RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 RPL28P46779 137 aaKnown RBP8.64□□□□□ -1.03
CLSTN3-216ENST00000545663 PYY3Q5JQD4 70 aa8.64□□□□□ -1.03
CLSTN3-216ENST00000545663 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
CLSTN3-216ENST00000545663 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
CLSTN3-216ENST00000545663 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
CLSTN3-216ENST00000545663 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
CLSTN3-216ENST00000545663 COX8AP10176 69 aa8.63□□□□□ -1.03
CLSTN3-216ENST00000545663 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
CLSTN3-216ENST00000545663 PCP2Q8IVA1 136 aa8.63□□□□□ -1.03
CLSTN3-216ENST00000545663 IFITM1P13164 125 aa8.62□□□□□ -1.03
CLSTN3-216ENST00000545663 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-216ENST00000545663 PAM16Q9Y3D7 125 aa8.62□□□□□ -1.03
CLSTN3-216ENST00000545663 MACF1Q9UPN3 7388 aaKnown RBP8.62□□□□□ -1.03
CLSTN3-216ENST00000545663 M0R2T5 61 aa8.61□□□□□ -1.03
CLSTN3-216ENST00000545663 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
CLSTN3-216ENST00000545663 SPANXDQ9BXN6 97 aa8.61□□□□□ -1.03
CLSTN3-216ENST00000545663 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
CLSTN3-216ENST00000545663 SPANXCQ9NY87 97 aa8.61□□□□□ -1.03
CLSTN3-216ENST00000545663 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
CLSTN3-216ENST00000545663 BCE1O60756 84 aa8.6□□□□□ -1.03
CLSTN3-216ENST00000545663 NDUFC2O95298 119 aa8.6□□□□□ -1.03
CLSTN3-216ENST00000545663 FAM229BQ4G0N7 80 aa8.6□□□□□ -1.03
CLSTN3-216ENST00000545663 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-216ENST00000545663 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
CLSTN3-216ENST00000545663 SMIM6P0DI80 62 aa8.59□□□□□ -1.03
CLSTN3-216ENST00000545663 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
CLSTN3-216ENST00000545663 LITAFQ99732 161 aa8.59□□□□□ -1.03
CLSTN3-216ENST00000545663 CBY1Q9Y3M2 126 aa8.59□□□□□ -1.03
CLSTN3-216ENST00000545663 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
CLSTN3-216ENST00000545663 VPREB1P12018 145 aa8.58□□□□□ -1.04
CLSTN3-216ENST00000545663 CTAG1AP78358 180 aa8.58□□□□□ -1.04
CLSTN3-216ENST00000545663 ADAMTSL4-AS1Q5T5F5 129 aa8.58□□□□□ -1.04
CLSTN3-216ENST00000545663 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
CLSTN3-216ENST00000545663 M0R378 163 aa8.57□□□□□ -1.04
CLSTN3-216ENST00000545663 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
CLSTN3-216ENST00000545663 DAND5Q8N907 189 aa8.57□□□□□ -1.04
CLSTN3-216ENST00000545663 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
CLSTN3-216ENST00000545663 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
CLSTN3-216ENST00000545663 C3orf22Q8N5N4 141 aa8.55□□□□□ -1.04
CLSTN3-216ENST00000545663 C14orf144Q96I85 54 aa8.55□□□□□ -1.04
CLSTN3-216ENST00000545663 LINC00167Q96N53 147 aa8.54□□□□□ -1.04
CLSTN3-216ENST00000545663 XP32Q5T750 250 aa8.53□□□□□ -1.04
CLSTN3-216ENST00000545663 KRTAP13-1Q8IUC0 172 aa8.53□□□□□ -1.04
CLSTN3-216ENST00000545663 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
CLSTN3-216ENST00000545663 HIST1H4GQ99525 98 aa8.52□□□□□ -1.05
CLSTN3-216ENST00000545663 UQCR10Q9UDW1 63 aa8.52□□□□□ -1.05
CLSTN3-216ENST00000545663 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
CLSTN3-216ENST00000545663 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
CLSTN3-216ENST00000545663 NPC2P61916 151 aa8.51□□□□□ -1.05
CLSTN3-216ENST00000545663 TAL2Q16559 108 aa8.51□□□□□ -1.05
CLSTN3-216ENST00000545663 S100A7L2Q5SY68 101 aa8.51□□□□□ -1.05
CLSTN3-216ENST00000545663 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
CLSTN3-216ENST00000545663 GAGE10A6NGK3 116 aa8.5□□□□□ -1.05
CLSTN3-216ENST00000545663 MUSTN1Q8IVN3 82 aa8.5□□□□□ -1.05
CLSTN3-216ENST00000545663 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
CLSTN3-216ENST00000545663 NCR3O14931 201 aa8.49□□□□□ -1.05
CLSTN3-216ENST00000545663 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
CLSTN3-216ENST00000545663 PRYO14603 147 aa8.48□□□□□ -1.05
CLSTN3-216ENST00000545663 DDTP30046 118 aa8.48□□□□□ -1.05
CLSTN3-216ENST00000545663 IGLV8-61A0A075B6I0 122 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 A6NJY4 79 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 UBE2AP49459 152 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 Q8NDZ9 215 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
CLSTN3-216ENST00000545663 IGLV6-57P01721 117 aa8.46□□□□□ -1.06
CLSTN3-216ENST00000545663 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 HINT1P49773 126 aaPredicted RBP8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 C2orf91Q6ZV80 131 aa8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
CLSTN3-216ENST00000545663 TSTD3H0UI37 97 aa8.44□□□□□ -1.06
CLSTN3-216ENST00000545663 HSD52Q0P140 79 aa8.44□□□□□ -1.06
CLSTN3-216ENST00000545663 C12orf57Q99622 126 aa8.44□□□□□ -1.06
CLSTN3-216ENST00000545663 A4D1N5 150 aa8.43□□□□□ -1.06
CLSTN3-216ENST00000545663 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
CLSTN3-216ENST00000545663 TRAV23DV6A0A075B6W5 121 aa8.42□□□□□ -1.06
CLSTN3-216ENST00000545663 A6NDN8 102 aa8.42□□□□□ -1.06
CLSTN3-216ENST00000545663 CEND1Q8N111 149 aa8.42□□□□□ -1.06
CLSTN3-216ENST00000545663 ETDCA0A1B0GVM5 59 aa8.41□□□□□ -1.06
CLSTN3-216ENST00000545663 SPRR1AP35321 89 aa8.41□□□□□ -1.06
CLSTN3-216ENST00000545663 PRLHP81277 87 aa8.41□□□□□ -1.06
CLSTN3-216ENST00000545663 ZNF73O43830 326 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-216ENST00000545663 FAM19A1Q7Z5A9 133 aa8.39□□□□□ -1.07
CLSTN3-216ENST00000545663 RAB37Q96AX2 223 aa8.39□□□□□ -1.07
CLSTN3-216ENST00000545663 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
CLSTN3-216ENST00000545663 TRBV7-6A0A0J9YX20 115 aa8.38□□□□□ -1.07
CLSTN3-216ENST00000545663 Q8NBF4 154 aa8.38□□□□□ -1.07
CLSTN3-216ENST00000545663 PRO1933Q9H354 126 aa8.37□□□□□ -1.07
CLSTN3-216ENST00000545663 M0R143 59 aa8.36□□□□□ -1.07
CLSTN3-216ENST00000545663 VAMP3Q15836 100 aa8.36□□□□□ -1.07
CLSTN3-216ENST00000545663 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
CLSTN3-216ENST00000545663 Q6ZRX8 168 aa8.35□□□□□ -1.07
CLSTN3-216ENST00000545663 A0A1B0GWB2 263 aa8.34□□□□□ -1.07
CLSTN3-216ENST00000545663 CFC1P0CG37 223 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms