RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 LAMTOR3Q9UHA4 124 aa8.18□□□□□ -1.1
LRTOMT-221ENST00000544409 CAMK2N2Q96S95 79 aa8.17□□□□□ -1.1
LRTOMT-221ENST00000544409 BCE1O60756 84 aa8.17□□□□□ -1.1
LRTOMT-221ENST00000544409 KRTAP26-1Q6PEX3 210 aa8.16□□□□□ -1.1
LRTOMT-221ENST00000544409 Q6ZQT0 140 aa8.16□□□□□ -1.1
LRTOMT-221ENST00000544409 DEFB131BA0A096LNP1 70 aa8.16□□□□□ -1.1
LRTOMT-221ENST00000544409 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
LRTOMT-221ENST00000544409 C11orf45Q8TAV5 145 aa8.16□□□□□ -1.1
LRTOMT-221ENST00000544409 NDUFC1O43677 76 aa8.14□□□□□ -1.11
LRTOMT-221ENST00000544409 TRBV7-4A0A0J9YYF1 115 aa8.14□□□□□ -1.11
LRTOMT-221ENST00000544409 LINC01556Q5JQF7 62 aa8.14□□□□□ -1.11
LRTOMT-221ENST00000544409 C15orf56Q8N910 161 aa8.14□□□□□ -1.11
LRTOMT-221ENST00000544409 Q6ZRU5 148 aa8.13□□□□□ -1.11
LRTOMT-221ENST00000544409 TMEM254Q8TBM7 123 aa8.13□□□□□ -1.11
LRTOMT-221ENST00000544409 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
LRTOMT-221ENST00000544409 NREPQ16612 68 aa8.12□□□□□ -1.11
LRTOMT-221ENST00000544409 IGKV2D-24A0A075B6R9 120 aa8.11□□□□□ -1.11
LRTOMT-221ENST00000544409 H3BQ85 93 aa8.1□□□□□ -1.11
LRTOMT-221ENST00000544409 VPREB1P12018 145 aa8.1□□□□□ -1.11
LRTOMT-221ENST00000544409 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
LRTOMT-221ENST00000544409 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
LRTOMT-221ENST00000544409 CMYA5Q8N3K9 4069 aa8.1□□□□□ -1.11
LRTOMT-221ENST00000544409 ZNF73O43830 326 aaPredicted RBP8.1□□□□□ -1.11
LRTOMT-221ENST00000544409 M0R378 163 aa8.09□□□□□ -1.11
LRTOMT-221ENST00000544409 COX7BP24311 80 aa8.09□□□□□ -1.11
LRTOMT-221ENST00000544409 Q6ZQY7 126 aa8.09□□□□□ -1.11
LRTOMT-221ENST00000544409 BPY2O14599 106 aa8.08□□□□□ -1.12
LRTOMT-221ENST00000544409 CXCL6P80162 114 aa8.08□□□□□ -1.12
LRTOMT-221ENST00000544409 LOC110117498A0A087WWA1 95 aa8.08□□□□□ -1.12
LRTOMT-221ENST00000544409 Q8N9L7 120 aa8.08□□□□□ -1.12
LRTOMT-221ENST00000544409 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
LRTOMT-221ENST00000544409 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
LRTOMT-221ENST00000544409 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
LRTOMT-221ENST00000544409 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
LRTOMT-221ENST00000544409 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
LRTOMT-221ENST00000544409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
LRTOMT-221ENST00000544409 Q6ZRP5 223 aa8.05□□□□□ -1.12
LRTOMT-221ENST00000544409 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
LRTOMT-221ENST00000544409 DNAH3Q8TD57 4116 aa8.05□□□□□ -1.12
LRTOMT-221ENST00000544409 ANK2Q01484 3957 aa8.05□□□□□ -1.12
LRTOMT-221ENST00000544409 STAB1Q9NY15 2570 aa8.04□□□□□ -1.12
LRTOMT-221ENST00000544409 PRYO14603 147 aa8.04□□□□□ -1.12
LRTOMT-221ENST00000544409 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
LRTOMT-221ENST00000544409 PDE6GP18545 87 aa8.03□□□□□ -1.12
LRTOMT-221ENST00000544409 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.12
LRTOMT-221ENST00000544409 PKD1L1Q8TDX9 2849 aa8.02□□□□□ -1.12
LRTOMT-221ENST00000544409 LINC00588Q9Y4M8 146 aa8.02□□□□□ -1.13
LRTOMT-221ENST00000544409 PRB2P02812 416 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-221ENST00000544409 LINC00528Q8N1L1 170 aa8.01□□□□□ -1.13
LRTOMT-221ENST00000544409 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
LRTOMT-221ENST00000544409 PSPHP1O15172 72 aa8□□□□□ -1.13
LRTOMT-221ENST00000544409 PRR15Q8IV56 129 aa8□□□□□ -1.13
LRTOMT-221ENST00000544409 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
LRTOMT-221ENST00000544409 K7EIL1 84 aa7.98□□□□□ -1.13
LRTOMT-221ENST00000544409 ERC2-IT1O76042 136 aa7.98□□□□□ -1.13
LRTOMT-221ENST00000544409 SERTAD4-AS1Q5TG53 156 aa7.98□□□□□ -1.13
LRTOMT-221ENST00000544409 OCR1Q9BZK8 76 aa7.98□□□□□ -1.13
LRTOMT-221ENST00000544409 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
LRTOMT-221ENST00000544409 C7orf33Q8WU49 177 aa7.97□□□□□ -1.13
LRTOMT-221ENST00000544409 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.13
LRTOMT-221ENST00000544409 CASC10Q5T4H9 136 aa7.96□□□□□ -1.14
LRTOMT-221ENST00000544409 COL6A5A8TX70 2615 aa7.95□□□□□ -1.14
LRTOMT-221ENST00000544409 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
LRTOMT-221ENST00000544409 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
LRTOMT-221ENST00000544409 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
LRTOMT-221ENST00000544409 NOTCH1P46531 2555 aa7.93□□□□□ -1.14
LRTOMT-221ENST00000544409 C1orf64Q8NEQ6 169 aa7.93□□□□□ -1.14
LRTOMT-221ENST00000544409 IGLV5-37A0A075B6J1 123 aa7.92□□□□□ -1.14
LRTOMT-221ENST00000544409 HUWE1Q7Z6Z7 4374 aaKnown RBP7.92□□□□□ -1.14
LRTOMT-221ENST00000544409 PRR4Q16378 134 aa7.92□□□□□ -1.14
LRTOMT-221ENST00000544409 A8MU10 97 aa7.91□□□□□ -1.14
LRTOMT-221ENST00000544409 C3orf84H3BNL1 204 aa7.91□□□□□ -1.14
LRTOMT-221ENST00000544409 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
LRTOMT-221ENST00000544409 Q1T7F1 81 aa7.9□□□□□ -1.14
LRTOMT-221ENST00000544409 RPL37AP8A6NKH3 93 aa7.9□□□□□ -1.14
LRTOMT-221ENST00000544409 DHRS4-AS1Q9P1J3 65 aa7.9□□□□□ -1.14
LRTOMT-221ENST00000544409 DNAH1Q9P2D7 4330 aa7.9□□□□□ -1.15
LRTOMT-221ENST00000544409 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
LRTOMT-221ENST00000544409 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
LRTOMT-221ENST00000544409 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
LRTOMT-221ENST00000544409 Q6ZRX8 168 aa7.89□□□□□ -1.15
LRTOMT-221ENST00000544409 DEFB105AQ8NG35 78 aa7.89□□□□□ -1.15
LRTOMT-221ENST00000544409 SMIM29Q86T20 159 aa7.88□□□□□ -1.15
LRTOMT-221ENST00000544409 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
LRTOMT-221ENST00000544409 SPRR1AP35321 89 aa7.87□□□□□ -1.15
LRTOMT-221ENST00000544409 Q8N377 158 aa7.87□□□□□ -1.15
LRTOMT-221ENST00000544409 CD164Q04900 197 aa7.87□□□□□ -1.15
LRTOMT-221ENST00000544409 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
LRTOMT-221ENST00000544409 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
LRTOMT-221ENST00000544409 A8MUN3 132 aa7.86□□□□□ -1.15
LRTOMT-221ENST00000544409 Q9BRP9 147 aa7.85□□□□□ -1.15
LRTOMT-221ENST00000544409 NBEAL1Q6ZS30 2694 aa7.84□□□□□ -1.15
LRTOMT-221ENST00000544409 IGLV5-48A0A075B6I7 105 aa7.83□□□□□ -1.16
LRTOMT-221ENST00000544409 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
LRTOMT-221ENST00000544409 KRTAP1-5Q9BYS1 174 aa7.82□□□□□ -1.16
LRTOMT-221ENST00000544409 PSCAO43653 123 aa7.81□□□□□ -1.16
LRTOMT-221ENST00000544409 REG3GQ6UW15 175 aa7.81□□□□□ -1.16
LRTOMT-221ENST00000544409 UBE2BP63146 152 aa7.81□□□□□ -1.16
LRTOMT-221ENST00000544409 ST20-AS1Q8NBB2 130 aa7.8□□□□□ -1.16
LRTOMT-221ENST00000544409 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms