RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 Q6ZVQ6 151 aa7.07□□□□□ -1.28
CHFR-219ENST00000541341 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
CHFR-219ENST00000541341 HERC2O95714 4834 aa7.06□□□□□ -1.28
CHFR-219ENST00000541341 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
CHFR-219ENST00000541341 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
CHFR-219ENST00000541341 CHCHD10Q8WYQ3 142 aaPredicted RBP7.06□□□□□ -1.28
CHFR-219ENST00000541341 H7BZZ5 65 aa7.05□□□□□ -1.28
CHFR-219ENST00000541341 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
CHFR-219ENST00000541341 REG3AQ06141 175 aa7.05□□□□□ -1.28
CHFR-219ENST00000541341 HECTD4Q9Y4D8 3996 aa7.04□□□□□ -1.28
CHFR-219ENST00000541341 COX7BP24311 80 aa7.04□□□□□ -1.28
CHFR-219ENST00000541341 DEFB135Q30KP9 77 aa7.04□□□□□ -1.28
CHFR-219ENST00000541341 Q5XG85 94 aa7.04□□□□□ -1.28
CHFR-219ENST00000541341 FAM19A1Q7Z5A9 133 aa7.04□□□□□ -1.28
CHFR-219ENST00000541341 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
CHFR-219ENST00000541341 ANGP03950 147 aaKnown RBP7.03□□□□□ -1.28
CHFR-219ENST00000541341 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CHFR-219ENST00000541341 C11orf68Q9H3H3 251 aaKnown RBP7.03□□□□□ -1.28
CHFR-219ENST00000541341 DEFB130BP0DP73 79 aa7.02□□□□□ -1.29
CHFR-219ENST00000541341 DEFB130AP0DP74 79 aa7.02□□□□□ -1.29
CHFR-219ENST00000541341 MIFP14174 115 aa7.02□□□□□ -1.29
CHFR-219ENST00000541341 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
CHFR-219ENST00000541341 LELP1Q5T871 98 aa7.01□□□□□ -1.29
CHFR-219ENST00000541341 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
CHFR-219ENST00000541341 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
CHFR-219ENST00000541341 M0R378 163 aa7□□□□□ -1.29
CHFR-219ENST00000541341 ZNF73O43830 326 aaPredicted RBP7□□□□□ -1.29
CHFR-219ENST00000541341 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
CHFR-219ENST00000541341 Q6ZQY7 126 aa7□□□□□ -1.29
CHFR-219ENST00000541341 Q8N3U1 123 aa7□□□□□ -1.29
CHFR-219ENST00000541341 X6R8D5 127 aa7□□□□□ -1.29
CHFR-219ENST00000541341 NUPR2A6NF83 97 aa6.99□□□□□ -1.29
CHFR-219ENST00000541341 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
CHFR-219ENST00000541341 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
CHFR-219ENST00000541341 F8WEM9 126 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 BPY2O14599 106 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 DEFB4AO15263 64 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 NREPQ16612 68 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 HIGD2BQ4VC39 106 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 PRR34Q9NV39 138 aa6.98□□□□□ -1.29
CHFR-219ENST00000541341 DAD1P61803 113 aa6.97□□□□□ -1.29
CHFR-219ENST00000541341 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
CHFR-219ENST00000541341 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
CHFR-219ENST00000541341 H3BNG1 76 aa6.96□□□□□ -1.3
CHFR-219ENST00000541341 Q8NAQ8 132 aa6.96□□□□□ -1.3
CHFR-219ENST00000541341 SPART-AS1P0CW21 52 aa6.95□□□□□ -1.3
CHFR-219ENST00000541341 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHFR-219ENST00000541341 OXTP01178 125 aa6.94□□□□□ -1.3
CHFR-219ENST00000541341 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
CHFR-219ENST00000541341 DHRS4-AS1Q9P1J3 65 aa6.94□□□□□ -1.3
CHFR-219ENST00000541341 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
CHFR-219ENST00000541341 RYR1P21817 5038 aa6.93□□□□□ -1.3
CHFR-219ENST00000541341 PRYO14603 147 aa6.93□□□□□ -1.3
CHFR-219ENST00000541341 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
CHFR-219ENST00000541341 NDUFB1O75438 58 aa6.92□□□□□ -1.3
CHFR-219ENST00000541341 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
CHFR-219ENST00000541341 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
CHFR-219ENST00000541341 V9GYY9 64 aa6.92□□□□□ -1.3
CHFR-219ENST00000541341 TRAV10A0A0B4J240 114 aa6.91□□□□□ -1.3
CHFR-219ENST00000541341 CLPSL2Q6UWE3 100 aa6.91□□□□□ -1.3
CHFR-219ENST00000541341 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
CHFR-219ENST00000541341 ESRGQ1W209 222 aa6.9□□□□□ -1.3
CHFR-219ENST00000541341 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
CHFR-219ENST00000541341 RMI2Q96E14 147 aa6.9□□□□□ -1.3
CHFR-219ENST00000541341 CAMK2N2Q96S95 79 aa6.9□□□□□ -1.3
CHFR-219ENST00000541341 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.31
CHFR-219ENST00000541341 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
CHFR-219ENST00000541341 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
CHFR-219ENST00000541341 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
CHFR-219ENST00000541341 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
CHFR-219ENST00000541341 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
CHFR-219ENST00000541341 PKD1P98161 4303 aa6.88□□□□□ -1.31
CHFR-219ENST00000541341 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
CHFR-219ENST00000541341 VPREB1P12018 145 aa6.88□□□□□ -1.31
CHFR-219ENST00000541341 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
CHFR-219ENST00000541341 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
CHFR-219ENST00000541341 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
CHFR-219ENST00000541341 PKHD1P08F94 4074 aa6.87□□□□□ -1.31
CHFR-219ENST00000541341 M0R2N4 97 aa6.87□□□□□ -1.31
CHFR-219ENST00000541341 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
CHFR-219ENST00000541341 C1orf43Q9BWL3 253 aa6.87□□□□□ -1.31
CHFR-219ENST00000541341 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
CHFR-219ENST00000541341 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
CHFR-219ENST00000541341 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
CHFR-219ENST00000541341 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
CHFR-219ENST00000541341 KLK12Q9UKR0 248 aa6.86□□□□□ -1.31
CHFR-219ENST00000541341 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
CHFR-219ENST00000541341 Q6ZTC4 211 aa6.85□□□□□ -1.31
CHFR-219ENST00000541341 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
CHFR-219ENST00000541341 H3BPC8 53 aa6.84□□□□□ -1.31
CHFR-219ENST00000541341 FP248Q71RG6 208 aaPredicted RBP6.84□□□□□ -1.31
CHFR-219ENST00000541341 A0A096LPF7 62 aa6.83□□□□□ -1.32
CHFR-219ENST00000541341 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
CHFR-219ENST00000541341 TLX1NBP0CAT3 122 aa6.82□□□□□ -1.32
CHFR-219ENST00000541341 Q1T7F1 81 aa6.82□□□□□ -1.32
CHFR-219ENST00000541341 RPL37AP8A6NKH3 93 aa6.81□□□□□ -1.32
CHFR-219ENST00000541341 Q8NDZ9 215 aa6.81□□□□□ -1.32
CHFR-219ENST00000541341 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
CHFR-219ENST00000541341 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms