RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
HOXC11-202ENST00000546378 H7BZZ5 65 aa9.79□□□□□ -0.84
HOXC11-202ENST00000546378 FAM168BA1KXE4 195 aa9.78□□□□□ -0.84
HOXC11-202ENST00000546378 IGKV2-24A0A0C4DH68 120 aa9.78□□□□□ -0.84
HOXC11-202ENST00000546378 KPRPQ5T749 579 aaPredicted RBP9.78□□□□□ -0.84
HOXC11-202ENST00000546378 Q5XG85 94 aa9.78□□□□□ -0.84
HOXC11-202ENST00000546378 ST20-AS1Q8NBB2 130 aa9.77□□□□□ -0.85
HOXC11-202ENST00000546378 TRAV7A0A075B6U4 112 aa9.76□□□□□ -0.85
HOXC11-202ENST00000546378 MIFP14174 115 aa9.76□□□□□ -0.85
HOXC11-202ENST00000546378 UBE2BP63146 152 aa9.76□□□□□ -0.85
HOXC11-202ENST00000546378 NDUFC2O95298 119 aa9.76□□□□□ -0.85
HOXC11-202ENST00000546378 APOC4P55056 127 aa9.76□□□□□ -0.85
HOXC11-202ENST00000546378 A0A0J9YWU9 116 aa9.75□□□□□ -0.85
HOXC11-202ENST00000546378 LYPD5Q6UWN5 251 aa9.75□□□□□ -0.85
HOXC11-202ENST00000546378 KRTAP10-11P60412 298 aa9.74□□□□□ -0.85
HOXC11-202ENST00000546378 COX17Q14061 63 aa9.74□□□□□ -0.85
HOXC11-202ENST00000546378 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
HOXC11-202ENST00000546378 ATP5EP2Q5VTU8 51 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 Q6ZRP5 223 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 TMEM254Q8TBM7 123 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 LELP1Q5T871 98 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 LYRM9A8MSI8 78 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
HOXC11-202ENST00000546378 SMIM29Q86T20 159 aa9.71□□□□□ -0.85
HOXC11-202ENST00000546378 IGLV6-57P01721 117 aa9.71□□□□□ -0.86
HOXC11-202ENST00000546378 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
HOXC11-202ENST00000546378 PSPHP1O15172 72 aa9.7□□□□□ -0.86
HOXC11-202ENST00000546378 ETDCA0A1B0GVM5 59 aa9.69□□□□□ -0.86
HOXC11-202ENST00000546378 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
HOXC11-202ENST00000546378 CASC10Q5T4H9 136 aa9.69□□□□□ -0.86
HOXC11-202ENST00000546378 Q8NAQ8 132 aa9.69□□□□□ -0.86
HOXC11-202ENST00000546378 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.68□□□□□ -0.86
HOXC11-202ENST00000546378 MDFIQ99750 246 aa9.68□□□□□ -0.86
HOXC11-202ENST00000546378 ESRGQ1W209 222 aa9.67□□□□□ -0.86
HOXC11-202ENST00000546378 FUSP35637 526 aaKnown RBP eCLIP9.67□□□□□ -0.86
HOXC11-202ENST00000546378 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
HOXC11-202ENST00000546378 VPREB1P12018 145 aa9.66□□□□□ -0.86
HOXC11-202ENST00000546378 SERP1Q9Y6X1 66 aa9.65□□□□□ -0.86
HOXC11-202ENST00000546378 FP248Q71RG6 208 aaPredicted RBP9.65□□□□□ -0.86
HOXC11-202ENST00000546378 LINC00167Q96N53 147 aa9.65□□□□□ -0.86
HOXC11-202ENST00000546378 M0R378 163 aa9.64□□□□□ -0.87
HOXC11-202ENST00000546378 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
HOXC11-202ENST00000546378 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
HOXC11-202ENST00000546378 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
HOXC11-202ENST00000546378 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
HOXC11-202ENST00000546378 PRLHP81277 87 aa9.63□□□□□ -0.87
HOXC11-202ENST00000546378 NDUFC2-KCTD14E9PQ53 114 aa9.62□□□□□ -0.87
HOXC11-202ENST00000546378 LOC110117498A0A087WWA1 95 aa9.62□□□□□ -0.87
HOXC11-202ENST00000546378 C1orf137Q5JT78 98 aa9.61□□□□□ -0.87
HOXC11-202ENST00000546378 PRYO14603 147 aa9.61□□□□□ -0.87
HOXC11-202ENST00000546378 ERC2-IT1O76042 136 aa9.61□□□□□ -0.87
HOXC11-202ENST00000546378 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
HOXC11-202ENST00000546378 TRBV7-4A0A0J9YYF1 115 aa9.59□□□□□ -0.87
HOXC11-202ENST00000546378 SMIM26A0A096LP01 95 aa9.58□□□□□ -0.88
HOXC11-202ENST00000546378 IGKV4-1P06312 121 aa9.58□□□□□ -0.88
HOXC11-202ENST00000546378 Q8N377 158 aa9.58□□□□□ -0.88
HOXC11-202ENST00000546378 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
HOXC11-202ENST00000546378 K7EQZ3 153 aa9.57□□□□□ -0.88
HOXC11-202ENST00000546378 CXCL6P80162 114 aa9.57□□□□□ -0.88
HOXC11-202ENST00000546378 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
HOXC11-202ENST00000546378 PDE6GP18545 87 aa9.57□□□□□ -0.88
HOXC11-202ENST00000546378 EGFEM1PQ0D2K5 195 aa9.56□□□□□ -0.88
HOXC11-202ENST00000546378 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
HOXC11-202ENST00000546378 C11orf45Q8TAV5 145 aa9.56□□□□□ -0.88
HOXC11-202ENST00000546378 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
HOXC11-202ENST00000546378 A0A087WSZ3 146 aa9.54□□□□□ -0.88
HOXC11-202ENST00000546378 WIPF1O43516 503 aa9.54□□□□□ -0.88
HOXC11-202ENST00000546378 PSCAO43653 123 aa9.53□□□□□ -0.88
HOXC11-202ENST00000546378 A0A1W2PNM2 257 aa9.52□□□□□ -0.89
HOXC11-202ENST00000546378 K7EIL1 84 aa9.51□□□□□ -0.89
HOXC11-202ENST00000546378 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
HOXC11-202ENST00000546378 LINC00208Q96KT6 92 aa9.5□□□□□ -0.89
HOXC11-202ENST00000546378 Q9BRP9 147 aa9.5□□□□□ -0.89
HOXC11-202ENST00000546378 PRO0628Q9UI54 55 aa9.49□□□□□ -0.89
HOXC11-202ENST00000546378 H0Y9J4 135 aa9.48□□□□□ -0.89
HOXC11-202ENST00000546378 SPTSSBQ8NFR3 76 aa9.47□□□□□ -0.89
HOXC11-202ENST00000546378 ANK2Q01484 3957 aa9.47□□□□□ -0.89
HOXC11-202ENST00000546378 EPM2AB3EWF7 344 aa9.46□□□□□ -0.89
HOXC11-202ENST00000546378 OCR1Q9BZK8 76 aa9.45□□□□□ -0.9
HOXC11-202ENST00000546378 A8MU10 97 aa9.44□□□□□ -0.9
HOXC11-202ENST00000546378 C1orf195Q5TG92 126 aa9.44□□□□□ -0.9
HOXC11-202ENST00000546378 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
HOXC11-202ENST00000546378 C1orf64Q8NEQ6 169 aa9.44□□□□□ -0.9
HOXC11-202ENST00000546378 NDUFS5O43920 106 aa9.43□□□□□ -0.9
HOXC11-202ENST00000546378 Q6ZRX8 168 aa9.43□□□□□ -0.9
HOXC11-202ENST00000546378 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
HOXC11-202ENST00000546378 MRPL55Q7Z7F7 128 aaKnown RBP9.43□□□□□ -0.9
HOXC11-202ENST00000546378 NDUFC1O43677 76 aa9.41□□□□□ -0.9
HOXC11-202ENST00000546378 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
HOXC11-202ENST00000546378 UBE2AP49459 152 aa9.41□□□□□ -0.9
HOXC11-202ENST00000546378 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
HOXC11-202ENST00000546378 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
HOXC11-202ENST00000546378 A8MUN3 132 aa9.4□□□□□ -0.9
HOXC11-202ENST00000546378 LINC00588Q9Y4M8 146 aa9.39□□□□□ -0.91
HOXC11-202ENST00000546378 DSCR10P59022 87 aa9.38□□□□□ -0.91
HOXC11-202ENST00000546378 Q8NBF4 154 aa9.38□□□□□ -0.91
HOXC11-202ENST00000546378 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
HOXC11-202ENST00000546378 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
HOXC11-202ENST00000546378 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms