RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 PSMB2P49721 201 aa7.33□□□□□ -1.24
SRGAP1-205ENST00000542841 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-205ENST00000542841 GAGE2BQ13066 116 aa7.33□□□□□ -1.24
SRGAP1-205ENST00000542841 S100A7L2Q5SY68 101 aa7.33□□□□□ -1.24
SRGAP1-205ENST00000542841 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
SRGAP1-205ENST00000542841 IGLV6-57P01721 117 aa7.32□□□□□ -1.24
SRGAP1-205ENST00000542841 VAMP3Q15836 100 aa7.32□□□□□ -1.24
SRGAP1-205ENST00000542841 GTF2H5Q6ZYL4 71 aa7.32□□□□□ -1.24
SRGAP1-205ENST00000542841 NKAPP1Q8N9T2 125 aa7.32□□□□□ -1.24
SRGAP1-205ENST00000542841 OR13C6PQ8NH95 151 aa7.32□□□□□ -1.24
SRGAP1-205ENST00000542841 A0A096LNI7 61 aa7.31□□□□□ -1.24
SRGAP1-205ENST00000542841 H7C2G1 150 aa7.31□□□□□ -1.24
SRGAP1-205ENST00000542841 NCR3O14931 201 aa7.31□□□□□ -1.24
SRGAP1-205ENST00000542841 SDIM1Q6ZPB5 146 aa7.31□□□□□ -1.24
SRGAP1-205ENST00000542841 Q8NDZ9 215 aa7.31□□□□□ -1.24
SRGAP1-205ENST00000542841 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
SRGAP1-205ENST00000542841 K7EP34 96 aa7.3□□□□□ -1.24
SRGAP1-205ENST00000542841 TRIAP1O43715 76 aa7.3□□□□□ -1.24
SRGAP1-205ENST00000542841 SCGB1C2P0DMR2 95 aa7.3□□□□□ -1.24
SRGAP1-205ENST00000542841 NAA38Q9BRA0 125 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-205ENST00000542841 PKHD1L1Q86WI1 4243 aa7.29□□□□□ -1.24
SRGAP1-205ENST00000542841 GAGE10A6NGK3 116 aa7.29□□□□□ -1.24
SRGAP1-205ENST00000542841 H0YGX0 51 aa7.29□□□□□ -1.24
SRGAP1-205ENST00000542841 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
SRGAP1-205ENST00000542841 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-205ENST00000542841 SMIM11BQ8TCY0 68 aa7.29□□□□□ -1.24
SRGAP1-205ENST00000542841 LRP2P98164 4655 aa7.28□□□□□ -1.24
SRGAP1-205ENST00000542841 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
SRGAP1-205ENST00000542841 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
SRGAP1-205ENST00000542841 TRBV10-3A0A0K0K1G6 114 aa7.27□□□□□ -1.25
SRGAP1-205ENST00000542841 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 TRBV7-6A0A0J9YX20 115 aa7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 A0A1B0GX51 115 aa7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 MRPL55Q7Z7F7 128 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 C7orf33Q8WU49 177 aa7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
SRGAP1-205ENST00000542841 PRYO14603 147 aa7.25□□□□□ -1.25
SRGAP1-205ENST00000542841 TCL1BO95988 128 aa7.25□□□□□ -1.25
SRGAP1-205ENST00000542841 SPACA4Q8TDM5 124 aa7.25□□□□□ -1.25
SRGAP1-205ENST00000542841 KCNQ1DNQ9H478 68 aa7.25□□□□□ -1.25
SRGAP1-205ENST00000542841 IGLV1-50A0A075B6I6 118 aa7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 FAM168BA1KXE4 195 aa7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 M0QXV9 152 aa7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 LST1O00453 97 aa7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 FAM19A5Q7Z5A7 132 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 DIRC1Q969H9 104 aa7.24□□□□□ -1.25
SRGAP1-205ENST00000542841 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-205ENST00000542841 SNCGO76070 127 aa7.23□□□□□ -1.25
SRGAP1-205ENST00000542841 TRACP01848 142 aa7.23□□□□□ -1.25
SRGAP1-205ENST00000542841 C6orf99Q4VX62 202 aa7.23□□□□□ -1.25
SRGAP1-205ENST00000542841 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
SRGAP1-205ENST00000542841 TNXBP22105 4242 aa7.22□□□□□ -1.25
SRGAP1-205ENST00000542841 A0A1W2PNN7 141 aa7.22□□□□□ -1.25
SRGAP1-205ENST00000542841 CHTF8P0CG12 524 aa7.22□□□□□ -1.25
SRGAP1-205ENST00000542841 F8W1H4 67 aa7.21□□□□□ -1.26
SRGAP1-205ENST00000542841 SPRR1AP35321 89 aa7.21□□□□□ -1.26
SRGAP1-205ENST00000542841 H3BMG7 143 aa7.2□□□□□ -1.26
SRGAP1-205ENST00000542841 COX7BP24311 80 aa7.2□□□□□ -1.26
SRGAP1-205ENST00000542841 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-205ENST00000542841 CLEC2BQ92478 149 aa7.2□□□□□ -1.26
SRGAP1-205ENST00000542841 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
SRGAP1-205ENST00000542841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-205ENST00000542841 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
SRGAP1-205ENST00000542841 A0A087WYN8 130 aa7.18□□□□□ -1.26
SRGAP1-205ENST00000542841 SLC25A20O43772 301 aa7.18□□□□□ -1.26
SRGAP1-205ENST00000542841 DNAL4O96015 105 aa7.18□□□□□ -1.26
SRGAP1-205ENST00000542841 DPH3Q96FX2 82 aa7.18□□□□□ -1.26
SRGAP1-205ENST00000542841 RPL37AP8A6NKH3 93 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 H3BQ85 93 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 H3BT86 120 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 PANO1I0J062 215 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 REG3GQ6UW15 175 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
SRGAP1-205ENST00000542841 ETDCA0A1B0GVM5 59 aa7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 C9JAW5 83 aa7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 GHRHP01286 108 aa7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 UBE2BP63146 152 aa7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
SRGAP1-205ENST00000542841 hADV29S1A0JD25 119 aa7.15□□□□□ -1.26
SRGAP1-205ENST00000542841 OCIAD2Q56VL3 154 aa7.15□□□□□ -1.26
SRGAP1-205ENST00000542841 Q6ZRX8 168 aa7.15□□□□□ -1.26
SRGAP1-205ENST00000542841 DHRS4-AS1Q9P1J3 65 aa7.15□□□□□ -1.26
SRGAP1-205ENST00000542841 B5MCH6 92 aa7.14□□□□□ -1.27
SRGAP1-205ENST00000542841 H0Y9J4 135 aa7.14□□□□□ -1.27
SRGAP1-205ENST00000542841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-205ENST00000542841 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
SRGAP1-205ENST00000542841 ORMDL1Q9P0S3 153 aa7.13□□□□□ -1.27
SRGAP1-205ENST00000542841 TMEM256-PLSCR3K7ERE1 68 aa7.1□□□□□ -1.27
SRGAP1-205ENST00000542841 BCE1O60756 84 aa7.1□□□□□ -1.27
SRGAP1-205ENST00000542841 BAALC-AS2P0C853 105 aa7.1□□□□□ -1.27
SRGAP1-205ENST00000542841 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-205ENST00000542841 PPDPFLQ8WWR9 84 aa7.1□□□□□ -1.27
SRGAP1-205ENST00000542841 FAM19A1Q7Z5A9 133 aa7.09□□□□□ -1.27
SRGAP1-205ENST00000542841 TEN1Q86WV5 123 aa7.08□□□□□ -1.28
SRGAP1-205ENST00000542841 MTURNQ8N3F0 131 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms