RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
SCARB1-210ENST00000545493 SPINK1P00995 79 aa11.93□□□□□ -0.5
SCARB1-210ENST00000545493 LITAFQ99732 161 aa11.93□□□□□ -0.5
SCARB1-210ENST00000545493 KRTAP13-3Q3SY46 172 aa11.92□□□□□ -0.5
SCARB1-210ENST00000545493 LCE2AQ5TA79 106 aaPredicted RBP11.92□□□□□ -0.5
SCARB1-210ENST00000545493 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
SCARB1-210ENST00000545493 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
SCARB1-210ENST00000545493 S100A1P23297 94 aa11.89□□□□□ -0.51
SCARB1-210ENST00000545493 RPS29P62273 56 aaKnown RBP11.88□□□□□ -0.51
SCARB1-210ENST00000545493 JOSD1Q15040 202 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-210ENST00000545493 LINC00308Q8TCZ7 52 aa11.88□□□□□ -0.51
SCARB1-210ENST00000545493 SSBP3-AS1Q7Z2R9 100 aa11.87□□□□□ -0.51
SCARB1-210ENST00000545493 Q8N377 158 aa11.87□□□□□ -0.51
SCARB1-210ENST00000545493 ST20-AS1Q8NBB2 130 aa11.87□□□□□ -0.51
SCARB1-210ENST00000545493 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
SCARB1-210ENST00000545493 TTTY13Q9BZ97 58 aa11.86□□□□□ -0.51
SCARB1-210ENST00000545493 TIMM17BO60830 172 aa11.85□□□□□ -0.51
SCARB1-210ENST00000545493 PET117Q6UWS5 81 aa11.85□□□□□ -0.51
SCARB1-210ENST00000545493 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
SCARB1-210ENST00000545493 C9orf153Q5TBE3 101 aa11.83□□□□□ -0.52
SCARB1-210ENST00000545493 C3orf79P0CE67 100 aa11.82□□□□□ -0.52
SCARB1-210ENST00000545493 OR13C6PQ8NH95 151 aa11.79□□□□□ -0.52
SCARB1-210ENST00000545493 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
SCARB1-210ENST00000545493 CBY1Q9Y3M2 126 aa11.79□□□□□ -0.52
SCARB1-210ENST00000545493 C5orf52A6NGY3 159 aa11.78□□□□□ -0.52
SCARB1-210ENST00000545493 ASB16-AS1Q495Z4 193 aa11.78□□□□□ -0.52
SCARB1-210ENST00000545493 SLC25A20O43772 301 aa11.77□□□□□ -0.53
SCARB1-210ENST00000545493 SPRR1BP22528 89 aa11.77□□□□□ -0.53
SCARB1-210ENST00000545493 HINT1P49773 126 aaPredicted RBP11.77□□□□□ -0.53
SCARB1-210ENST00000545493 COA6Q5JTJ3 125 aaKnown RBP11.77□□□□□ -0.53
SCARB1-210ENST00000545493 KRTDAPP60985 99 aa11.75□□□□□ -0.53
SCARB1-210ENST00000545493 ELOF1P60002 83 aaKnown RBP11.74□□□□□ -0.53
SCARB1-210ENST00000545493 ANKRD39Q53RE8 183 aa11.73□□□□□ -0.53
SCARB1-210ENST00000545493 KRTAP4-1Q9BYQ7 146 aa11.73□□□□□ -0.53
SCARB1-210ENST00000545493 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
SCARB1-210ENST00000545493 C6orf99Q4VX62 202 aa11.72□□□□□ -0.53
SCARB1-210ENST00000545493 KRTAP9-2Q9BYQ4 174 aa11.72□□□□□ -0.53
SCARB1-210ENST00000545493 COX7BP24311 80 aa11.7□□□□□ -0.54
SCARB1-210ENST00000545493 SCGB1D4Q6XE38 83 aa11.69□□□□□ -0.54
SCARB1-210ENST00000545493 LINC00518Q8N0U6 118 aa11.69□□□□□ -0.54
SCARB1-210ENST00000545493 XP32Q5T750 250 aa11.68□□□□□ -0.54
SCARB1-210ENST00000545493 SEC61BP60468 96 aaKnown RBP11.67□□□□□ -0.54
SCARB1-210ENST00000545493 SLC25A34Q6PIV7 304 aa11.67□□□□□ -0.54
SCARB1-210ENST00000545493 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
SCARB1-210ENST00000545493 C20orf202A1L168 122 aa11.66□□□□□ -0.54
SCARB1-210ENST00000545493 HRCT1Q6UXD1 115 aa11.65□□□□□ -0.54
SCARB1-210ENST00000545493 LAMTOR3Q9UHA4 124 aa11.65□□□□□ -0.54
SCARB1-210ENST00000545493 PCP2Q8IVA1 136 aa11.64□□□□□ -0.55
SCARB1-210ENST00000545493 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
SCARB1-210ENST00000545493 Q1RN00 199 aa11.63□□□□□ -0.55
SCARB1-210ENST00000545493 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
SCARB1-210ENST00000545493 IFITM1P13164 125 aa11.62□□□□□ -0.55
SCARB1-210ENST00000545493 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
SCARB1-210ENST00000545493 LINC01547P58512 204 aaPredicted RBP11.6□□□□□ -0.55
SCARB1-210ENST00000545493 MUSTN1Q8IVN3 82 aa11.6□□□□□ -0.55
SCARB1-210ENST00000545493 DEFB105AQ8NG35 78 aa11.6□□□□□ -0.55
SCARB1-210ENST00000545493 COPS9Q8WXC6 57 aa11.6□□□□□ -0.55
SCARB1-210ENST00000545493 TEX49A0A1B0GTD5 131 aa11.59□□□□□ -0.55
SCARB1-210ENST00000545493 Q6ZVH6 145 aa11.59□□□□□ -0.55
SCARB1-210ENST00000545493 SMIM29Q86T20 159 aa11.59□□□□□ -0.55
SCARB1-210ENST00000545493 A6NDN8 102 aa11.58□□□□□ -0.56
SCARB1-210ENST00000545493 TAL2Q16559 108 aa11.58□□□□□ -0.56
SCARB1-210ENST00000545493 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
SCARB1-210ENST00000545493 CD164Q04900 197 aa11.55□□□□□ -0.56
SCARB1-210ENST00000545493 PRO1933Q9H354 126 aa11.55□□□□□ -0.56
SCARB1-210ENST00000545493 AKR1D1P51857 326 aa11.53□□□□□ -0.56
SCARB1-210ENST00000545493 C9orf92A6NGG3 77 aa11.52□□□□□ -0.57
SCARB1-210ENST00000545493 H7C2G1 150 aa11.52□□□□□ -0.57
SCARB1-210ENST00000545493 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
SCARB1-210ENST00000545493 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
SCARB1-210ENST00000545493 A0A0G2JQZ4 141 aa11.5□□□□□ -0.57
SCARB1-210ENST00000545493 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
SCARB1-210ENST00000545493 A4D1N5 150 aa11.49□□□□□ -0.57
SCARB1-210ENST00000545493 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
SCARB1-210ENST00000545493 Q5XG85 94 aa11.49□□□□□ -0.57
SCARB1-210ENST00000545493 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
SCARB1-210ENST00000545493 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.57
SCARB1-210ENST00000545493 KRTAP19-2Q3LHN2 52 aa11.45□□□□□ -0.58
SCARB1-210ENST00000545493 PCOTHQ58A44 107 aa11.45□□□□□ -0.58
SCARB1-210ENST00000545493 LCE2CQ5TA81 110 aa11.44□□□□□ -0.58
SCARB1-210ENST00000545493 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
SCARB1-210ENST00000545493 S100A6P06703 90 aa11.41□□□□□ -0.58
SCARB1-210ENST00000545493 S100A2P29034 98 aa11.41□□□□□ -0.58
SCARB1-210ENST00000545493 IGLV8-61A0A075B6I0 122 aa11.39□□□□□ -0.59
SCARB1-210ENST00000545493 HSBP1L1C9JCN9 74 aa11.38□□□□□ -0.59
SCARB1-210ENST00000545493 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
SCARB1-210ENST00000545493 KRTAP9-6A0A140TA67 174 aa11.36□□□□□ -0.59
SCARB1-210ENST00000545493 Q6ZQY7 126 aa11.36□□□□□ -0.59
SCARB1-210ENST00000545493 F8WEM9 126 aa11.34□□□□□ -0.59
SCARB1-210ENST00000545493 VAMP3Q15836 100 aa11.34□□□□□ -0.59
SCARB1-210ENST00000545493 C12orf57Q99622 126 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms