RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 A4D1N5 150 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 H0Y9J4 135 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 IGLV6-57P01721 117 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 RAB37Q96AX2 223 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 PRO1933Q9H354 126 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 PPDPFQ9H3Y8 114 aa3.85□□□□□ -1.79
LTBR-212ENST00000543542 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 LOC105371267A0A1B0GV96 52 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 TMEM238LA0A1B0GVL6 79 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 A6NJY4 79 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 ZNF73O43830 326 aaPredicted RBP3.84□□□□□ -1.79
LTBR-212ENST00000543542 TAL2Q16559 108 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 C2orf91Q6ZV80 131 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 CEND1Q8N111 149 aa3.84□□□□□ -1.79
LTBR-212ENST00000543542 B5MCH6 92 aa3.83□□□□□ -1.8
LTBR-212ENST00000543542 H7C2G1 150 aa3.83□□□□□ -1.8
LTBR-212ENST00000543542 OXTP01178 125 aa3.83□□□□□ -1.8
LTBR-212ENST00000543542 SPRR1AP35321 89 aa3.83□□□□□ -1.8
LTBR-212ENST00000543542 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
LTBR-212ENST00000543542 HSD52Q0P140 79 aa3.83□□□□□ -1.8
LTBR-212ENST00000543542 C6orf99Q4VX62 202 aa3.83□□□□□ -1.8
LTBR-212ENST00000543542 TSTD3H0UI37 97 aa3.82□□□□□ -1.8
LTBR-212ENST00000543542 COX7BP24311 80 aa3.82□□□□□ -1.8
LTBR-212ENST00000543542 VAMP3Q15836 100 aa3.82□□□□□ -1.8
LTBR-212ENST00000543542 Q1RN00 199 aa3.82□□□□□ -1.8
LTBR-212ENST00000543542 SMCR5Q8TEV8 140 aa3.82□□□□□ -1.8
LTBR-212ENST00000543542 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
LTBR-212ENST00000543542 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
LTBR-212ENST00000543542 Q6ZRX8 168 aa3.81□□□□□ -1.8
LTBR-212ENST00000543542 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
LTBR-212ENST00000543542 SMIM11BQ8TCY0 68 aa3.81□□□□□ -1.8
LTBR-212ENST00000543542 A0A0B4J2C4 111 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 A0A1B0GWB2 263 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 KRTAP4-16G5E9R7 235 aaPredicted RBP3.8□□□□□ -1.8
LTBR-212ENST00000543542 SLC25A20O43772 301 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 CFC1P0CG37 223 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 FXYD2P54710 66 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 LINC01600Q96MT4 127 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 NHP2Q9NX24 153 aaKnown RBP3.8□□□□□ -1.8
LTBR-212ENST00000543542 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
LTBR-212ENST00000543542 TRBV7-6A0A0J9YX20 115 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 CRYGAP11844 174 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 ELOF1P60002 83 aaKnown RBP3.79□□□□□ -1.8
LTBR-212ENST00000543542 CTAG1AP78358 180 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 BVES-AS1Q5T3Y7 98 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 Q9BRP9 147 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 ANAPC11Q9NYG5 84 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 PRO1854Q9UHT4 67 aa3.79□□□□□ -1.8
LTBR-212ENST00000543542 M0R143 59 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 SNCGO76070 127 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 PSMB2P49721 201 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 DEFB105AQ8NG35 78 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 SPRR4Q96PI1 79 aa3.78□□□□□ -1.8
LTBR-212ENST00000543542 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
LTBR-212ENST00000543542 K7ERJ3 54 aa3.77□□□□□ -1.81
LTBR-212ENST00000543542 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
LTBR-212ENST00000543542 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
LTBR-212ENST00000543542 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
LTBR-212ENST00000543542 IGLV9-49A0A0B4J1Y8 123 aa3.76□□□□□ -1.81
LTBR-212ENST00000543542 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
LTBR-212ENST00000543542 BATFQ16520 125 aa3.76□□□□□ -1.81
LTBR-212ENST00000543542 ST20-AS1Q8NBB2 130 aa3.76□□□□□ -1.81
LTBR-212ENST00000543542 FLG2Q5D862 2391 aaPredicted RBP3.76□□□□□ -1.81
LTBR-212ENST00000543542 A0A087X002 238 aa3.75□□□□□ -1.81
LTBR-212ENST00000543542 H0YGX0 51 aa3.75□□□□□ -1.81
LTBR-212ENST00000543542 COX6CP09669 75 aa3.75□□□□□ -1.81
LTBR-212ENST00000543542 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
LTBR-212ENST00000543542 C9orf153Q5TBE3 101 aa3.75□□□□□ -1.81
LTBR-212ENST00000543542 LINC00575Q6W349 94 aa3.75□□□□□ -1.81
LTBR-212ENST00000543542 TEX49A0A1B0GTD5 131 aa3.74□□□□□ -1.81
LTBR-212ENST00000543542 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
LTBR-212ENST00000543542 SCGB1C2P0DMR2 95 aa3.74□□□□□ -1.81
LTBR-212ENST00000543542 C4orf48Q5BLP8 95 aa3.74□□□□□ -1.81
LTBR-212ENST00000543542 C3orf22Q8N5N4 141 aa3.74□□□□□ -1.81
LTBR-212ENST00000543542 LAMTOR3Q9UHA4 124 aa3.74□□□□□ -1.81
LTBR-212ENST00000543542 TRIAP1O43715 76 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 TSPAN13O95857 204 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 DNAL4O96015 105 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 MOBPQ13875 183 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 KRTAP13-2Q52LG2 175 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 Q6ZQY7 126 aa3.73□□□□□ -1.81
LTBR-212ENST00000543542 F8WEM9 126 aa3.72□□□□□ -1.81
LTBR-212ENST00000543542 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.72□□□□□ -1.81
LTBR-212ENST00000543542 LINC00304Q8N9R0 145 aa3.72□□□□□ -1.81
LTBR-212ENST00000543542 CLEC2BQ92478 149 aa3.72□□□□□ -1.81
LTBR-212ENST00000543542 PCP4L1A6NKN8 68 aa3.71□□□□□ -1.82
LTBR-212ENST00000543542 GHRHP01286 108 aa3.71□□□□□ -1.82
LTBR-212ENST00000543542 SPRR1BP22528 89 aa3.71□□□□□ -1.82
LTBR-212ENST00000543542 Q8NBF4 154 aa3.71□□□□□ -1.82
LTBR-212ENST00000543542 SNHG12Q9BXW3 62 aa3.71□□□□□ -1.82
LTBR-212ENST00000543542 TNXBP22105 4242 aa3.71□□□□□ -1.82
LTBR-212ENST00000543542 IGLV5-48A0A075B6I7 105 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms