RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 A6NDN8 102 aa14.11□□□□□ -0.15
SMARCD1-203ENST00000547247 TRAV13-2A0A0B4J235 113 aa14.1□□□□□ -0.15
SMARCD1-203ENST00000547247 PRO1933Q9H354 126 aa14.1□□□□□ -0.15
SMARCD1-203ENST00000547247 DIRC1Q969H9 104 aa14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 C12orf57Q99622 126 aa14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 FLG2Q5D862 2391 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 ETDCA0A1B0GVM5 59 aa14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 PRLHP81277 87 aa14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 KRTAP13-1Q8IUC0 172 aa14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 CEND1Q8N111 149 aa14.09□□□□□ -0.15
SMARCD1-203ENST00000547247 KRTAP4-16G5E9R7 235 aaPredicted RBP14.08□□□□□ -0.16
SMARCD1-203ENST00000547247 ZNF73O43830 326 aaPredicted RBP14.07□□□□□ -0.16
SMARCD1-203ENST00000547247 MYCBP2O75592 4640 aa14.06□□□□□ -0.16
SMARCD1-203ENST00000547247 H0Y9J4 135 aa14.05□□□□□ -0.16
SMARCD1-203ENST00000547247 HSD52Q0P140 79 aa14.05□□□□□ -0.16
SMARCD1-203ENST00000547247 TMEM238LA0A1B0GVL6 79 aa14.02□□□□□ -0.16
SMARCD1-203ENST00000547247 A6NJY4 79 aa14.02□□□□□ -0.16
SMARCD1-203ENST00000547247 B5MCH6 92 aa14.02□□□□□ -0.16
SMARCD1-203ENST00000547247 HINT1P49773 126 aaPredicted RBP14.02□□□□□ -0.16
SMARCD1-203ENST00000547247 FXYD2P54710 66 aa14□□□□□ -0.17
SMARCD1-203ENST00000547247 HIGD2AQ9BW72 106 aa14□□□□□ -0.17
SMARCD1-203ENST00000547247 CFC1BP0CG36 223 aa14□□□□□ -0.17
SMARCD1-203ENST00000547247 CFC1P0CG37 223 aa14□□□□□ -0.17
SMARCD1-203ENST00000547247 TSTD3H0UI37 97 aa13.99□□□□□ -0.17
SMARCD1-203ENST00000547247 C6orf99Q4VX62 202 aa13.99□□□□□ -0.17
SMARCD1-203ENST00000547247 Q6ZRX8 168 aa13.99□□□□□ -0.17
SMARCD1-203ENST00000547247 RAB37Q96AX2 223 aa13.98□□□□□ -0.17
SMARCD1-203ENST00000547247 A0A0B4J2C4 111 aa13.97□□□□□ -0.17
SMARCD1-203ENST00000547247 RPL13AP40429 203 aaKnown RBP13.97□□□□□ -0.17
SMARCD1-203ENST00000547247 SMIM11BQ8TCY0 68 aa13.97□□□□□ -0.17
SMARCD1-203ENST00000547247 OXTP01178 125 aa13.95□□□□□ -0.18
SMARCD1-203ENST00000547247 LRP1Q07954 4544 aaKnown RBP13.94□□□□□ -0.18
SMARCD1-203ENST00000547247 TRBV7-6A0A0J9YX20 115 aa13.93□□□□□ -0.18
SMARCD1-203ENST00000547247 SMCR5Q8TEV8 140 aa13.93□□□□□ -0.18
SMARCD1-203ENST00000547247 Q9BRP9 147 aa13.93□□□□□ -0.18
SMARCD1-203ENST00000547247 KRTAP29-1A8MX34 341 aaPredicted RBP13.92□□□□□ -0.18
SMARCD1-203ENST00000547247 COX7BP24311 80 aa13.92□□□□□ -0.18
SMARCD1-203ENST00000547247 ELOF1P60002 83 aaKnown RBP13.92□□□□□ -0.18
SMARCD1-203ENST00000547247 FAT3Q8TDW7 4589 aa13.92□□□□□ -0.18
SMARCD1-203ENST00000547247 KRTAP1-4P0C5Y4 121 aa13.91□□□□□ -0.18
SMARCD1-203ENST00000547247 CTAG1AP78358 180 aa13.91□□□□□ -0.18
SMARCD1-203ENST00000547247 NHP2Q9NX24 153 aaKnown RBP13.91□□□□□ -0.18
SMARCD1-203ENST00000547247 A0A1B0GWB2 263 aa13.9□□□□□ -0.18
SMARCD1-203ENST00000547247 LINC01600Q96MT4 127 aa13.9□□□□□ -0.18
SMARCD1-203ENST00000547247 PRO1854Q9UHT4 67 aa13.9□□□□□ -0.18
SMARCD1-203ENST00000547247 H7C2G1 150 aa13.89□□□□□ -0.19
SMARCD1-203ENST00000547247 BVES-AS1Q5T3Y7 98 aa13.89□□□□□ -0.19
SMARCD1-203ENST00000547247 J3QL48 77 aa13.88□□□□□ -0.19
SMARCD1-203ENST00000547247 VAMP3Q15836 100 aa13.88□□□□□ -0.19
SMARCD1-203ENST00000547247 DHRS4-AS1Q9P1J3 65 aa13.88□□□□□ -0.19
SMARCD1-203ENST00000547247 ERC2-IT1O76042 136 aa13.87□□□□□ -0.19
SMARCD1-203ENST00000547247 ZNF706Q9Y5V0 76 aaPredicted RBP13.87□□□□□ -0.19
SMARCD1-203ENST00000547247 M0R143 59 aa13.84□□□□□ -0.19
SMARCD1-203ENST00000547247 Q1RN00 199 aa13.84□□□□□ -0.19
SMARCD1-203ENST00000547247 DMBT1Q9UGM3 2413 aaPredicted RBP13.84□□□□□ -0.19
SMARCD1-203ENST00000547247 SPRR4Q96PI1 79 aa13.83□□□□□ -0.19
SMARCD1-203ENST00000547247 K7ERJ3 54 aa13.82□□□□□ -0.2
SMARCD1-203ENST00000547247 ANAPC11Q9NYG5 84 aa13.81□□□□□ -0.2
SMARCD1-203ENST00000547247 PRR26Q8N8Z3 221 aa13.8□□□□□ -0.2
SMARCD1-203ENST00000547247 MT1HL1P0DM35 61 aa13.79□□□□□ -0.2
SMARCD1-203ENST00000547247 FAM229BQ4G0N7 80 aa13.78□□□□□ -0.2
SMARCD1-203ENST00000547247 SLC25A20O43772 301 aa13.77□□□□□ -0.21
SMARCD1-203ENST00000547247 CRYGAP11844 174 aa13.77□□□□□ -0.21
SMARCD1-203ENST00000547247 KRTAP10-8P60410 259 aa13.77□□□□□ -0.21
SMARCD1-203ENST00000547247 GAGE2AQ6NT46 116 aa13.77□□□□□ -0.21
SMARCD1-203ENST00000547247 LINC00575Q6W349 94 aa13.76□□□□□ -0.21
SMARCD1-203ENST00000547247 HERC1Q15751 4861 aa13.76□□□□□ -0.21
SMARCD1-203ENST00000547247 A0A087X002 238 aa13.75□□□□□ -0.21
SMARCD1-203ENST00000547247 ST20-AS1Q8NBB2 130 aa13.75□□□□□ -0.21
SMARCD1-203ENST00000547247 H0YGX0 51 aa13.74□□□□□ -0.21
SMARCD1-203ENST00000547247 LINC00483Q53H64 154 aa13.74□□□□□ -0.21
SMARCD1-203ENST00000547247 TSPAN13O95857 204 aa13.73□□□□□ -0.21
SMARCD1-203ENST00000547247 TNXBP22105 4242 aa13.73□□□□□ -0.21
SMARCD1-203ENST00000547247 hADV29S1A0JD25 119 aa13.71□□□□□ -0.21
SMARCD1-203ENST00000547247 TRIAP1O43715 76 aa13.71□□□□□ -0.21
SMARCD1-203ENST00000547247 PSMB2P49721 201 aa13.71□□□□□ -0.22
SMARCD1-203ENST00000547247 BATFQ16520 125 aa13.68□□□□□ -0.22
SMARCD1-203ENST00000547247 KRTAP13-2Q52LG2 175 aa13.68□□□□□ -0.22
SMARCD1-203ENST00000547247 TYMSOSQ8TAI1 123 aa13.68□□□□□ -0.22
SMARCD1-203ENST00000547247 COX6CP09669 75 aa13.67□□□□□ -0.22
SMARCD1-203ENST00000547247 SNCGO76070 127 aa13.66□□□□□ -0.22
SMARCD1-203ENST00000547247 DEFB105AQ8NG35 78 aa13.66□□□□□ -0.22
SMARCD1-203ENST00000547247 SPRR1BP22528 89 aa13.66□□□□□ -0.22
SMARCD1-203ENST00000547247 C3orf22Q8N5N4 141 aa13.65□□□□□ -0.22
SMARCD1-203ENST00000547247 IGLV5-48A0A075B6I7 105 aa13.64□□□□□ -0.23
SMARCD1-203ENST00000547247 TEX49A0A1B0GTD5 131 aa13.64□□□□□ -0.23
SMARCD1-203ENST00000547247 Q6ZQY7 126 aa13.64□□□□□ -0.23
SMARCD1-203ENST00000547247 FAM218AQ96MZ4 157 aa13.64□□□□□ -0.23
SMARCD1-203ENST00000547247 LINC01547P58512 204 aaPredicted RBP13.62□□□□□ -0.23
SMARCD1-203ENST00000547247 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.62□□□□□ -0.23
SMARCD1-203ENST00000547247 A0A1B0GX51 115 aa13.61□□□□□ -0.23
SMARCD1-203ENST00000547247 CLEC2BQ92478 149 aa13.6□□□□□ -0.23
SMARCD1-203ENST00000547247 IGLV9-49A0A0B4J1Y8 123 aa13.59□□□□□ -0.23
SMARCD1-203ENST00000547247 SCGB1C2P0DMR2 95 aa13.59□□□□□ -0.23
SMARCD1-203ENST00000547247 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
SMARCD1-203ENST00000547247 Q8N377 158 aa13.58□□□□□ -0.23
SMARCD1-203ENST00000547247 MOBPQ13875 183 aa13.56□□□□□ -0.24
SMARCD1-203ENST00000547247 PCP4L1A6NKN8 68 aa13.54□□□□□ -0.24
SMARCD1-203ENST00000547247 OCIAD2Q56VL3 154 aa13.54□□□□□ -0.24
SMARCD1-203ENST00000547247 C9orf153Q5TBE3 101 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms