RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PSCAO43653 123 aa5.48□□□□□ -1.53
CHD4-208ENST00000540960 DNAL4O96015 105 aa5.48□□□□□ -1.53
CHD4-208ENST00000540960 C15orf56Q8N910 161 aa5.48□□□□□ -1.53
CHD4-208ENST00000540960 C6orf48Q9UBA6 75 aa5.48□□□□□ -1.53
CHD4-208ENST00000540960 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
CHD4-208ENST00000540960 C9JAW5 83 aa5.47□□□□□ -1.53
CHD4-208ENST00000540960 SLC25A20O43772 301 aa5.47□□□□□ -1.53
CHD4-208ENST00000540960 OXTP01178 125 aa5.47□□□□□ -1.53
CHD4-208ENST00000540960 OCIAD2Q56VL3 154 aa5.47□□□□□ -1.53
CHD4-208ENST00000540960 ANKRD29Q8N6D5 301 aa5.47□□□□□ -1.53
CHD4-208ENST00000540960 IGKV2-28A0A075B6P5 120 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 USP17L23D6RBM5 183 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 M0R378 163 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 EIF4EBP3O60516 100 aaPredicted RBP5.46□□□□□ -1.54
CHD4-208ENST00000540960 IGKV2D-28P01615 120 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 HIGD2BQ4VC39 106 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 TEN1Q86WV5 123 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 LINC00337Q8N6G1 96 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 PPDPFLQ8WWR9 84 aa5.46□□□□□ -1.54
CHD4-208ENST00000540960 LOC107984640A0A0U1RRK4 108 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 C21orf62-AS1Q17RA5 79 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 C10orf25Q5T742 122 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 Q6ZRU5 148 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 SMIM11BQ8TCY0 68 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 PRO0461Q9UI25 63 aa5.45□□□□□ -1.54
CHD4-208ENST00000540960 WFDC2Q14508 124 aa5.44□□□□□ -1.54
CHD4-208ENST00000540960 NKAPP1Q8N9T2 125 aa5.44□□□□□ -1.54
CHD4-208ENST00000540960 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
CHD4-208ENST00000540960 CNBPP62633 177 aaKnown RBP5.43□□□□□ -1.54
CHD4-208ENST00000540960 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
CHD4-208ENST00000540960 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
CHD4-208ENST00000540960 ETDBQ3ZM63 59 aa5.42□□□□□ -1.54
CHD4-208ENST00000540960 DIRC1Q969H9 104 aa5.42□□□□□ -1.54
CHD4-208ENST00000540960 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
CHD4-208ENST00000540960 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
CHD4-208ENST00000540960 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
CHD4-208ENST00000540960 BAALC-AS2P0C853 105 aa5.41□□□□□ -1.54
CHD4-208ENST00000540960 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
CHD4-208ENST00000540960 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
CHD4-208ENST00000540960 CLEC2BQ92478 149 aa5.41□□□□□ -1.54
CHD4-208ENST00000540960 TNXBP22105 4242 aa5.41□□□□□ -1.54
CHD4-208ENST00000540960 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 TMEM256-PLSCR3K7ERE1 68 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 NCR3O14931 201 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 ACYP1P07311 99 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 VPREB1P12018 145 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 RPL18AQ02543 176 aaKnown RBP5.4□□□□□ -1.54
CHD4-208ENST00000540960 GAGE2EQ4V326 116 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 ORMDL1Q9P0S3 153 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 GAGE2DQ9UEU5 116 aa5.4□□□□□ -1.54
CHD4-208ENST00000540960 KRTAP10-4P60372 401 aaPredicted RBP5.39□□□□□ -1.55
CHD4-208ENST00000540960 C6orf99Q4VX62 202 aa5.39□□□□□ -1.55
CHD4-208ENST00000540960 VPS25Q9BRG1 176 aa5.39□□□□□ -1.55
CHD4-208ENST00000540960 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
CHD4-208ENST00000540960 hADV29S1A0JD25 119 aa5.38□□□□□ -1.55
CHD4-208ENST00000540960 JMJD7-PLA2G4BH0Y9G9 81 aa5.38□□□□□ -1.55
CHD4-208ENST00000540960 ZNF73O43830 326 aaPredicted RBP5.38□□□□□ -1.55
CHD4-208ENST00000540960 COX7BP24311 80 aa5.38□□□□□ -1.55
CHD4-208ENST00000540960 Q6ZRP5 223 aa5.38□□□□□ -1.55
CHD4-208ENST00000540960 Q8N814 137 aa5.38□□□□□ -1.55
CHD4-208ENST00000540960 TRBV10-3A0A0K0K1G6 114 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 FAM240AA0A1B0GVK7 77 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 PRYO14603 147 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 LECT2O14960 151 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.37□□□□□ -1.55
CHD4-208ENST00000540960 LINC00575Q6W349 94 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
CHD4-208ENST00000540960 LINC00167Q96N53 147 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
CHD4-208ENST00000540960 PDE6GP18545 87 aa5.36□□□□□ -1.55
CHD4-208ENST00000540960 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
CHD4-208ENST00000540960 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
CHD4-208ENST00000540960 DHRS4-AS1Q9P1J3 65 aa5.36□□□□□ -1.55
CHD4-208ENST00000540960 ELOF1P60002 83 aaKnown RBP5.35□□□□□ -1.55
CHD4-208ENST00000540960 MTURNQ8N3F0 131 aa5.35□□□□□ -1.55
CHD4-208ENST00000540960 C9orf129Q5T035 196 aaKnown RBP5.34□□□□□ -1.55
CHD4-208ENST00000540960 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
CHD4-208ENST00000540960 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
CHD4-208ENST00000540960 A0A087WYN8 130 aa5.33□□□□□ -1.56
CHD4-208ENST00000540960 ETDCA0A1B0GVM5 59 aa5.33□□□□□ -1.56
CHD4-208ENST00000540960 SLPIP03973 132 aa5.33□□□□□ -1.56
CHD4-208ENST00000540960 FAM218AQ96MZ4 157 aa5.33□□□□□ -1.56
CHD4-208ENST00000540960 LRCOL1A6NCL2 159 aa5.32□□□□□ -1.56
CHD4-208ENST00000540960 C7orf33Q8WU49 177 aa5.32□□□□□ -1.56
CHD4-208ENST00000540960 C22orf24Q9Y442 160 aa5.32□□□□□ -1.56
CHD4-208ENST00000540960 LPAP08519 4548 aa5.32□□□□□ -1.56
CHD4-208ENST00000540960 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
CHD4-208ENST00000540960 TEX49A0A1B0GTD5 131 aa5.31□□□□□ -1.56
CHD4-208ENST00000540960 Q8NDZ9 215 aa5.31□□□□□ -1.56
CHD4-208ENST00000540960 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
CHD4-208ENST00000540960 A0A087WTM6 91 aa5.3□□□□□ -1.56
CHD4-208ENST00000540960 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
CHD4-208ENST00000540960 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
CHD4-208ENST00000540960 SPRR1AP35321 89 aa5.29□□□□□ -1.56
CHD4-208ENST00000540960 RBM3P98179 157 aaKnown RBP5.29□□□□□ -1.56
CHD4-208ENST00000540960 REG3GQ6UW15 175 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms