RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DNAH8Q96JB1 4490 aa17.56■□□□□ 0.4
CCM2-218ENST00000541586 PANO1I0J062 215 aa17.55■□□□□ 0.4
CCM2-218ENST00000541586 MTURNQ8N3F0 131 aa17.55■□□□□ 0.4
CCM2-218ENST00000541586 LINC00167Q96N53 147 aa17.55■□□□□ 0.4
CCM2-218ENST00000541586 HAMPP81172 84 aa17.54■□□□□ 0.4
CCM2-218ENST00000541586 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.54■□□□□ 0.4
CCM2-218ENST00000541586 ZNF73O43830 326 aaPredicted RBP17.53■□□□□ 0.4
CCM2-218ENST00000541586 CBY1Q9Y3M2 126 aa17.53■□□□□ 0.4
CCM2-218ENST00000541586 RPL37AP8A6NKH3 93 aa17.52■□□□□ 0.4
CCM2-218ENST00000541586 M0QXV9 152 aa17.52■□□□□ 0.4
CCM2-218ENST00000541586 PRO0461Q9UI25 63 aa17.52■□□□□ 0.4
CCM2-218ENST00000541586 DIRC1Q969H9 104 aa17.52■□□□□ 0.39
CCM2-218ENST00000541586 KCNQ1DNQ9H478 68 aa17.52■□□□□ 0.39
CCM2-218ENST00000541586 IGLV1-50A0A075B6I6 118 aa17.51■□□□□ 0.39
CCM2-218ENST00000541586 A0A087WYN8 130 aa17.5■□□□□ 0.39
CCM2-218ENST00000541586 SPACA4Q8TDM5 124 aa17.5■□□□□ 0.39
CCM2-218ENST00000541586 C9JAW5 83 aa17.49■□□□□ 0.39
CCM2-218ENST00000541586 F8W1H4 67 aa17.49■□□□□ 0.39
CCM2-218ENST00000541586 Q6ZSA8 131 aa17.49■□□□□ 0.39
CCM2-218ENST00000541586 TRACP01848 142 aa17.47■□□□□ 0.39
CCM2-218ENST00000541586 APOBP04114 4563 aaKnown RBP17.47■□□□□ 0.39
CCM2-218ENST00000541586 SMCPP49901 116 aaPredicted RBP17.44■□□□□ 0.38
CCM2-218ENST00000541586 TRBV7-6A0A0J9YX20 115 aa17.44■□□□□ 0.38
CCM2-218ENST00000541586 PRYO14603 147 aa17.44■□□□□ 0.38
CCM2-218ENST00000541586 XGP55808 180 aa17.44■□□□□ 0.38
CCM2-218ENST00000541586 BIRC6Q9NR09 4857 aa17.42■□□□□ 0.38
CCM2-218ENST00000541586 SLC25A20O43772 301 aa17.42■□□□□ 0.38
CCM2-218ENST00000541586 COX7BP24311 80 aa17.42■□□□□ 0.38
CCM2-218ENST00000541586 ELOF1P60002 83 aaKnown RBP17.42■□□□□ 0.38
CCM2-218ENST00000541586 SCXQ7RTU7 201 aa17.42■□□□□ 0.38
CCM2-218ENST00000541586 PHF5AQ7RTV0 110 aaKnown RBP17.42■□□□□ 0.38
CCM2-218ENST00000541586 CIRBP-AS1Q8TBR5 109 aa17.42■□□□□ 0.38
CCM2-218ENST00000541586 LINC00575Q6W349 94 aa17.41■□□□□ 0.38
CCM2-218ENST00000541586 A0A1B0GX51 115 aa17.39■□□□□ 0.37
CCM2-218ENST00000541586 EPM2AB3EWF7 344 aa17.38■□□□□ 0.37
CCM2-218ENST00000541586 SPRR1AP35321 89 aa17.38■□□□□ 0.37
CCM2-218ENST00000541586 DNAL4O96015 105 aa17.38■□□□□ 0.37
CCM2-218ENST00000541586 CDK2AP2O75956 126 aa17.37■□□□□ 0.37
CCM2-218ENST00000541586 KRTAP4-16G5E9R7 235 aaPredicted RBP17.36■□□□□ 0.37
CCM2-218ENST00000541586 REG3GQ6UW15 175 aa17.35■□□□□ 0.37
CCM2-218ENST00000541586 LINC00528Q8N1L1 170 aa17.35■□□□□ 0.37
CCM2-218ENST00000541586 ANKRD29Q8N6D5 301 aa17.35■□□□□ 0.37
CCM2-218ENST00000541586 KIAA1109Q2LD37 5005 aa17.34■□□□□ 0.37
CCM2-218ENST00000541586 hADV29S1A0JD25 119 aa17.34■□□□□ 0.37
CCM2-218ENST00000541586 UBE2BP63146 152 aa17.34■□□□□ 0.37
CCM2-218ENST00000541586 H3BT86 120 aa17.33■□□□□ 0.37
CCM2-218ENST00000541586 SNCGO76070 127 aa17.33■□□□□ 0.37
CCM2-218ENST00000541586 SMR3BP02814 79 aaPredicted RBP17.33■□□□□ 0.36
CCM2-218ENST00000541586 KRTAP11-1Q8IUC1 163 aa17.33■□□□□ 0.36
CCM2-218ENST00000541586 PLAC8Q9NZF1 115 aa17.33■□□□□ 0.36
CCM2-218ENST00000541586 LINC01600Q96MT4 127 aa17.32■□□□□ 0.36
CCM2-218ENST00000541586 ETDCA0A1B0GVM5 59 aa17.31■□□□□ 0.36
CCM2-218ENST00000541586 ETDBQ3ZM63 59 aa17.31■□□□□ 0.36
CCM2-218ENST00000541586 HSPG2P98160 4391 aa17.3■□□□□ 0.36
CCM2-218ENST00000541586 B5MCH6 92 aa17.3■□□□□ 0.36
CCM2-218ENST00000541586 BAALC-AS2P0C853 105 aa17.3■□□□□ 0.36
CCM2-218ENST00000541586 RYR1P21817 5038 aa17.29■□□□□ 0.36
CCM2-218ENST00000541586 Q6ZRX8 168 aa17.29■□□□□ 0.36
CCM2-218ENST00000541586 ORMDL1Q9P0S3 153 aa17.25■□□□□ 0.35
CCM2-218ENST00000541586 INAFM2P0DMQ5 153 aa17.23■□□□□ 0.35
CCM2-218ENST00000541586 Q6ZQY7 126 aa17.23■□□□□ 0.35
CCM2-218ENST00000541586 TEN1Q86WV5 123 aa17.23■□□□□ 0.35
CCM2-218ENST00000541586 Q9BRP9 147 aa17.22■□□□□ 0.35
CCM2-218ENST00000541586 DHRS4-AS1Q9P1J3 65 aa17.21■□□□□ 0.35
CCM2-218ENST00000541586 FAM19A1Q7Z5A9 133 aa17.2■□□□□ 0.34
CCM2-218ENST00000541586 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.19■□□□□ 0.34
CCM2-218ENST00000541586 FAT1Q14517 4588 aa17.19■□□□□ 0.34
CCM2-218ENST00000541586 PRLHP81277 87 aa17.16■□□□□ 0.34
CCM2-218ENST00000541586 TMEM256-PLSCR3K7ERE1 68 aa17.14■□□□□ 0.33
CCM2-218ENST00000541586 TEX49A0A1B0GTD5 131 aa17.13■□□□□ 0.33
CCM2-218ENST00000541586 BCE1O60756 84 aa17.13■□□□□ 0.33
CCM2-218ENST00000541586 SMCR5Q8TEV8 140 aa17.13■□□□□ 0.33
CCM2-218ENST00000541586 OCIAD2Q56VL3 154 aa17.11■□□□□ 0.33
CCM2-218ENST00000541586 KRTAP17-1Q9BYP8 105 aa17.11■□□□□ 0.33
CCM2-218ENST00000541586 FAM229AH3BQW9 127 aa17.1■□□□□ 0.33
CCM2-218ENST00000541586 ERC2-IT1O76042 136 aa17.1■□□□□ 0.33
CCM2-218ENST00000541586 PPDPFLQ8WWR9 84 aa17.1■□□□□ 0.33
CCM2-218ENST00000541586 VPS13BQ7Z7G8 4022 aa17.09■□□□□ 0.33
CCM2-218ENST00000541586 H0Y9J4 135 aa17.09■□□□□ 0.33
CCM2-218ENST00000541586 PSORS1C2Q9UIG4 136 aa17.09■□□□□ 0.33
CCM2-218ENST00000541586 Q8N1X5 172 aa17.08■□□□□ 0.32
CCM2-218ENST00000541586 H3BQ85 93 aa17.07■□□□□ 0.32
CCM2-218ENST00000541586 UBE2AP49459 152 aa17.07■□□□□ 0.32
CCM2-218ENST00000541586 GHRHP01286 108 aa17.06■□□□□ 0.32
CCM2-218ENST00000541586 HIGD2AQ9BW72 106 aa17.06■□□□□ 0.32
CCM2-218ENST00000541586 Q5VSD8 79 aa17.05■□□□□ 0.32
CCM2-218ENST00000541586 RPL37AP61513 92 aaKnown RBP17.04■□□□□ 0.32
CCM2-218ENST00000541586 KRTAP13-1Q8IUC0 172 aa17.04■□□□□ 0.32
CCM2-218ENST00000541586 ST20-AS1Q8NBB2 130 aa17.04■□□□□ 0.32
CCM2-218ENST00000541586 LINC01547P58512 204 aaPredicted RBP17.02■□□□□ 0.32
CCM2-218ENST00000541586 DEFB105AQ8NG35 78 aa17.02■□□□□ 0.32
CCM2-218ENST00000541586 C1orf137Q5JT78 98 aa17.01■□□□□ 0.31
CCM2-218ENST00000541586 OBSCN-AS1Q96MR7 158 aa17.01■□□□□ 0.31
CCM2-218ENST00000541586 K7ERU9 68 aa17■□□□□ 0.31
CCM2-218ENST00000541586 HERC2O95714 4834 aa17■□□□□ 0.31
CCM2-218ENST00000541586 A0A1B0GV72 72 aa16.99■□□□□ 0.31
CCM2-218ENST00000541586 PLA2G1BP04054 148 aaKnown RBP16.99■□□□□ 0.31
CCM2-218ENST00000541586 Q8N377 158 aa16.99■□□□□ 0.31
CCM2-218ENST00000541586 LAMTOR3Q9UHA4 124 aa16.99■□□□□ 0.31
CCM2-218ENST00000541586 IGLV5-48A0A075B6I7 105 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms