RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PKHD1L1Q86WI1 4243 aa10.11□□□□□ -0.79
CCDC38-203ENST00000546803 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
CCDC38-203ENST00000546803 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
CCDC38-203ENST00000546803 OR13C6PQ8NH95 151 aa10.1□□□□□ -0.79
CCDC38-203ENST00000546803 TRAV23DV6A0A075B6W5 121 aa10.09□□□□□ -0.79
CCDC38-203ENST00000546803 C14orf144Q96I85 54 aa10.07□□□□□ -0.8
CCDC38-203ENST00000546803 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
CCDC38-203ENST00000546803 B5MCH6 92 aa10.06□□□□□ -0.8
CCDC38-203ENST00000546803 ZNF73O43830 326 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-203ENST00000546803 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-203ENST00000546803 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
CCDC38-203ENST00000546803 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
CCDC38-203ENST00000546803 SLC25A34Q6PIV7 304 aa10.05□□□□□ -0.8
CCDC38-203ENST00000546803 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
CCDC38-203ENST00000546803 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
CCDC38-203ENST00000546803 Q6ZRX8 168 aa10.04□□□□□ -0.8
CCDC38-203ENST00000546803 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
CCDC38-203ENST00000546803 HIGD1BQ9P298 99 aa10.04□□□□□ -0.8
CCDC38-203ENST00000546803 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
CCDC38-203ENST00000546803 FAT3Q8TDW7 4589 aa10.03□□□□□ -0.8
CCDC38-203ENST00000546803 A6NDN8 102 aa10.02□□□□□ -0.81
CCDC38-203ENST00000546803 SMCR5Q8TEV8 140 aa10.02□□□□□ -0.81
CCDC38-203ENST00000546803 ZNF706Q9Y5V0 76 aaPredicted RBP10.02□□□□□ -0.81
CCDC38-203ENST00000546803 A4D1N5 150 aa10.01□□□□□ -0.81
CCDC38-203ENST00000546803 CRYGAP11844 174 aa10.01□□□□□ -0.81
CCDC38-203ENST00000546803 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
CCDC38-203ENST00000546803 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
CCDC38-203ENST00000546803 C6orf99Q4VX62 202 aa9.98□□□□□ -0.81
CCDC38-203ENST00000546803 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
CCDC38-203ENST00000546803 Q9BRP9 147 aa9.98□□□□□ -0.81
CCDC38-203ENST00000546803 A0A087X002 238 aa9.97□□□□□ -0.81
CCDC38-203ENST00000546803 ANAPC11Q9NYG5 84 aa9.97□□□□□ -0.81
CCDC38-203ENST00000546803 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.82
CCDC38-203ENST00000546803 TAL2Q16559 108 aa9.96□□□□□ -0.82
CCDC38-203ENST00000546803 COX7BP24311 80 aa9.95□□□□□ -0.82
CCDC38-203ENST00000546803 ELOF1P60002 83 aaKnown RBP9.95□□□□□ -0.82
CCDC38-203ENST00000546803 ERC2-IT1O76042 136 aa9.94□□□□□ -0.82
CCDC38-203ENST00000546803 TYMSOSQ8TAI1 123 aa9.94□□□□□ -0.82
CCDC38-203ENST00000546803 DHRS4-AS1Q9P1J3 65 aa9.94□□□□□ -0.82
CCDC38-203ENST00000546803 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
CCDC38-203ENST00000546803 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
CCDC38-203ENST00000546803 LINC00483Q53H64 154 aa9.92□□□□□ -0.82
CCDC38-203ENST00000546803 KRTAP13-2Q52LG2 175 aa9.91□□□□□ -0.82
CCDC38-203ENST00000546803 CEND1Q8N111 149 aa9.91□□□□□ -0.82
CCDC38-203ENST00000546803 UQCR10Q9UDW1 63 aa9.91□□□□□ -0.82
CCDC38-203ENST00000546803 GAGE2AQ6NT46 116 aa9.9□□□□□ -0.82
CCDC38-203ENST00000546803 C12orf57Q99622 126 aa9.9□□□□□ -0.82
CCDC38-203ENST00000546803 TMEM238LA0A1B0GVL6 79 aa9.89□□□□□ -0.83
CCDC38-203ENST00000546803 A6NJY4 79 aa9.89□□□□□ -0.83
CCDC38-203ENST00000546803 VAMP3Q15836 100 aa9.89□□□□□ -0.83
CCDC38-203ENST00000546803 A0A0B4J2C4 111 aa9.88□□□□□ -0.83
CCDC38-203ENST00000546803 CFC1BP0CG36 223 aa9.88□□□□□ -0.83
CCDC38-203ENST00000546803 CFC1P0CG37 223 aa9.88□□□□□ -0.83
CCDC38-203ENST00000546803 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
CCDC38-203ENST00000546803 HSD52Q0P140 79 aa9.87□□□□□ -0.83
CCDC38-203ENST00000546803 RAB37Q96AX2 223 aa9.87□□□□□ -0.83
CCDC38-203ENST00000546803 TNXBP22105 4242 aa9.87□□□□□ -0.83
CCDC38-203ENST00000546803 NHP2Q9NX24 153 aaKnown RBP9.86□□□□□ -0.83
CCDC38-203ENST00000546803 C3orf22Q8N5N4 141 aa9.85□□□□□ -0.83
CCDC38-203ENST00000546803 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
CCDC38-203ENST00000546803 SPRR1BP22528 89 aa9.83□□□□□ -0.84
CCDC38-203ENST00000546803 FXYD2P54710 66 aa9.83□□□□□ -0.84
CCDC38-203ENST00000546803 HERC1Q15751 4861 aa9.82□□□□□ -0.84
CCDC38-203ENST00000546803 SLC25A20O43772 301 aa9.82□□□□□ -0.84
CCDC38-203ENST00000546803 BVES-AS1Q5T3Y7 98 aa9.82□□□□□ -0.84
CCDC38-203ENST00000546803 LINC00304Q8N9R0 145 aa9.82□□□□□ -0.84
CCDC38-203ENST00000546803 LOC105371267A0A1B0GV96 52 aa9.81□□□□□ -0.84
CCDC38-203ENST00000546803 CTAG1AP78358 180 aa9.81□□□□□ -0.84
CCDC38-203ENST00000546803 PRO1854Q9UHT4 67 aa9.81□□□□□ -0.84
CCDC38-203ENST00000546803 H7C2G1 150 aa9.8□□□□□ -0.84
CCDC38-203ENST00000546803 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
CCDC38-203ENST00000546803 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
CCDC38-203ENST00000546803 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
CCDC38-203ENST00000546803 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
CCDC38-203ENST00000546803 IGLV9-49A0A0B4J1Y8 123 aa9.78□□□□□ -0.84
CCDC38-203ENST00000546803 PRO1933Q9H354 126 aa9.78□□□□□ -0.84
CCDC38-203ENST00000546803 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
CCDC38-203ENST00000546803 TSPAN13O95857 204 aa9.77□□□□□ -0.85
CCDC38-203ENST00000546803 MOBPQ13875 183 aa9.77□□□□□ -0.85
CCDC38-203ENST00000546803 Q1RN00 199 aa9.77□□□□□ -0.85
CCDC38-203ENST00000546803 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
CCDC38-203ENST00000546803 LAMTOR3Q9UHA4 124 aa9.77□□□□□ -0.85
CCDC38-203ENST00000546803 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
CCDC38-203ENST00000546803 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
CCDC38-203ENST00000546803 Q8NBF4 154 aa9.76□□□□□ -0.85
CCDC38-203ENST00000546803 H0YGX0 51 aa9.75□□□□□ -0.85
CCDC38-203ENST00000546803 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
CCDC38-203ENST00000546803 SNCGO76070 127 aa9.73□□□□□ -0.85
CCDC38-203ENST00000546803 LINC01547P58512 204 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-203ENST00000546803 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.72□□□□□ -0.85
CCDC38-203ENST00000546803 Q6ZQY7 126 aa9.71□□□□□ -0.86
CCDC38-203ENST00000546803 Q8N377 158 aa9.71□□□□□ -0.86
CCDC38-203ENST00000546803 TSTD3H0UI37 97 aa9.7□□□□□ -0.86
CCDC38-203ENST00000546803 K7ERJ3 54 aa9.7□□□□□ -0.86
CCDC38-203ENST00000546803 SPINK1P00995 79 aa9.7□□□□□ -0.86
CCDC38-203ENST00000546803 M0R143 59 aa9.69□□□□□ -0.86
CCDC38-203ENST00000546803 SMIM29Q86T20 159 aa9.69□□□□□ -0.86
CCDC38-203ENST00000546803 A0A1B0GX51 115 aa9.67□□□□□ -0.86
CCDC38-203ENST00000546803 TRIAP1O43715 76 aa9.67□□□□□ -0.86
CCDC38-203ENST00000546803 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms