RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
RTN3-214ENST00000545432 TRAV12-1A0A0B4J245 112 aa7.73□□□□□ -1.17
RTN3-214ENST00000545432 NDUFA5Q16718 116 aa7.73□□□□□ -1.17
RTN3-214ENST00000545432 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
RTN3-214ENST00000545432 NDUFC2O95298 119 aa7.71□□□□□ -1.18
RTN3-214ENST00000545432 PMCHL1Q16048 86 aa7.71□□□□□ -1.18
RTN3-214ENST00000545432 SPANXB1Q9NS25 103 aaPredicted RBP7.71□□□□□ -1.18
RTN3-214ENST00000545432 SNAPINO95295 136 aa7.7□□□□□ -1.18
RTN3-214ENST00000545432 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
RTN3-214ENST00000545432 SVBPQ8N300 66 aa7.7□□□□□ -1.18
RTN3-214ENST00000545432 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
RTN3-214ENST00000545432 ZNF73O43830 326 aaPredicted RBP7.69□□□□□ -1.18
RTN3-214ENST00000545432 APOC3P02656 99 aa7.69□□□□□ -1.18
RTN3-214ENST00000545432 C1orf195Q5TG92 126 aa7.69□□□□□ -1.18
RTN3-214ENST00000545432 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
RTN3-214ENST00000545432 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
RTN3-214ENST00000545432 MACF1Q9UPN3 7388 aaKnown RBP7.67□□□□□ -1.18
RTN3-214ENST00000545432 CHCHD1Q96BP2 118 aaKnown RBP7.67□□□□□ -1.18
RTN3-214ENST00000545432 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
RTN3-214ENST00000545432 S100A7L2Q5SY68 101 aa7.65□□□□□ -1.18
RTN3-214ENST00000545432 IFI27L1Q96BM0 104 aa7.65□□□□□ -1.18
RTN3-214ENST00000545432 LAMTOR3Q9UHA4 124 aa7.65□□□□□ -1.18
RTN3-214ENST00000545432 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
RTN3-214ENST00000545432 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
RTN3-214ENST00000545432 PRO1933Q9H354 126 aa7.63□□□□□ -1.19
RTN3-214ENST00000545432 HSBP1O75506 76 aa7.62□□□□□ -1.19
RTN3-214ENST00000545432 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
RTN3-214ENST00000545432 SMIM29Q86T20 159 aa7.61□□□□□ -1.19
RTN3-214ENST00000545432 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
RTN3-214ENST00000545432 H7C2G1 150 aa7.6□□□□□ -1.19
RTN3-214ENST00000545432 LEPROTO15243 131 aa7.6□□□□□ -1.19
RTN3-214ENST00000545432 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
RTN3-214ENST00000545432 HINT1P49773 126 aaPredicted RBP7.6□□□□□ -1.19
RTN3-214ENST00000545432 CBY1Q9Y3M2 126 aa7.6□□□□□ -1.19
RTN3-214ENST00000545432 LCE2BO14633 110 aa7.59□□□□□ -1.19
RTN3-214ENST00000545432 YPEL4Q96NS1 127 aa7.58□□□□□ -1.2
RTN3-214ENST00000545432 MIEN1Q9BRT3 115 aa7.58□□□□□ -1.2
RTN3-214ENST00000545432 PLNP26678 52 aa7.57□□□□□ -1.2
RTN3-214ENST00000545432 AKR1D1P51857 326 aa7.57□□□□□ -1.2
RTN3-214ENST00000545432 H0Y8G0 127 aa7.56□□□□□ -1.2
RTN3-214ENST00000545432 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
RTN3-214ENST00000545432 NMUP48645 174 aa7.56□□□□□ -1.2
RTN3-214ENST00000545432 J3QQQ9 107 aa7.55□□□□□ -1.2
RTN3-214ENST00000545432 MT2AP02795 61 aa7.55□□□□□ -1.2
RTN3-214ENST00000545432 HERVK_113P61574 105 aa7.55□□□□□ -1.2
RTN3-214ENST00000545432 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
RTN3-214ENST00000545432 Q6Q795 121 aa7.55□□□□□ -1.2
RTN3-214ENST00000545432 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
RTN3-214ENST00000545432 ELOF1P60002 83 aaKnown RBP7.54□□□□□ -1.2
RTN3-214ENST00000545432 Q1RN00 199 aa7.54□□□□□ -1.2
RTN3-214ENST00000545432 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
RTN3-214ENST00000545432 HSPB8Q9UJY1 196 aa7.54□□□□□ -1.2
RTN3-214ENST00000545432 Q75L30 129 aa7.53□□□□□ -1.2
RTN3-214ENST00000545432 TAL2Q16559 108 aa7.52□□□□□ -1.21
RTN3-214ENST00000545432 C20orf202A1L168 122 aa7.51□□□□□ -1.21
RTN3-214ENST00000545432 SERF1AO75920 110 aa7.51□□□□□ -1.21
RTN3-214ENST00000545432 DPM2O94777 84 aa7.51□□□□□ -1.21
RTN3-214ENST00000545432 TRGC2P03986 189 aa7.51□□□□□ -1.21
RTN3-214ENST00000545432 IGLV5-48A0A075B6I7 105 aa7.5□□□□□ -1.21
RTN3-214ENST00000545432 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
RTN3-214ENST00000545432 ATP11AUNQ6ZP68 121 aa7.5□□□□□ -1.21
RTN3-214ENST00000545432 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
RTN3-214ENST00000545432 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
RTN3-214ENST00000545432 COX7BP24311 80 aa7.49□□□□□ -1.21
RTN3-214ENST00000545432 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
RTN3-214ENST00000545432 TCL1BO95988 128 aa7.48□□□□□ -1.21
RTN3-214ENST00000545432 IGKCP01834 107 aa7.48□□□□□ -1.21
RTN3-214ENST00000545432 MT1FP04733 61 aa7.48□□□□□ -1.21
RTN3-214ENST00000545432 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
RTN3-214ENST00000545432 SPANXDQ9BXN6 97 aa7.48□□□□□ -1.21
RTN3-214ENST00000545432 FABP4P15090 132 aa7.47□□□□□ -1.21
RTN3-214ENST00000545432 NPC2P61916 151 aa7.47□□□□□ -1.21
RTN3-214ENST00000545432 LITAFQ99732 161 aa7.47□□□□□ -1.21
RTN3-214ENST00000545432 TRBV7-6A0A0J9YX20 115 aa7.46□□□□□ -1.22
RTN3-214ENST00000545432 LINC00310P59036 64 aa7.46□□□□□ -1.22
RTN3-214ENST00000545432 C6orf99Q4VX62 202 aa7.46□□□□□ -1.22
RTN3-214ENST00000545432 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.22
RTN3-214ENST00000545432 OR13C6PQ8NH95 151 aa7.45□□□□□ -1.22
RTN3-214ENST00000545432 KRTAP19-6Q3LI70 58 aa7.44□□□□□ -1.22
RTN3-214ENST00000545432 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
RTN3-214ENST00000545432 E9PLD3 99 aa7.42□□□□□ -1.22
RTN3-214ENST00000545432 TIMM17BO60830 172 aa7.41□□□□□ -1.22
RTN3-214ENST00000545432 LINC00518Q8N0U6 118 aa7.41□□□□□ -1.22
RTN3-214ENST00000545432 OBSCN-AS1Q96MR7 158 aa7.41□□□□□ -1.22
RTN3-214ENST00000545432 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.22
RTN3-214ENST00000545432 A0A1B0GWB2 263 aa7.39□□□□□ -1.23
RTN3-214ENST00000545432 COLCA2A8K830 154 aa7.39□□□□□ -1.23
RTN3-214ENST00000545432 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
RTN3-214ENST00000545432 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
RTN3-214ENST00000545432 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
RTN3-214ENST00000545432 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
RTN3-214ENST00000545432 A8MUU9 505 aa7.36□□□□□ -1.23
RTN3-214ENST00000545432 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
RTN3-214ENST00000545432 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
RTN3-214ENST00000545432 TRBV7-7A0A0K0K1E9 115 aa7.34□□□□□ -1.23
RTN3-214ENST00000545432 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
RTN3-214ENST00000545432 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
RTN3-214ENST00000545432 A4D1N5 150 aa7.33□□□□□ -1.24
RTN3-214ENST00000545432 ZNF815PA8K554 130 aa7.33□□□□□ -1.24
RTN3-214ENST00000545432 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms