RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ATOH7Q8N100 152 aa15.29■□□□□ 0.04
SRSF9-202ENST00000546942 PPDPFQ9H3Y8 114 aa15.29■□□□□ 0.04
SRSF9-202ENST00000546942 NPC2P61916 151 aa15.28■□□□□ 0.04
SRSF9-202ENST00000546942 C5orf52A6NGY3 159 aa15.27■□□□□ 0.04
SRSF9-202ENST00000546942 SOSTDC1Q6X4U4 206 aa15.27■□□□□ 0.04
SRSF9-202ENST00000546942 SCGB1D4Q6XE38 83 aa15.26■□□□□ 0.03
SRSF9-202ENST00000546942 LINC00308Q8TCZ7 52 aa15.26■□□□□ 0.03
SRSF9-202ENST00000546942 TTTY13Q9BZ97 58 aa15.26■□□□□ 0.03
SRSF9-202ENST00000546942 SPANXCQ9NY87 97 aa15.25■□□□□ 0.03
SRSF9-202ENST00000546942 B5MCH6 92 aa15.24■□□□□ 0.03
SRSF9-202ENST00000546942 S100A7L2Q5SY68 101 aa15.24■□□□□ 0.03
SRSF9-202ENST00000546942 CBY1Q9Y3M2 126 aa15.24■□□□□ 0.03
SRSF9-202ENST00000546942 HSBP1L1C9JCN9 74 aa15.23■□□□□ 0.03
SRSF9-202ENST00000546942 COPS9Q8WXC6 57 aa15.23■□□□□ 0.03
SRSF9-202ENST00000546942 IGLV6-57P01721 117 aa15.22■□□□□ 0.03
SRSF9-202ENST00000546942 Q6ZVH6 145 aa15.22■□□□□ 0.03
SRSF9-202ENST00000546942 EIF4EBP3O60516 100 aaPredicted RBP15.21■□□□□ 0.03
SRSF9-202ENST00000546942 SPANXDQ9BXN6 97 aa15.21■□□□□ 0.03
SRSF9-202ENST00000546942 GAGE2AQ6NT46 116 aa15.2■□□□□ 0.02
SRSF9-202ENST00000546942 ERC2-IT1O76042 136 aa15.19■□□□□ 0.02
SRSF9-202ENST00000546942 C4orf48Q5BLP8 95 aa15.19■□□□□ 0.02
SRSF9-202ENST00000546942 IFITM1P13164 125 aa15.18■□□□□ 0.02
SRSF9-202ENST00000546942 PCP2Q8IVA1 136 aa15.18■□□□□ 0.02
SRSF9-202ENST00000546942 LINC00518Q8N0U6 118 aa15.18■□□□□ 0.02
SRSF9-202ENST00000546942 Q8NBF4 154 aa15.18■□□□□ 0.02
SRSF9-202ENST00000546942 SPAG11AQ6PDA7 123 aa15.17■□□□□ 0.02
SRSF9-202ENST00000546942 MUC2Q02817 5179 aa15.17■□□□□ 0.02
SRSF9-202ENST00000546942 IGLV7-46A0A075B6I9 117 aa15.16■□□□□ 0.02
SRSF9-202ENST00000546942 Q9BRP9 147 aa15.16■□□□□ 0.02
SRSF9-202ENST00000546942 CTAG1AP78358 180 aa15.15■□□□□ 0.02
SRSF9-202ENST00000546942 Q6ZRX8 168 aa15.15■□□□□ 0.02
SRSF9-202ENST00000546942 TRAV23DV6A0A075B6W5 121 aa15.14■□□□□ 0.01
SRSF9-202ENST00000546942 SCGB1D1O95968 90 aa15.14■□□□□ 0.01
SRSF9-202ENST00000546942 LINC00483Q53H64 154 aa15.13■□□□□ 0.01
SRSF9-202ENST00000546942 IGLV9-49A0A0B4J1Y8 123 aa15.12■□□□□ 0.01
SRSF9-202ENST00000546942 CDIP1Q9H305 208 aa15.11■□□□□ 0.01
SRSF9-202ENST00000546942 ZNF73O43830 326 aaPredicted RBP15.1■□□□□ 0.01
SRSF9-202ENST00000546942 JOSD1Q15040 202 aaPredicted RBP15.1■□□□□ 0.01
SRSF9-202ENST00000546942 OR13C6PQ8NH95 151 aa15.09■□□□□ 0.01
SRSF9-202ENST00000546942 HINT1P49773 126 aaPredicted RBP15.08■□□□□ 0
SRSF9-202ENST00000546942 MOBPQ13875 183 aa15.08■□□□□ 0
SRSF9-202ENST00000546942 TPRXLQ17RH7 258 aa15.07■□□□□ 0
SRSF9-202ENST00000546942 MUSTN1Q8IVN3 82 aa15.04■□□□□ -0
SRSF9-202ENST00000546942 SPINK1P00995 79 aa15.02■□□□□ -0
SRSF9-202ENST00000546942 ST20-AS1Q8NBB2 130 aa15.01□□□□□ -0.01
SRSF9-202ENST00000546942 SSBP3-AS1Q7Z2R9 100 aa14.99□□□□□ -0.01
SRSF9-202ENST00000546942 COX8AP10176 69 aa14.98□□□□□ -0.01
SRSF9-202ENST00000546942 C9orf153Q5TBE3 101 aa14.98□□□□□ -0.01
SRSF9-202ENST00000546942 DLEU1O43261 78 aa14.97□□□□□ -0.01
SRSF9-202ENST00000546942 FP248Q71RG6 208 aaPredicted RBP14.97□□□□□ -0.01
SRSF9-202ENST00000546942 TRAV13-2A0A0B4J235 113 aa14.96□□□□□ -0.01
SRSF9-202ENST00000546942 MUC17Q685J3 4493 aa14.95□□□□□ -0.02
SRSF9-202ENST00000546942 TRBV7-6A0A0J9YX20 115 aa14.94□□□□□ -0.02
SRSF9-202ENST00000546942 A0A0U1RQV1 116 aa14.94□□□□□ -0.02
SRSF9-202ENST00000546942 A6NDN8 102 aa14.94□□□□□ -0.02
SRSF9-202ENST00000546942 DHRS4-AS1Q9P1J3 65 aa14.94□□□□□ -0.02
SRSF9-202ENST00000546942 ELOF1P60002 83 aaKnown RBP14.91□□□□□ -0.02
SRSF9-202ENST00000546942 C6orf99Q4VX62 202 aa14.91□□□□□ -0.02
SRSF9-202ENST00000546942 VAMP8Q9BV40 100 aa14.91□□□□□ -0.02
SRSF9-202ENST00000546942 COX7BP24311 80 aa14.9□□□□□ -0.02
SRSF9-202ENST00000546942 SPATA45Q537H7 98 aa14.89□□□□□ -0.03
SRSF9-202ENST00000546942 Q8N377 158 aa14.89□□□□□ -0.03
SRSF9-202ENST00000546942 PAM16Q9Y3D7 125 aa14.88□□□□□ -0.03
SRSF9-202ENST00000546942 A0A1B0GWB2 263 aa14.87□□□□□ -0.03
SRSF9-202ENST00000546942 HIST1H4GQ99525 98 aa14.87□□□□□ -0.03
SRSF9-202ENST00000546942 RPS29P62273 56 aaKnown RBP14.86□□□□□ -0.03
SRSF9-202ENST00000546942 KRTAP13-3Q3SY46 172 aa14.86□□□□□ -0.03
SRSF9-202ENST00000546942 A4D1N5 150 aa14.85□□□□□ -0.03
SRSF9-202ENST00000546942 HIGD1BQ9P298 99 aa14.85□□□□□ -0.03
SRSF9-202ENST00000546942 SLC25A34Q6PIV7 304 aa14.84□□□□□ -0.03
SRSF9-202ENST00000546942 C14orf144Q96I85 54 aa14.84□□□□□ -0.03
SRSF9-202ENST00000546942 SLC25A20O43772 301 aa14.83□□□□□ -0.04
SRSF9-202ENST00000546942 DEFB105AQ8NG35 78 aa14.81□□□□□ -0.04
SRSF9-202ENST00000546942 TMA7Q9Y2S6 64 aaKnown RBP14.81□□□□□ -0.04
SRSF9-202ENST00000546942 SPRR1BP22528 89 aa14.8□□□□□ -0.04
SRSF9-202ENST00000546942 SMIM11BQ8TCY0 68 aa14.8□□□□□ -0.04
SRSF9-202ENST00000546942 TAL2Q16559 108 aa14.79□□□□□ -0.04
SRSF9-202ENST00000546942 HRCT1Q6UXD1 115 aa14.79□□□□□ -0.04
SRSF9-202ENST00000546942 LAMTOR3Q9UHA4 124 aa14.79□□□□□ -0.04
SRSF9-202ENST00000546942 NHP2Q9NX24 153 aaKnown RBP14.78□□□□□ -0.04
SRSF9-202ENST00000546942 VAMP3Q15836 100 aa14.77□□□□□ -0.05
SRSF9-202ENST00000546942 PYY3Q5JQD4 70 aa14.77□□□□□ -0.05
SRSF9-202ENST00000546942 FAT4Q6V0I7 4981 aa14.75□□□□□ -0.05
SRSF9-202ENST00000546942 Q1RN00 199 aa14.75□□□□□ -0.05
SRSF9-202ENST00000546942 C2orf91Q6ZV80 131 aa14.72□□□□□ -0.05
SRSF9-202ENST00000546942 TEX49A0A1B0GTD5 131 aa14.7□□□□□ -0.06
SRSF9-202ENST00000546942 ASB16-AS1Q495Z4 193 aa14.67□□□□□ -0.06
SRSF9-202ENST00000546942 C12orf57Q99622 126 aa14.67□□□□□ -0.06
SRSF9-202ENST00000546942 LIMD2Q9BT23 127 aa14.67□□□□□ -0.06
SRSF9-202ENST00000546942 IGLV5-48A0A075B6I7 105 aa14.66□□□□□ -0.06
SRSF9-202ENST00000546942 A0A0B4J2C4 111 aa14.65□□□□□ -0.06
SRSF9-202ENST00000546942 BVES-AS1Q5T3Y7 98 aa14.65□□□□□ -0.06
SRSF9-202ENST00000546942 TMEM238LA0A1B0GVL6 79 aa14.64□□□□□ -0.07
SRSF9-202ENST00000546942 A6NJY4 79 aa14.64□□□□□ -0.07
SRSF9-202ENST00000546942 CFC1BP0CG36 223 aa14.64□□□□□ -0.07
SRSF9-202ENST00000546942 CFC1P0CG37 223 aa14.64□□□□□ -0.07
SRSF9-202ENST00000546942 CEND1Q8N111 149 aa14.64□□□□□ -0.07
SRSF9-202ENST00000546942 RAB37Q96AX2 223 aa14.64□□□□□ -0.07
SRSF9-202ENST00000546942 SEC61BP60468 96 aaKnown RBP14.63□□□□□ -0.07
SRSF9-202ENST00000546942 LINC00575Q6W349 94 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 910.5 ms