RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PRLHP81277 87 aa8.84□□□□□ -0.99
TNFRSF1A-216ENST00000543995 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
TNFRSF1A-216ENST00000543995 CEND1Q8N111 149 aa8.83□□□□□ -1
TNFRSF1A-216ENST00000543995 SPRR1AP35321 89 aa8.82□□□□□ -1
TNFRSF1A-216ENST00000543995 DIRC1Q969H9 104 aa8.82□□□□□ -1
TNFRSF1A-216ENST00000543995 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
TNFRSF1A-216ENST00000543995 HSD52Q0P140 79 aa8.81□□□□□ -1
TNFRSF1A-216ENST00000543995 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
TNFRSF1A-216ENST00000543995 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
TNFRSF1A-216ENST00000543995 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
TNFRSF1A-216ENST00000543995 CTAG1AP78358 180 aa8.8□□□□□ -1
TNFRSF1A-216ENST00000543995 TMEM238LA0A1B0GVL6 79 aa8.8□□□□□ -1
TNFRSF1A-216ENST00000543995 A6NJY4 79 aa8.8□□□□□ -1
TNFRSF1A-216ENST00000543995 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
TNFRSF1A-216ENST00000543995 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
TNFRSF1A-216ENST00000543995 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
TNFRSF1A-216ENST00000543995 H0Y9J4 135 aa8.79□□□□□ -1
TNFRSF1A-216ENST00000543995 RAB37Q96AX2 223 aa8.78□□□□□ -1
TNFRSF1A-216ENST00000543995 HIGD2AQ9BW72 106 aa8.78□□□□□ -1
TNFRSF1A-216ENST00000543995 B5MCH6 92 aa8.77□□□□□ -1.01
TNFRSF1A-216ENST00000543995 CFC1BP0CG36 223 aa8.77□□□□□ -1.01
TNFRSF1A-216ENST00000543995 CFC1P0CG37 223 aa8.77□□□□□ -1.01
TNFRSF1A-216ENST00000543995 RPL13AP40429 203 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1A-216ENST00000543995 FXYD2P54710 66 aa8.77□□□□□ -1.01
TNFRSF1A-216ENST00000543995 C6orf99Q4VX62 202 aa8.77□□□□□ -1.01
TNFRSF1A-216ENST00000543995 ABCA13Q86UQ4 5058 aa8.76□□□□□ -1.01
TNFRSF1A-216ENST00000543995 Q6ZRX8 168 aa8.75□□□□□ -1.01
TNFRSF1A-216ENST00000543995 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
TNFRSF1A-216ENST00000543995 A0A0B4J2C4 111 aa8.75□□□□□ -1.01
TNFRSF1A-216ENST00000543995 H7C2G1 150 aa8.74□□□□□ -1.01
TNFRSF1A-216ENST00000543995 BVES-AS1Q5T3Y7 98 aa8.74□□□□□ -1.01
TNFRSF1A-216ENST00000543995 FLG2Q5D862 2391 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF1A-216ENST00000543995 COX7BP24311 80 aa8.73□□□□□ -1.01
TNFRSF1A-216ENST00000543995 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
TNFRSF1A-216ENST00000543995 Q9BRP9 147 aa8.72□□□□□ -1.01
TNFRSF1A-216ENST00000543995 NHP2Q9NX24 153 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-216ENST00000543995 ELOF1P60002 83 aaKnown RBP8.71□□□□□ -1.01
TNFRSF1A-216ENST00000543995 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.01
TNFRSF1A-216ENST00000543995 TRBV7-6A0A0J9YX20 115 aa8.7□□□□□ -1.02
TNFRSF1A-216ENST00000543995 OXTP01178 125 aa8.7□□□□□ -1.02
TNFRSF1A-216ENST00000543995 Q1RN00 199 aa8.7□□□□□ -1.02
TNFRSF1A-216ENST00000543995 A0A1B0GWB2 263 aa8.7□□□□□ -1.02
TNFRSF1A-216ENST00000543995 VAMP3Q15836 100 aa8.7□□□□□ -1.02
TNFRSF1A-216ENST00000543995 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-216ENST00000543995 K7ERJ3 54 aa8.69□□□□□ -1.02
TNFRSF1A-216ENST00000543995 M0R143 59 aa8.69□□□□□ -1.02
TNFRSF1A-216ENST00000543995 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
TNFRSF1A-216ENST00000543995 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
TNFRSF1A-216ENST00000543995 LINC01600Q96MT4 127 aa8.68□□□□□ -1.02
TNFRSF1A-216ENST00000543995 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
TNFRSF1A-216ENST00000543995 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-216ENST00000543995 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
TNFRSF1A-216ENST00000543995 J3QL48 77 aa8.67□□□□□ -1.02
TNFRSF1A-216ENST00000543995 BATFQ16520 125 aa8.66□□□□□ -1.02
TNFRSF1A-216ENST00000543995 SPRR4Q96PI1 79 aa8.65□□□□□ -1.02
TNFRSF1A-216ENST00000543995 SNHG12Q9BXW3 62 aa8.65□□□□□ -1.02
TNFRSF1A-216ENST00000543995 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
TNFRSF1A-216ENST00000543995 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
TNFRSF1A-216ENST00000543995 SLC25A20O43772 301 aa8.64□□□□□ -1.03
TNFRSF1A-216ENST00000543995 GAGE2AQ6NT46 116 aa8.64□□□□□ -1.03
TNFRSF1A-216ENST00000543995 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
TNFRSF1A-216ENST00000543995 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
TNFRSF1A-216ENST00000543995 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
TNFRSF1A-216ENST00000543995 LRP1Q07954 4544 aaKnown RBP8.62□□□□□ -1.03
TNFRSF1A-216ENST00000543995 CRYGAP11844 174 aa8.62□□□□□ -1.03
TNFRSF1A-216ENST00000543995 PSMB2P49721 201 aa8.62□□□□□ -1.03
TNFRSF1A-216ENST00000543995 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
TNFRSF1A-216ENST00000543995 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
TNFRSF1A-216ENST00000543995 A0A087X002 238 aa8.6□□□□□ -1.03
TNFRSF1A-216ENST00000543995 TSPAN13O95857 204 aa8.6□□□□□ -1.03
TNFRSF1A-216ENST00000543995 hADV29S1A0JD25 119 aa8.59□□□□□ -1.03
TNFRSF1A-216ENST00000543995 H0YGX0 51 aa8.59□□□□□ -1.03
TNFRSF1A-216ENST00000543995 TRIAP1O43715 76 aa8.59□□□□□ -1.03
TNFRSF1A-216ENST00000543995 MT1HL1P0DM35 61 aa8.59□□□□□ -1.03
TNFRSF1A-216ENST00000543995 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
TNFRSF1A-216ENST00000543995 KRTAP10-8P60410 259 aa8.58□□□□□ -1.04
TNFRSF1A-216ENST00000543995 LINC00483Q53H64 154 aa8.58□□□□□ -1.04
TNFRSF1A-216ENST00000543995 SNCGO76070 127 aa8.57□□□□□ -1.04
TNFRSF1A-216ENST00000543995 COX6CP09669 75 aa8.57□□□□□ -1.04
TNFRSF1A-216ENST00000543995 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
TNFRSF1A-216ENST00000543995 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
TNFRSF1A-216ENST00000543995 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 TAX1BP3O14907 124 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 Q6ZQY7 126 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 C3orf22Q8N5N4 141 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 FAM218AQ96MZ4 157 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 CLEC2BQ92478 149 aa8.54□□□□□ -1.04
TNFRSF1A-216ENST00000543995 TNXBP22105 4242 aa8.53□□□□□ -1.04
TNFRSF1A-216ENST00000543995 SPRR1BP22528 89 aa8.53□□□□□ -1.04
TNFRSF1A-216ENST00000543995 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-216ENST00000543995 IGLV5-48A0A075B6I7 105 aa8.52□□□□□ -1.05
TNFRSF1A-216ENST00000543995 LAMTOR3Q9UHA4 124 aa8.52□□□□□ -1.05
TNFRSF1A-216ENST00000543995 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
TNFRSF1A-216ENST00000543995 A0A1B0GX51 115 aa8.5□□□□□ -1.05
TNFRSF1A-216ENST00000543995 LINC01547P58512 204 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF1A-216ENST00000543995 MOBPQ13875 183 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms