RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ZNF73O43830 326 aaPredicted RBP2.15□□□□□ -2.07
CPNE8-204ENST00000546603 HIGD2AQ9BW72 106 aa2.15□□□□□ -2.07
CPNE8-204ENST00000546603 NOP10Q9NPE3 64 aaKnown RBP2.15□□□□□ -2.07
CPNE8-204ENST00000546603 CEP290O15078 2479 aa2.15□□□□□ -2.07
CPNE8-204ENST00000546603 MAP1BP46821 2468 aaKnown RBP2.15□□□□□ -2.07
CPNE8-204ENST00000546603 SPTBN2O15020 2390 aa2.14□□□□□ -2.07
CPNE8-204ENST00000546603 TRAV22A0A0B4J277 110 aa2.14□□□□□ -2.07
CPNE8-204ENST00000546603 H3BPC8 53 aa2.14□□□□□ -2.07
CPNE8-204ENST00000546603 ANGP03950 147 aaKnown RBP2.14□□□□□ -2.07
CPNE8-204ENST00000546603 MSMBP08118 114 aa2.14□□□□□ -2.07
CPNE8-204ENST00000546603 PRR15LQ9BU68 103 aa2.14□□□□□ -2.07
CPNE8-204ENST00000546603 MED13LQ71F56 2210 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 HCG22E2RYF7 251 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 M0R378 163 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 SPAG11BQ08648 103 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 C4orf3Q8WVX3 66 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 LINC00208Q96KT6 92 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 CCL19Q99731 98 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 WFDC10AQ9H1F0 79 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
CPNE8-204ENST00000546603 J3QKU1 62 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 PSCAO43653 123 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 PRB1P04280 392 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 DEFB130BP0DP73 79 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 DEFB130AP0DP74 79 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 FAM229BQ4G0N7 80 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 CASC2Q6XLA1 102 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 C7orf65Q6ZTY9 151 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 DEFB105AQ8NG35 78 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 PRO0255Q9UI72 69 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 DOPEY2Q9Y3R5 2298 aa2.12□□□□□ -2.07
CPNE8-204ENST00000546603 TECTAO75443 2155 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 C3orf84H3BNL1 204 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 CLPSL2Q6UWE3 100 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 LCA10Q71F78 164 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 PHF5AQ7RTV0 110 aaKnown RBP2.11□□□□□ -2.07
CPNE8-204ENST00000546603 CACNA1BQ00975 2339 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 PCNX1Q96RV3 2341 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 CEP350Q5VT06 3117 aa2.11□□□□□ -2.07
CPNE8-204ENST00000546603 CENPFP49454 3210 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 CHD9Q3L8U1 2897 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 ANKHD1Q8IWZ3 2542 aaKnown RBP2.1□□□□□ -2.07
CPNE8-204ENST00000546603 APC2O95996 2303 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 A0A096LNT2 108 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 GVQW2A0A096LPI5 108 aaPredicted RBP2.1□□□□□ -2.07
CPNE8-204ENST00000546603 PRM2P04554 102 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 DEFB112Q30KQ8 113 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 Q9BRP9 147 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 LINC00588Q9Y4M8 146 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 PIEZO2Q9H5I5 2752 aa2.1□□□□□ -2.07
CPNE8-204ENST00000546603 SPTBN1Q01082 2364 aaKnown RBP2.1□□□□□ -2.07
CPNE8-204ENST00000546603 LCE6AA0A183 80 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 LOC101927531A0A1B0GV80 90 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 H0Y9P7 68 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 DEFB136Q30KP8 78 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 C9orf116Q5BN46 136 aaPredicted RBP2.09□□□□□ -2.07
CPNE8-204ENST00000546603 C1orf137Q5JT78 98 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 UNQ6190/PRO20217Q6UXQ8 127 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 DEFB123Q8N688 67 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 XAGE1AQ9HD64 81 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
CPNE8-204ENST00000546603 CNOT1A5YKK6 2376 aaKnown RBP2.09□□□□□ -2.08
CPNE8-204ENST00000546603 COL6A6A6NMZ7 2263 aa2.08□□□□□ -2.08
CPNE8-204ENST00000546603 C5orf42Q9H799 3197 aa2.08□□□□□ -2.08
CPNE8-204ENST00000546603 WFDC10BQ8IUB3 73 aa2.08□□□□□ -2.08
CPNE8-204ENST00000546603 CACNA1HO95180 2353 aa2.08□□□□□ -2.08
CPNE8-204ENST00000546603 PRRC2CQ9Y520 2896 aaKnown RBP2.08□□□□□ -2.08
CPNE8-204ENST00000546603 CHD7Q9P2D1 2997 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 ZDBF2Q9HCK1 2354 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 IGLV5-48A0A075B6I7 105 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 M0R2N4 97 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 ASB16-AS1Q495Z4 193 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 LELP1Q5T871 98 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 Q5VV11 94 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 WFDC13Q8IUB5 93 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 KCNQ1DNQ9H478 68 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 TP53AIP1Q9HCN2 124 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 FBN3Q75N90 2809 aa2.07□□□□□ -2.08
CPNE8-204ENST00000546603 SORL1Q92673 2214 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 A0A096LPF7 62 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 C19orf84I3L1E1 186 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 SPART-AS1P0CW21 52 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 C10orf99Q6UWK7 81 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 COA5Q86WW8 74 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.06□□□□□ -2.084e-11■■■■■ 41.7
CPNE8-204ENST00000546603 HTTP42858 3142 aa2.06□□□□□ -2.08
CPNE8-204ENST00000546603 PTPRZ1P23471 2315 aaPredicted RBP2.05□□□□□ -2.08
CPNE8-204ENST00000546603 EP300Q09472 2414 aaPredicted RBP2.05□□□□□ -2.08
CPNE8-204ENST00000546603 A6NN06 94 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 K7EQZ3 153 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 HTN3P15516 51 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 Q6ZRX8 168 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 Q8NAQ8 132 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 RETNLBQ9BQ08 111 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 C6orf48Q9UBA6 75 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 AKAP6Q13023 2319 aa2.05□□□□□ -2.08
CPNE8-204ENST00000546603 NCOR1O75376 2440 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms