RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 LCE6AA0A183 80 aa4.5□□□□□ -1.69
EPHA4-214ENST00000541600 JMJD7-PLA2G4BH0Y9G9 81 aa4.5□□□□□ -1.69
EPHA4-214ENST00000541600 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
EPHA4-214ENST00000541600 ORMDL1Q9P0S3 153 aa4.5□□□□□ -1.69
EPHA4-214ENST00000541600 TRBV7-6A0A0J9YX20 115 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 TMEM256-PLSCR3K7ERE1 68 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 ANGP03950 147 aaKnown RBP4.49□□□□□ -1.69
EPHA4-214ENST00000541600 CRYGAP11844 174 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 EGFEM1PQ0D2K5 195 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 LYPD5Q6UWN5 251 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 Q8N814 137 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 C11orf68Q9H3H3 251 aaKnown RBP4.49□□□□□ -1.69
EPHA4-214ENST00000541600 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
EPHA4-214ENST00000541600 LECT2O14960 151 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
EPHA4-214ENST00000541600 Q6JHZ5 121 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 ENHOQ6UWT2 76 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 LINC00575Q6W349 94 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 SMCR5Q8TEV8 140 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 Q9HAA7 133 aa4.48□□□□□ -1.69
EPHA4-214ENST00000541600 PKHD1P08F94 4074 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 HSPG2P98160 4391 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 DNAH11Q96DT5 4516 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 K7EIL1 84 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 CCKP06307 115 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 SPAG11BQ08648 103 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 S100A7L2Q5SY68 101 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 CASC10Q5T4H9 136 aa4.47□□□□□ -1.69
EPHA4-214ENST00000541600 C9orf153Q5TBE3 101 aa4.46□□□□□ -1.7
EPHA4-214ENST00000541600 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
EPHA4-214ENST00000541600 LOC110117498A0A087WWA1 95 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 TRBV10-3A0A0K0K1G6 114 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 DEFB4AO15263 64 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 COX7CP15954 63 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 PDE6GP18545 87 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 TMEM258P61165 79 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
EPHA4-214ENST00000541600 ATP5EP2Q5VTU8 51 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 CLPSL2Q6UWE3 100 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 C6orf223Q8N319 242 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 Q8NDZ9 215 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 KLK12Q9UKR0 248 aa4.45□□□□□ -1.7
EPHA4-214ENST00000541600 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
EPHA4-214ENST00000541600 SLPIP03973 132 aa4.44□□□□□ -1.7
EPHA4-214ENST00000541600 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
EPHA4-214ENST00000541600 C14orf132Q9NPU4 83 aa4.44□□□□□ -1.7
EPHA4-214ENST00000541600 C6orf48Q9UBA6 75 aa4.44□□□□□ -1.7
EPHA4-214ENST00000541600 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
EPHA4-214ENST00000541600 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
EPHA4-214ENST00000541600 BCE1O60756 84 aa4.43□□□□□ -1.7
EPHA4-214ENST00000541600 PRR3P79522 188 aaKnown RBP4.43□□□□□ -1.7
EPHA4-214ENST00000541600 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
EPHA4-214ENST00000541600 LINC01556Q5JQF7 62 aa4.43□□□□□ -1.7
EPHA4-214ENST00000541600 Q5XG85 94 aa4.43□□□□□ -1.7
EPHA4-214ENST00000541600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
EPHA4-214ENST00000541600 LINC00846Q9NV44 126 aa4.43□□□□□ -1.7
EPHA4-214ENST00000541600 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 EPM2AB3EWF7 344 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 C3orf84H3BNL1 204 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 M0R378 163 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 ATOX1O00244 68 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 NCR3O14931 201 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 KRTAP10-11P60412 298 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
EPHA4-214ENST00000541600 NDUFC2-KCTD14E9PQ53 114 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 DNAH10OSP0CZ25 163 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 HTN3P15516 51 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 ESRGQ1W209 222 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 Q6ZQT0 140 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
EPHA4-214ENST00000541600 PKD1P98161 4303 aa4.4□□□□□ -1.7
EPHA4-214ENST00000541600 TRAV23DV6A0A075B6W5 121 aa4.4□□□□□ -1.71
EPHA4-214ENST00000541600 OXTP01178 125 aa4.4□□□□□ -1.71
EPHA4-214ENST00000541600 ELOF1P60002 83 aaKnown RBP4.4□□□□□ -1.71
EPHA4-214ENST00000541600 RBM3P98179 157 aaKnown RBP4.4□□□□□ -1.71
EPHA4-214ENST00000541600 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
EPHA4-214ENST00000541600 WFDC10BQ8IUB3 73 aa4.4□□□□□ -1.71
EPHA4-214ENST00000541600 C15orf56Q8N910 161 aa4.4□□□□□ -1.71
EPHA4-214ENST00000541600 COX7BP24311 80 aa4.39□□□□□ -1.71
EPHA4-214ENST00000541600 UPK3BQ9BT76 320 aa4.39□□□□□ -1.71
EPHA4-214ENST00000541600 APOBP04114 4563 aaKnown RBP4.38□□□□□ -1.71
EPHA4-214ENST00000541600 TRBV7-4A0A0J9YYF1 115 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 ZNF73O43830 326 aaPredicted RBP4.38□□□□□ -1.71
EPHA4-214ENST00000541600 Q6ZRU5 148 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 Q6ZTC4 211 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 B9D2Q9BPU9 175 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms