547486 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
CPSF6-204ENST00000547486 SLC25A34Q6PIV7 304 aa7.31□□□□□ -1.24
CPSF6-204ENST00000547486 TAL2Q16559 108 aa7.3□□□□□ -1.24
CPSF6-204ENST00000547486 Q1RN00 199 aa7.3□□□□□ -1.24
CPSF6-204ENST00000547486 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
CPSF6-204ENST00000547486 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
CPSF6-204ENST00000547486 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
CPSF6-204ENST00000547486 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
CPSF6-204ENST00000547486 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
CPSF6-204ENST00000547486 ATOH7Q8N100 152 aa7.28□□□□□ -1.24
CPSF6-204ENST00000547486 LIMD2Q9BT23 127 aa7.28□□□□□ -1.24
CPSF6-204ENST00000547486 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
CPSF6-204ENST00000547486 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
CPSF6-204ENST00000547486 C9orf92A6NGG3 77 aa7.27□□□□□ -1.25
CPSF6-204ENST00000547486 PCP2Q8IVA1 136 aa7.27□□□□□ -1.25
CPSF6-204ENST00000547486 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
CPSF6-204ENST00000547486 A6NDN8 102 aa7.26□□□□□ -1.25
CPSF6-204ENST00000547486 H7C2G1 150 aa7.26□□□□□ -1.25
CPSF6-204ENST00000547486 IFITM1P13164 125 aa7.26□□□□□ -1.25
CPSF6-204ENST00000547486 CD164Q04900 197 aa7.26□□□□□ -1.25
CPSF6-204ENST00000547486 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
CPSF6-204ENST00000547486 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
CPSF6-204ENST00000547486 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
CPSF6-204ENST00000547486 PCOTHQ58A44 107 aa7.25□□□□□ -1.25
CPSF6-204ENST00000547486 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
CPSF6-204ENST00000547486 C20orf202A1L168 122 aa7.24□□□□□ -1.25
CPSF6-204ENST00000547486 AKR1D1P51857 326 aa7.23□□□□□ -1.25
CPSF6-204ENST00000547486 Q6ZVH6 145 aa7.23□□□□□ -1.25
CPSF6-204ENST00000547486 C1orf195Q5TG92 126 aa7.22□□□□□ -1.25
CPSF6-204ENST00000547486 SMIM11BQ8TCY0 68 aa7.22□□□□□ -1.25
CPSF6-204ENST00000547486 COPS9Q8WXC6 57 aa7.22□□□□□ -1.25
CPSF6-204ENST00000547486 IGLV8-61A0A075B6I0 122 aa7.21□□□□□ -1.26
CPSF6-204ENST00000547486 Q5XG85 94 aa7.21□□□□□ -1.26
CPSF6-204ENST00000547486 A4D1N5 150 aa7.19□□□□□ -1.26
CPSF6-204ENST00000547486 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
CPSF6-204ENST00000547486 MT1HP80294 61 aa7.17□□□□□ -1.26
CPSF6-204ENST00000547486 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-204ENST00000547486 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
CPSF6-204ENST00000547486 NHP2Q9NX24 153 aaKnown RBP7.15□□□□□ -1.26
CPSF6-204ENST00000547486 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.27
CPSF6-204ENST00000547486 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
CPSF6-204ENST00000547486 HIST3H2BBQ8N257 126 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms